RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 SRPRBQ9Y5M8 271 aaKnown RBP24.3■■□□□ 1.48
SGMS1-210ENST00000619438 MCM3APO60318 1980 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 LOC102724159A0A0B4J2E5 919 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 EVI5O60447 810 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 PWP2Q15269 919 aaKnown RBP24.3■■□□□ 1.48
SGMS1-210ENST00000619438 LRRC41Q15345 812 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 SYTL5Q8TDW5 730 aaPredicted RBP24.3■■□□□ 1.48
SGMS1-210ENST00000619438 TNFRSF25Q93038 417 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 LENG1Q96BZ8 264 aaPredicted RBP24.3■■□□□ 1.48
SGMS1-210ENST00000619438 CLIC6Q96NY7 704 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 SPC25Q9HBM1 224 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 VPS54Q9P1Q0 977 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 KCNH3Q9ULD8 1083 aa24.3■■□□□ 1.48
SGMS1-210ENST00000619438 DUSP11O75319 330 aaKnown RBP24.29■■□□□ 1.48
SGMS1-210ENST00000619438 TNFAIP2Q03169 654 aa24.29■■□□□ 1.48
SGMS1-210ENST00000619438 FBXO16Q8IX29 292 aaPredicted RBP24.29■■□□□ 1.48
SGMS1-210ENST00000619438 TAAR1Q96RJ0 339 aa24.29■■□□□ 1.48
SGMS1-210ENST00000619438 BAZ2BQ9UIF8 2168 aaKnown RBP24.29■■□□□ 1.48
SGMS1-210ENST00000619438 MORC4Q8TE76 937 aa24.28■■□□□ 1.48
SGMS1-210ENST00000619438 NSUN6Q8TEA1 469 aaKnown RBP24.28■■□□□ 1.48
SGMS1-210ENST00000619438 RMDN3Q96TC7 470 aa24.28■■□□□ 1.48
SGMS1-210ENST00000619438 KATNBL1Q9H079 304 aa24.28■■□□□ 1.48
SGMS1-210ENST00000619438 VTA1Q9NP79 307 aa24.28■■□□□ 1.48
SGMS1-210ENST00000619438 FAM13BQ9NYF5 915 aa24.28■■□□□ 1.48
SGMS1-210ENST00000619438 MAP3K20Q9NYL2 800 aaKnown RBP24.28■■□□□ 1.48
SGMS1-210ENST00000619438 PCDHB6Q9Y5E3 794 aa24.28■■□□□ 1.48
SGMS1-210ENST00000619438 NR2E3Q9Y5X4 410 aa24.28■■□□□ 1.48
SGMS1-210ENST00000619438 COL6A1P12109 1028 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 SCG2P13521 617 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 ADCYAP1R1P41586 468 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 NPY5RQ15761 445 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 PFKFB3Q16875 520 aaPredicted RBP24.27■■□□□ 1.48
SGMS1-210ENST00000619438 ARHGEF16Q5VV41 709 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 IQSEC1Q6DN90 963 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 KRBA2Q6ZNG9 492 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 ZNF830Q96NB3 372 aaPredicted RBP24.27■■□□□ 1.48
SGMS1-210ENST00000619438 PDGFCQ9NRA1 345 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 SPTLC3Q9NUV7 552 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 GCOM1H8Y6P7 765 aaPredicted RBP24.27■■□□□ 1.48
SGMS1-210ENST00000619438 POLR2MP0CAP2 368 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 DPCR1Q3MIW9 517 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 FAM177A1Q8N128 213 aaPredicted RBP24.27■■□□□ 1.48
SGMS1-210ENST00000619438 SAMD3Q8N6K7 520 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 SPC24Q8NBT2 197 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 ERCC4Q92889 916 aaPredicted RBP24.27■■□□□ 1.48
SGMS1-210ENST00000619438 KCNF1Q9H3M0 494 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 SH3GLB2Q9NR46 395 aa24.27■■□□□ 1.48
SGMS1-210ENST00000619438 HOOK1Q9UJC3 728 aaKnown RBP24.27■■□□□ 1.48
SGMS1-210ENST00000619438 hCG_1642624A0A1W2PR95 340 aa24.26■■□□□ 1.47
SGMS1-210ENST00000619438 C6orf222P0C671 652 aaPredicted RBP24.26■■□□□ 1.47
SGMS1-210ENST00000619438 HOXA13P31271 388 aaPredicted RBP24.26■■□□□ 1.47
SGMS1-210ENST00000619438 AOPEPQ8N6M6 819 aa24.26■■□□□ 1.47
SGMS1-210ENST00000619438 FERMT2Q96AC1 680 aa24.26■■□□□ 1.47
SGMS1-210ENST00000619438 COL20A1Q9P218 1284 aa24.26■■□□□ 1.47
SGMS1-210ENST00000619438 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.25■■□□□ 1.47
SGMS1-210ENST00000619438 H0YGN5 161 aa24.25■■□□□ 1.47
SGMS1-210ENST00000619438 OPLAHO14841 1288 aa24.25■■□□□ 1.47
SGMS1-210ENST00000619438 IKBKBO14920 756 aa24.25■■□□□ 1.47
SGMS1-210ENST00000619438 TRAPPC10P48553 1259 aa24.25■■□□□ 1.47
SGMS1-210ENST00000619438 HSD17B4P51659 736 aa24.25■■□□□ 1.47
SGMS1-210ENST00000619438 ATN1P54259 1190 aaPredicted RBP24.25■■□□□ 1.47
SGMS1-210ENST00000619438 TAPT1Q6NXT6 567 aa24.25■■□□□ 1.47
SGMS1-210ENST00000619438 NAP1L5Q96NT1 182 aaPredicted RBP24.25■■□□□ 1.47
SGMS1-210ENST00000619438 SYNRGQ9UMZ2 1314 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 SMTNL1A8MU46 457 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 EIF2AK2P19525 551 aaKnown RBP24.24■■□□□ 1.47
SGMS1-210ENST00000619438 LONRF3Q496Y0 759 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 FCHSD1Q86WN1 690 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 KIAA1524Q8TCG1 905 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 IWS1Q96ST2 819 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 WDR11Q9BZH6 1224 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 AP5M1Q9H0R1 490 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 LCTP09848 1927 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 ADCY6O43306 1168 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 ADAMTS4O75173 837 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 MDM2Q00987 491 aaPredicted RBP24.24■■□□□ 1.47
SGMS1-210ENST00000619438 NOLC1Q14978 699 aaKnown RBP eCLIP24.24■■□□□ 1.47
SGMS1-210ENST00000619438 STXBP2Q15833 593 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 GNASQ5JWF2 1037 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 CNNM3Q8NE01 707 aa24.24■■□□□ 1.47
SGMS1-210ENST00000619438 A0A087WWV3 80 aa24.23■■□□□ 1.47
SGMS1-210ENST00000619438 DYNC1LI2O43237 492 aaPredicted RBP24.23■■□□□ 1.47
SGMS1-210ENST00000619438 SMPD1P17405 629 aa24.23■■□□□ 1.47
SGMS1-210ENST00000619438 EDNRBP24530 442 aa24.23■■□□□ 1.47
SGMS1-210ENST00000619438 KANK3Q6NY19 840 aa24.23■■□□□ 1.47
SGMS1-210ENST00000619438 DRC7Q8IY82 874 aa24.23■■□□□ 1.47
SGMS1-210ENST00000619438 CUL5Q93034 780 aa24.23■■□□□ 1.47
SGMS1-210ENST00000619438 GJA9P57773 515 aa24.22■■□□□ 1.47
SGMS1-210ENST00000619438 KCNA10Q16322 511 aa24.22■■□□□ 1.47
SGMS1-210ENST00000619438 CCDC186Q7Z3E2 898 aa24.22■■□□□ 1.47
SGMS1-210ENST00000619438 HEATR3Q7Z4Q2 680 aa24.22■■□□□ 1.47
SGMS1-210ENST00000619438 C7orf61Q8IZ16 206 aa24.22■■□□□ 1.47
SGMS1-210ENST00000619438 PCSK9Q8NBP7 692 aaKnown RBP24.22■■□□□ 1.47
SGMS1-210ENST00000619438 PXMP2Q9NR77 195 aa24.22■■□□□ 1.47
SGMS1-210ENST00000619438 PTGS1P23219 599 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 TPM4P67936 248 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 GHRHRQ02643 423 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 LRRC26Q2I0M4 334 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 NT5DC1Q5TFE4 455 aa24.21■■□□□ 1.47
SGMS1-210ENST00000619438 TLK2Q86UE8 772 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms