RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 SENP7Q9BQF6 1050 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 RBM28Q9NW13 759 aaKnown RBP27.59■■■□□ 2.01
ATXN3-252ENST00000620536 CHD9Q3L8U1 2897 aa27.59■■■□□ 2.01
ATXN3-252ENST00000620536 SPDYE3A6NKU9 549 aa27.58■■■□□ 2.01
ATXN3-252ENST00000620536 NBNO60934 754 aa27.58■■■□□ 2.01
ATXN3-252ENST00000620536 CXCL10P02778 98 aa27.58■■■□□ 2.01
ATXN3-252ENST00000620536 EXOSC10Q01780 885 aaKnown RBP27.58■■■□□ 2.01
ATXN3-252ENST00000620536 ADGRE1Q14246 886 aa27.58■■■□□ 2.01
ATXN3-252ENST00000620536 HIC1Q14526 733 aa27.58■■■□□ 2.01
ATXN3-252ENST00000620536 TRIM71Q2Q1W2 868 aaKnown RBP27.58■■■□□ 2.01
ATXN3-252ENST00000620536 TSGA10IPQ3SY00 556 aa27.58■■■□□ 2.01
ATXN3-252ENST00000620536 APOA5Q6Q788 366 aa27.58■■■□□ 2.01
ATXN3-252ENST00000620536 ATP6V0A1Q93050 837 aa27.58■■■□□ 2.01
ATXN3-252ENST00000620536 SMIM10L2AP0DMW4 78 aa27.57■■■□□ 2
ATXN3-252ENST00000620536 SMIM10L2BP0DMW5 78 aa27.57■■■□□ 2
ATXN3-252ENST00000620536 UBE2SQ16763 222 aa27.57■■■□□ 2
ATXN3-252ENST00000620536 SERINC5Q86VE9 423 aa27.57■■■□□ 2
ATXN3-252ENST00000620536 WNT8BQ93098 351 aa27.57■■■□□ 2
ATXN3-252ENST00000620536 CDHR1Q96JP9 859 aa27.57■■■□□ 2
ATXN3-252ENST00000620536 TCEANC2Q96MN5 208 aa27.57■■■□□ 2
ATXN3-252ENST00000620536 ZNF215Q9UL58 517 aaPredicted RBP27.57■■■□□ 2
ATXN3-252ENST00000620536 ZBTB43O43298 467 aa27.56■■■□□ 2
ATXN3-252ENST00000620536 THPOP40225 353 aa27.56■■■□□ 2
ATXN3-252ENST00000620536 WDR5P61964 334 aaKnown RBP27.56■■■□□ 2
ATXN3-252ENST00000620536 SP4Q02446 784 aa27.56■■■□□ 2
ATXN3-252ENST00000620536 UTP14CQ5TAP6 766 aaKnown RBP27.56■■■□□ 2
ATXN3-252ENST00000620536 RASEFQ8IZ41 740 aa27.56■■■□□ 2
ATXN3-252ENST00000620536 GPRASP2Q96D09 838 aa27.56■■■□□ 2
ATXN3-252ENST00000620536 EHMT1Q9H9B1 1298 aa27.56■■■□□ 2
ATXN3-252ENST00000620536 ABHD14A-ACY1A0A1B0GW23 586 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 TLL1O43897 1013 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 HMGB1P09429 215 aaKnown RBP27.55■■■□□ 2
ATXN3-252ENST00000620536 GNAT1P11488 350 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 IKBKEQ14164 716 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 CCDC85BQ15834 202 aaPredicted RBP27.55■■■□□ 2
ATXN3-252ENST00000620536 RTN1Q16799 776 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 ADCK5Q3MIX3 580 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 CCDC136Q96JN2 1154 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 ZBED2Q9BTP6 218 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 RNPEPQ9H4A4 650 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 PCDHA6Q9UN73 950 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 PCDHA8Q9Y5H6 950 aa27.55■■■□□ 2
ATXN3-252ENST00000620536 RSPH10B2B2RC85 870 aa27.54■■■□□ 2
ATXN3-252ENST00000620536 EFCAB14O75071 495 aa27.54■■■□□ 2
ATXN3-252ENST00000620536 RSPH10BP0C881 870 aa27.54■■■□□ 2
ATXN3-252ENST00000620536 FGD1P98174 961 aa27.54■■■□□ 2
ATXN3-252ENST00000620536 TRAF7Q6Q0C0 670 aa27.54■■■□□ 2
ATXN3-252ENST00000620536 EMSYQ7Z589 1322 aa27.54■■■□□ 2
ATXN3-252ENST00000620536 BRPF3Q9ULD4 1205 aa27.54■■■□□ 2
ATXN3-252ENST00000620536 TRIP12Q14669 1992 aaPredicted RBP27.53■■■□□ 2
ATXN3-252ENST00000620536 CNTNAP5Q8WYK1 1306 aa27.53■■■□□ 2
ATXN3-252ENST00000620536 TREHO43280 583 aa27.53■■■□□ 2
ATXN3-252ENST00000620536 HOXC8P31273 242 aa27.53■■■□□ 2
ATXN3-252ENST00000620536 MTMR1Q13613 665 aa27.53■■■□□ 2
ATXN3-252ENST00000620536 CERS4Q9HA82 394 aa27.53■■■□□ 2
ATXN3-252ENST00000620536 PRUNE2Q8WUY3 3088 aa27.53■■■□□ 2
ATXN3-252ENST00000620536 KLF18A0A0U1RQI7 1052 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 GOLGA8AA7E2F4 631 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 GOLGA8BA8MQT2 603 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 LGR5O75473 907 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 ITGB5P18084 799 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 NAPAP54920 295 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 WWC2Q6AWC2 1192 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 TRIM50Q86XT4 487 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 SYMPKQ92797 1274 aaKnown RBP27.52■■■□□ 2
ATXN3-252ENST00000620536 SETD4Q9NVD3 440 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 NAP1L2Q9ULW6 460 aaPredicted RBP27.52■■■□□ 2
ATXN3-252ENST00000620536 TELO2Q9Y4R8 837 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 UBIAD1Q9Y5Z9 338 aa27.52■■■□□ 2
ATXN3-252ENST00000620536 V9GY48 417 aaPredicted RBP27.52■■■□□ 2
ATXN3-252ENST00000620536 MAFGO15525 162 aa27.51■■□□□ 1.99
ATXN3-252ENST00000620536 ATP9AO75110 1047 aa27.51■■□□□ 1.99
ATXN3-252ENST00000620536 DEFB103AP81534 67 aa27.51■■□□□ 1.99
ATXN3-252ENST00000620536 TAP1Q03518 808 aa27.51■■□□□ 1.99
ATXN3-252ENST00000620536 MBTPS1Q14703 1052 aa27.51■■□□□ 1.99
ATXN3-252ENST00000620536 PRDM6Q9NQX0 595 aa27.51■■□□□ 1.99
ATXN3-252ENST00000620536 KCNA2P16389 499 aa27.5■■□□□ 1.99
ATXN3-252ENST00000620536 TCF7P36402 384 aaPredicted RBP27.5■■□□□ 1.99
ATXN3-252ENST00000620536 TCTN1Q2MV58 587 aa27.5■■□□□ 1.99
ATXN3-252ENST00000620536 PPP1R18Q6NYC8 613 aa27.5■■□□□ 1.99
ATXN3-252ENST00000620536 TMCO2Q7Z6W1 182 aaPredicted RBP27.5■■□□□ 1.99
ATXN3-252ENST00000620536 TEX2Q8IWB9 1127 aa27.5■■□□□ 1.99
ATXN3-252ENST00000620536 MICALL1Q8N3F8 863 aa27.5■■□□□ 1.99
ATXN3-252ENST00000620536 ARNTL2Q8WYA1 636 aa27.5■■□□□ 1.99
ATXN3-252ENST00000620536 SEPT1Q8WYJ6 367 aa27.5■■□□□ 1.99
ATXN3-252ENST00000620536 RIC8AQ9NPQ8 531 aa27.5■■□□□ 1.99
ATXN3-252ENST00000620536 JADE2Q9NQC1 790 aa27.5■■□□□ 1.99
ATXN3-252ENST00000620536 PKD2L1Q9P0L9 805 aa27.5■■□□□ 1.99
ATXN3-252ENST00000620536 hCG_1984214I3L0E3 225 aa27.49■■□□□ 1.99
ATXN3-252ENST00000620536 GTPBP6O43824 516 aaPredicted RBP27.49■■□□□ 1.99
ATXN3-252ENST00000620536 CAND2O75155 1236 aa27.49■■□□□ 1.99
ATXN3-252ENST00000620536 ARHGAP4P98171 946 aa27.49■■□□□ 1.99
ATXN3-252ENST00000620536 ZNF713Q8N859 430 aaPredicted RBP27.49■■□□□ 1.99
ATXN3-252ENST00000620536 TSPYL2Q9H2G4 693 aaPredicted RBP27.49■■□□□ 1.99
ATXN3-252ENST00000620536 NRCAMQ92823 1304 aa27.48■■□□□ 1.99
ATXN3-252ENST00000620536 RFXAPO00287 272 aa27.48■■□□□ 1.99
ATXN3-252ENST00000620536 FOSP01100 380 aaPredicted RBP27.48■■□□□ 1.99
ATXN3-252ENST00000620536 ADCY7P51828 1080 aa27.48■■□□□ 1.99
ATXN3-252ENST00000620536 RCAN1P53805 252 aa27.48■■□□□ 1.99
ATXN3-252ENST00000620536 FUT2Q10981 343 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms