RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 PARNO95453 639 aaKnown RBP13.36□□□□□ -0.27
MATR3-227ENST00000618441 NCALDP61601 193 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.36□□□□□ -0.27
MATR3-227ENST00000618441 LACTB2Q53H82 288 aaPredicted RBP13.36□□□□□ -0.27
MATR3-227ENST00000618441 RRAGAQ7L523 313 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 FAM133AQ8N9E0 248 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 NOX5Q96PH1 765 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 ARPC5LQ9BPX5 153 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 DENND2AQ9ULE3 1009 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 ITM2BQ9Y287 266 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 SLC4A7Q9Y6M7 1214 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 SSRP1Q08945 709 aaKnown RBP13.36□□□□□ -0.27
MATR3-227ENST00000618441 KBTBD12Q3ZCT8 623 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 TEX9Q8N6V9 391 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 MB21D1Q8N884 522 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 HELBQ8NG08 1087 aaPredicted RBP13.36□□□□□ -0.27
MATR3-227ENST00000618441 HIC2Q96JB3 615 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 GHRP10912 638 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 ISLR2Q6UXK2 745 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 TMEM110Q86TL2 294 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 PAGE5Q96GU1 130 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 TMEM237Q96Q45 408 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 ZKSCAN3Q9BRR0 538 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 CENPOQ9BU64 300 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 UBAP1Q9NZ09 502 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 SLAIN2Q9P270 581 aa13.36□□□□□ -0.27
MATR3-227ENST00000618441 DBF4Q9UBU7 674 aaPredicted RBP13.36□□□□□ -0.27
MATR3-227ENST00000618441 EXOSC10Q01780 885 aaKnown RBP13.35□□□□□ -0.27
MATR3-227ENST00000618441 NCOA7Q8NI08 942 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 P3H4Q92791 437 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 SYMPKQ92797 1274 aaKnown RBP13.35□□□□□ -0.27
MATR3-227ENST00000618441 CARD9Q9H257 536 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 GGA2Q9UJY4 613 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 MAP2P11137 1827 aaKnown RBP13.35□□□□□ -0.27
MATR3-227ENST00000618441 OPHN1O60890 802 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 CACNA2D1P54289 1103 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 CCDC85AQ96PX6 553 aaPredicted RBP13.35□□□□□ -0.27
MATR3-227ENST00000618441 AZI2Q9H6S1 392 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 COL15A1P39059 1388 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 MED23Q9ULK4 1368 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 UBR1Q8IWV7 1749 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 ZBTB43O43298 467 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 SUN1O94901 812 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 FLT3P36888 993 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 MAP7D1Q3KQU3 841 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 RBM12BQ8IXT5 1001 aaKnown RBP13.35□□□□□ -0.27
MATR3-227ENST00000618441 PAF1Q8N7H5 531 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 PAGR1Q9BTK6 254 aa13.35□□□□□ -0.27
MATR3-227ENST00000618441 TCP11X1B4DZS4 312 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 TATP17735 454 aaPredicted RBP13.34□□□□□ -0.27
MATR3-227ENST00000618441 MCL1Q07820 350 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 SEPT2Q15019 361 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 CFAP157Q5JU67 520 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 OLFML1Q6UWY5 402 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 APTXQ7Z2E3 356 aaKnown RBP13.34□□□□□ -0.27
MATR3-227ENST00000618441 NOSTRINQ8IVI9 506 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 CNKSR1Q969H4 720 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 NOC4LQ9BVI4 516 aaKnown RBP13.34□□□□□ -0.27
MATR3-227ENST00000618441 HELLSQ9NRZ9 838 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 NEURL4Q96JN8 1562 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 COPS2P61201 443 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 GFPT1Q06210 699 aaPredicted RBP13.34□□□□□ -0.27
MATR3-227ENST00000618441 WDR59Q6PJI9 974 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 ARHGAP18Q8N392 663 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 MARCH10Q8NA82 808 aaPredicted RBP13.34□□□□□ -0.27
MATR3-227ENST00000618441 CEP70Q8NHQ1 597 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 MTFR1LQ9H019 292 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 PAIP2BQ9ULR5 123 aaKnown RBP13.34□□□□□ -0.27
MATR3-227ENST00000618441 TBC1D2BQ9UPU7 963 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.34□□□□□ -0.27
MATR3-227ENST00000618441 MBD4O95243 580 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 KIF11P52732 1056 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 TRIM22Q8IYM9 498 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 TRAIPQ9BWF2 469 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 SLC12A6Q9UHW9 1150 aa13.34□□□□□ -0.27
MATR3-227ENST00000618441 CEP170BQ9Y4F5 1589 aaPredicted RBP13.33□□□□□ -0.27
MATR3-227ENST00000618441 B4E1Z4 1266 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 PALMO75781 387 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 IFIT1P09914 478 aaKnown RBP13.33□□□□□ -0.28
MATR3-227ENST00000618441 ZNF131P52739 623 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 MDM2Q00987 491 aaPredicted RBP13.33□□□□□ -0.28
MATR3-227ENST00000618441 BIRC3Q13489 604 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 DAAM2Q86T65 1068 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 TTC5Q8N0Z6 440 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 SPIRE2Q8WWL2 714 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 NMD3Q96D46 503 aaKnown RBP13.33□□□□□ -0.28
MATR3-227ENST00000618441 FAM205CA6NFA0 338 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 GNAT2P19087 354 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 PBX1P40424 430 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 GNAQP50148 359 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 CUL4BQ13620 913 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 ZNF268Q14587 947 aaPredicted RBP13.33□□□□□ -0.28
MATR3-227ENST00000618441 USPL1Q5W0Q7 1092 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 LCA5Q86VQ0 697 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 CSGALNACT2Q8N6G5 542 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 PAG1Q9NWQ8 432 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 NRXN3Q9Y4C0 1643 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 UBN2Q6ZU65 1347 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 PPP1R3GB7ZBB8 358 aa13.33□□□□□ -0.28
MATR3-227ENST00000618441 TOMM20Q15388 145 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms