RNA–Protein interactions for RNA: ENST00000619449.1

MALAT1-215, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 794 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-215ENST00000619449 NFASCO94856 1347 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 KIF28PB7ZC32 967 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 DHX15O43143 795 aaKnown RBP20.63■□□□□ 0.89
MALAT1-215ENST00000619449 TDP2O95551 362 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 MMP3P08254 477 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 ZNF76P36508 570 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 PURAQ00577 322 aaKnown RBP20.63■□□□□ 0.89
MALAT1-215ENST00000619449 SETQ01105 290 aaPredicted RBP20.63■□□□□ 0.89
MALAT1-215ENST00000619449 SNX17Q15036 470 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 PPP4R3AQ6IN85 833 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 CYFIP1Q7L576 1253 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 NEK8Q86SG6 692 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 HSCBQ8IWL3 235 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 ALPK3Q96L96 1907 aa20.63■□□□□ 0.89
MALAT1-215ENST00000619449 WNT7AO00755 349 aa20.62■□□□□ 0.89
MALAT1-215ENST00000619449 SAFBQ15424 915 aaKnown RBP eCLIP20.62■□□□□ 0.89
MALAT1-215ENST00000619449 PRR16Q569H4 304 aa20.62■□□□□ 0.89
MALAT1-215ENST00000619449 C1orf53Q5VUE5 145 aa20.62■□□□□ 0.89
MALAT1-215ENST00000619449 GIMAP8Q8ND71 665 aaPredicted RBP20.62■□□□□ 0.89
MALAT1-215ENST00000619449 SENP6Q9GZR1 1112 aaPredicted RBP20.62■□□□□ 0.89
MALAT1-215ENST00000619449 GRIN2DO15399 1336 aa20.61■□□□□ 0.89
MALAT1-215ENST00000619449 ELP1O95163 1332 aa20.61■□□□□ 0.89
MALAT1-215ENST00000619449 MYCNP04198 464 aaPredicted RBP20.61■□□□□ 0.89
MALAT1-215ENST00000619449 CXCL17Q6UXB2 119 aa20.61■□□□□ 0.89
MALAT1-215ENST00000619449 FERMT2Q96AC1 680 aa20.61■□□□□ 0.89
MALAT1-215ENST00000619449 SPATA33Q96N06 139 aa20.61■□□□□ 0.89
MALAT1-215ENST00000619449 GPR20Q99678 358 aa20.61■□□□□ 0.89
MALAT1-215ENST00000619449 MLXIPQ9HAP2 919 aa20.61■□□□□ 0.89
MALAT1-215ENST00000619449 SCN10AQ9Y5Y9 1956 aa20.61■□□□□ 0.89
MALAT1-215ENST00000619449 IPO5O00410 1097 aaKnown RBP20.6■□□□□ 0.89
MALAT1-215ENST00000619449 MSH4O15457 936 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 SLC37A4O43826 429 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 ZEB2O60315 1214 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 SORBS3O60504 671 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 KPNA6O60684 536 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 PPFIA4O75335 1185 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 CABYRO75952 493 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 LETM2Q2VYF4 491 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 LARP1BQ659C4 914 aaKnown RBP20.6■□□□□ 0.89
MALAT1-215ENST00000619449 SLC39A5Q6ZMH5 540 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 NOSTRINQ8IVI9 506 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 SLC43A3Q8NBI5 491 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 ETNPPLQ8TBG4 499 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 KAT2BQ92831 832 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 POLR3EQ9NVU0 708 aa20.6■□□□□ 0.89
MALAT1-215ENST00000619449 GSTTP1A0A1W2PQM5 241 aa20.59■□□□□ 0.89
MALAT1-215ENST00000619449 GCFC2P16383 781 aaKnown RBP20.59■□□□□ 0.89
MALAT1-215ENST00000619449 CDK7P50613 346 aa20.59■□□□□ 0.89
MALAT1-215ENST00000619449 DGKDQ16760 1214 aa20.59■□□□□ 0.89
MALAT1-215ENST00000619449 LRRC26Q2I0M4 334 aa20.59■□□□□ 0.89
MALAT1-215ENST00000619449 BRDTQ58F21 947 aaPredicted RBP20.59■□□□□ 0.89
MALAT1-215ENST00000619449 SLC5A5Q92911 643 aa20.59■□□□□ 0.89
MALAT1-215ENST00000619449 KCNMB3Q9NPA1 279 aa20.59■□□□□ 0.89
MALAT1-215ENST00000619449 PKD2L1Q9P0L9 805 aa20.59■□□□□ 0.89
MALAT1-215ENST00000619449 ATG7O95352 703 aa20.58■□□□□ 0.89
MALAT1-215ENST00000619449 CCNE2O96020 404 aa20.58■□□□□ 0.89
MALAT1-215ENST00000619449 B3GNT9Q6UX72 402 aa20.58■□□□□ 0.89
MALAT1-215ENST00000619449 GLT1D1Q96MS3 346 aa20.58■□□□□ 0.89
MALAT1-215ENST00000619449 ZNF577Q9BSK1 485 aa20.58■□□□□ 0.89
MALAT1-215ENST00000619449 C16orf70Q9BSU1 422 aa20.58■□□□□ 0.89
MALAT1-215ENST00000619449 MTG1Q9BT17 334 aaPredicted RBP20.58■□□□□ 0.89
MALAT1-215ENST00000619449 JPH1Q9HDC5 661 aaPredicted RBP20.58■□□□□ 0.89
MALAT1-215ENST00000619449 STARD7Q9NQZ5 370 aa20.58■□□□□ 0.89
MALAT1-215ENST00000619449 SLC9A2Q9UBY0 812 aa20.58■□□□□ 0.89
MALAT1-215ENST00000619449 HAS3O00219 553 aa20.57■□□□□ 0.88
MALAT1-215ENST00000619449 PSMD10O75832 226 aa20.57■□□□□ 0.88
MALAT1-215ENST00000619449 F2P00734 622 aa20.57■□□□□ 0.88
MALAT1-215ENST00000619449 MYL3P08590 195 aa20.57■□□□□ 0.88
MALAT1-215ENST00000619449 SYT1P21579 422 aa20.57■□□□□ 0.88
MALAT1-215ENST00000619449 RIT2Q99578 217 aa20.57■□□□□ 0.88
MALAT1-215ENST00000619449 NAP1L4Q99733 375 aaKnown RBP20.57■□□□□ 0.88
MALAT1-215ENST00000619449 TBC1D22BQ9NU19 505 aa20.57■□□□□ 0.88
MALAT1-215ENST00000619449 FOXD4L1Q9NU39 408 aa20.57■□□□□ 0.88
MALAT1-215ENST00000619449 DDX25Q9UHL0 483 aaKnown RBP20.57■□□□□ 0.88
MALAT1-215ENST00000619449 CCNT1O60563 726 aaKnown RBP20.56■□□□□ 0.88
MALAT1-215ENST00000619449 TOB1P50616 345 aaPredicted RBP20.56■□□□□ 0.88
MALAT1-215ENST00000619449 ATN1P54259 1190 aaPredicted RBP20.56■□□□□ 0.88
MALAT1-215ENST00000619449 SEPT1Q8WYJ6 367 aa20.56■□□□□ 0.88
MALAT1-215ENST00000619449 HAS1Q92839 578 aa20.56■□□□□ 0.88
MALAT1-215ENST00000619449 GJA10Q969M2 543 aa20.56■□□□□ 0.88
MALAT1-215ENST00000619449 UIMC1Q96RL1 719 aa20.56■□□□□ 0.88
MALAT1-215ENST00000619449 SDF4Q9BRK5 362 aa20.56■□□□□ 0.88
MALAT1-215ENST00000619449 IGKV6D-21A0A0A0MT36 114 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 A0A0U1RQG5 324 aaPredicted RBP20.55■□□□□ 0.88
MALAT1-215ENST00000619449 H3BQV1 296 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 TBX3O15119 743 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 LGR5O75473 907 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 LGALS2P05162 132 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 PDCP20941 246 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 TRAPPC10P48553 1259 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 ACTR2P61160 394 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 PSMC6P62333 389 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 PCYT2Q99447 389 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 HTATIP2Q9BUP3 242 aa20.55■□□□□ 0.88
MALAT1-215ENST00000619449 ARVCFO00192 962 aa20.54■□□□□ 0.88
MALAT1-215ENST00000619449 NOP56O00567 594 aaKnown RBP20.54■□□□□ 0.88
MALAT1-215ENST00000619449 ZNF286BP0CG31 522 aa20.54■□□□□ 0.88
MALAT1-215ENST00000619449 TCF7P36402 384 aaPredicted RBP20.54■□□□□ 0.88
MALAT1-215ENST00000619449 RTP1P59025 263 aa20.54■□□□□ 0.88
MALAT1-215ENST00000619449 MLLT1Q03111 559 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms