RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 C8orf76Q96K31 380 aa20.8■□□□□ 0.92
LITAF-220ENST00000620789 PKD2L1Q9P0L9 805 aa20.8■□□□□ 0.92
LITAF-220ENST00000620789 CCDC194A0A1B0GVG4 234 aa20.79■□□□□ 0.92
LITAF-220ENST00000620789 ARVCFO00192 962 aa20.79■□□□□ 0.92
LITAF-220ENST00000620789 NOP56O00567 594 aaKnown RBP20.79■□□□□ 0.92
LITAF-220ENST00000620789 PPFIA4O75335 1185 aa20.79■□□□□ 0.92
LITAF-220ENST00000620789 CDK7P50613 346 aa20.79■□□□□ 0.92
LITAF-220ENST00000620789 PSMC6P62333 389 aa20.79■□□□□ 0.92
LITAF-220ENST00000620789 SETQ01105 290 aaPredicted RBP20.79■□□□□ 0.92
LITAF-220ENST00000620789 ITGA7Q13683 1181 aa20.79■□□□□ 0.92
LITAF-220ENST00000620789 SLC43A3Q8NBI5 491 aa20.79■□□□□ 0.92
LITAF-220ENST00000620789 SEZ6LQ9BYH1 1024 aa20.79■□□□□ 0.92
LITAF-220ENST00000620789 AGO4Q9HCK5 861 aaKnown RBP20.79■□□□□ 0.92
LITAF-220ENST00000620789 GRIN2DO15399 1336 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 SCN10AQ9Y5Y9 1956 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 TLE2Q04725 743 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 NR5A1Q13285 461 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 INF2Q27J81 1249 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 PRR16Q569H4 304 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 ANKRD33Q7Z3H0 272 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 DIS3L2Q8IYB7 885 aaKnown RBP20.78■□□□□ 0.92
LITAF-220ENST00000620789 TNFRSF25Q93038 417 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 GPR20Q99678 358 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 NFASCO94856 1347 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 MROH7Q68CQ1 1323 aa20.78■□□□□ 0.92
LITAF-220ENST00000620789 BTBD18B2RXH4 712 aa20.77■□□□□ 0.92
LITAF-220ENST00000620789 PQBP1O60828 265 aaKnown RBP20.77■□□□□ 0.92
LITAF-220ENST00000620789 GUCY1B3Q02153 619 aa20.77■□□□□ 0.92
LITAF-220ENST00000620789 SP4Q02446 784 aa20.77■□□□□ 0.92
LITAF-220ENST00000620789 ITGB3BPQ13352 177 aaPredicted RBP20.77■□□□□ 0.92
LITAF-220ENST00000620789 PIK3AP1Q6ZUJ8 805 aa20.77■□□□□ 0.92
LITAF-220ENST00000620789 FBXO18Q8NFZ0 1043 aa20.77■□□□□ 0.92
LITAF-220ENST00000620789 KAT2BQ92831 832 aa20.77■□□□□ 0.92
LITAF-220ENST00000620789 LENG9Q96B70 501 aa20.77■□□□□ 0.92
LITAF-220ENST00000620789 TOX2Q96NM4 488 aa20.77■□□□□ 0.92
LITAF-220ENST00000620789 SDF4Q9BRK5 362 aa20.77■□□□□ 0.92
LITAF-220ENST00000620789 KIF3AQ9Y496 699 aa20.77■□□□□ 0.92
LITAF-220ENST00000620789 CYP3A7-CYP3A51PA0A087WV96 503 aa20.76■□□□□ 0.91
LITAF-220ENST00000620789 F2P00734 622 aa20.76■□□□□ 0.91
LITAF-220ENST00000620789 ZNF286BP0CG31 522 aa20.76■□□□□ 0.91
LITAF-220ENST00000620789 CYP3A7P24462 503 aa20.76■□□□□ 0.91
LITAF-220ENST00000620789 SAFBQ15424 915 aaKnown RBP eCLIP20.76■□□□□ 0.91
LITAF-220ENST00000620789 EARS2Q5JPH6 523 aaKnown RBP20.76■□□□□ 0.91
LITAF-220ENST00000620789 MOXD1Q6UVY6 613 aa20.76■□□□□ 0.91
LITAF-220ENST00000620789 ZNF577Q9BSK1 485 aa20.76■□□□□ 0.91
LITAF-220ENST00000620789 JPH1Q9HDC5 661 aaPredicted RBP20.76■□□□□ 0.91
LITAF-220ENST00000620789 SLC9A2Q9UBY0 812 aa20.76■□□□□ 0.91
LITAF-220ENST00000620789 TELO2Q9Y4R8 837 aa20.76■□□□□ 0.91
LITAF-220ENST00000620789 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.76■□□□□ 0.91
LITAF-220ENST00000620789 CEP290O15078 2479 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 DCDC2CA8MYV0 355 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 H0YGN5 161 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 IPO5O00410 1097 aaKnown RBP20.75■□□□□ 0.91
LITAF-220ENST00000620789 TDP2O95551 362 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 GJB2P29033 226 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 CUL4AQ13619 759 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 NBPF20Q3BBV1 942 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 Q4G0T1 1027 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 NEK8Q86SG6 692 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 C16orf70Q9BSU1 422 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 KATNAL1Q9BW62 490 aa20.75■□□□□ 0.91
LITAF-220ENST00000620789 FAM205CA6NFA0 338 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 LGALS2P05162 132 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 CLTBP09497 229 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 PSEN2P49810 448 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 LETM2Q2VYF4 491 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 PRPF38BQ5VTL8 546 aaKnown RBP20.74■□□□□ 0.91
LITAF-220ENST00000620789 NFRKBQ6P4R8 1299 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 FAM126BQ8IXS8 530 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 SEPT1Q8WYJ6 367 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 MBOAT7Q96N66 472 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 PDLIM7Q9NR12 457 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 TBC1D22BQ9NU19 505 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 ZMYND8Q9ULU4 1186 aaPredicted RBP20.74■□□□□ 0.91
LITAF-220ENST00000620789 SMC3Q9UQE7 1217 aa20.74■□□□□ 0.91
LITAF-220ENST00000620789 GSTTP1A0A1W2PQM5 241 aa20.73■□□□□ 0.91
LITAF-220ENST00000620789 HAS3O00219 553 aa20.73■□□□□ 0.91
LITAF-220ENST00000620789 TLR3O15455 904 aaKnown RBP20.73■□□□□ 0.91
LITAF-220ENST00000620789 MSH4O15457 936 aa20.73■□□□□ 0.91
LITAF-220ENST00000620789 DHX15O43143 795 aaKnown RBP20.73■□□□□ 0.91
LITAF-220ENST00000620789 SYN1P17600 705 aa20.73■□□□□ 0.91
LITAF-220ENST00000620789 TCF7P36402 384 aaPredicted RBP20.73■□□□□ 0.91
LITAF-220ENST00000620789 CHMP4BP1P59074 171 aa20.73■□□□□ 0.91
LITAF-220ENST00000620789 FAAP100Q0VG06 881 aa20.73■□□□□ 0.91
LITAF-220ENST00000620789 MFSD10Q14728 455 aa20.73■□□□□ 0.91
LITAF-220ENST00000620789 SNX21Q969T3 373 aa20.73■□□□□ 0.91
LITAF-220ENST00000620789 NAP1L4Q99733 375 aaKnown RBP20.73■□□□□ 0.91
LITAF-220ENST00000620789 PRKAG2Q9UGJ0 569 aa20.73■□□□□ 0.91
LITAF-220ENST00000620789 H3BRB1 525 aa20.72■□□□□ 0.91
LITAF-220ENST00000620789 K7ELQ4 463 aaPredicted RBP20.72■□□□□ 0.91
LITAF-220ENST00000620789 CD4P01730 458 aa20.72■□□□□ 0.91
LITAF-220ENST00000620789 GCFC2P16383 781 aaKnown RBP20.72■□□□□ 0.91
LITAF-220ENST00000620789 ACTR2P61160 394 aa20.72■□□□□ 0.91
LITAF-220ENST00000620789 PTPN11Q06124 597 aaPredicted RBP20.72■□□□□ 0.91
LITAF-220ENST00000620789 KIAA0753Q2KHM9 967 aa20.72■□□□□ 0.91
LITAF-220ENST00000620789 FAM47CQ5HY64 1035 aa20.72■□□□□ 0.91
LITAF-220ENST00000620789 PPP4R3AQ6IN85 833 aa20.72■□□□□ 0.91
LITAF-220ENST00000620789 PPP1R13LQ8WUF5 828 aa20.72■□□□□ 0.91
LITAF-220ENST00000620789 UIMC1Q96RL1 719 aa20.72■□□□□ 0.91
LITAF-220ENST00000620789 FOXP1Q9H334 677 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms