RNA–Protein interactions for RNA: ENST00000618227.1

MALAT1-213, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 593 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-213ENST00000618227 DHX37Q8IY37 1157 aaKnown RBP17.86■□□□□ 0.45
MALAT1-213ENST00000618227 RDM1Q8NG50 284 aa17.86■□□□□ 0.45
MALAT1-213ENST00000618227 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.86■□□□□ 0.45
MALAT1-213ENST00000618227 UPF3AQ9H1J1 476 aaKnown RBP17.86■□□□□ 0.45
MALAT1-213ENST00000618227 SPC25Q9HBM1 224 aa17.86■□□□□ 0.45
MALAT1-213ENST00000618227 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.85■□□□□ 0.45
MALAT1-213ENST00000618227 MCM3APO60318 1980 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 MARCH6O60337 910 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 GAS7O60861 476 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 FARP2O94887 1054 aaPredicted RBP17.85■□□□□ 0.45
MALAT1-213ENST00000618227 GGPS1O95749 300 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 CCL5P13501 91 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 CNGA1P29973 690 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 FXR2P51116 673 aaKnown RBP eCLIP17.85■□□□□ 0.45
MALAT1-213ENST00000618227 KRT85P78386 507 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 ARHGAP1Q07960 439 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 ITGB3BPQ13352 177 aaPredicted RBP17.85■□□□□ 0.45
MALAT1-213ENST00000618227 PDIA5Q14554 519 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 PTPAQ15257 358 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 KIAA1217Q5T5P2 1943 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 LRCH2Q5VUJ6 765 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 FOXD4L5Q5VV16 416 aaPredicted RBP17.85■□□□□ 0.45
MALAT1-213ENST00000618227 LHX8Q68G74 356 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 ZNF746Q6NUN9 644 aaPredicted RBP17.85■□□□□ 0.45
MALAT1-213ENST00000618227 FAM173BQ6P4H8 233 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 PPTC7Q8NI37 304 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 FOXD4L4Q8WXT5 416 aaPredicted RBP17.85■□□□□ 0.45
MALAT1-213ENST00000618227 FERMT2Q96AC1 680 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 USP28Q96RU2 1077 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 TEKT3Q9BXF9 490 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 AP5M1Q9H0R1 490 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 TMEM60Q9H2L4 133 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 MLXIPQ9HAP2 919 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 JPH1Q9HDC5 661 aaPredicted RBP17.85■□□□□ 0.45
MALAT1-213ENST00000618227 TCEAL9Q9UHQ7 104 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 RCOR1Q9UKL0 485 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 PCDHA12Q9UN75 941 aa17.85■□□□□ 0.45
MALAT1-213ENST00000618227 A6NJR5 290 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 HOXD8P13378 290 aaPredicted RBP17.84■□□□□ 0.45
MALAT1-213ENST00000618227 CST5P28325 142 aaPredicted RBP17.84■□□□□ 0.45
MALAT1-213ENST00000618227 SFNP31947 248 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 PPP2R5CQ13362 524 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 NBR1Q14596 966 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 BRDTQ58F21 947 aaPredicted RBP17.84■□□□□ 0.45
MALAT1-213ENST00000618227 CLEC17AQ6ZS10 378 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 SMAP1Q8IYB5 467 aaPredicted RBP17.84■□□□□ 0.45
MALAT1-213ENST00000618227 LINC00301Q8NCQ3 95 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 RAB34Q9BZG1 259 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 SCAND2PQ9GZW5 306 aaPredicted RBP17.84■□□□□ 0.45
MALAT1-213ENST00000618227 UNC93B1Q9H1C4 597 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 SLC9A2Q9UBY0 812 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 CLIC4Q9Y696 253 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 STK24Q9Y6E0 443 aa17.84■□□□□ 0.45
MALAT1-213ENST00000618227 ADCY6O43306 1168 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 KPNA6O60684 536 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 PPP6R2O75170 966 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 PPFIA4O75335 1185 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 ATG7O95352 703 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 GJB1P08034 283 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 DNM1Q05193 864 aaKnown RBP17.83■□□□□ 0.44
MALAT1-213ENST00000618227 TMEM266Q2M3C6 531 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 DTHD1Q6ZMT9 781 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 CYFIP1Q7L576 1253 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 TLK2Q86UE8 772 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 ARRDC4Q8NCT1 418 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 KCNG4Q8TDN1 519 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 RNF208Q9H0X6 261 aa17.83■□□□□ 0.44
MALAT1-213ENST00000618227 TTC12Q9H892 705 aaPredicted RBP17.83■□□□□ 0.44
MALAT1-213ENST00000618227 TFIP11Q9UBB9 837 aaKnown RBP17.83■□□□□ 0.44
MALAT1-213ENST00000618227 DYNC1LI2O43237 492 aaPredicted RBP17.82■□□□□ 0.44
MALAT1-213ENST00000618227 CPT1AP50416 773 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 JAK3P52333 1124 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 SPIRE1Q08AE8 756 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 MTFR1Q15390 333 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 KLHDC9Q8NEP7 349 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 OR6J1Q8NGC5 347 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 SEPT1Q8WYJ6 367 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 AK8Q96MA6 479 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 SPATA33Q96N06 139 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 XPNPEP3Q9NQH7 507 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 VAV3Q9UKW4 847 aa17.82■□□□□ 0.44
MALAT1-213ENST00000618227 SRPRBQ9Y5M8 271 aaKnown RBP17.82■□□□□ 0.44
MALAT1-213ENST00000618227 ELP1O95163 1332 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 WDR64B1ANS9 1081 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 SPTLC2O15270 562 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 SLC26A4O43511 780 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 ZEB2O60315 1214 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 ADAMTS4O75173 837 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 TXKP42681 527 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 STK38Q15208 465 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 RNF180Q86T96 592 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 IGSF22Q8N9C0 903 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 COPS5Q92905 334 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 GPR20Q99678 358 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 TSEN34Q9BSV6 310 aaKnown RBP17.81■□□□□ 0.44
MALAT1-213ENST00000618227 CRISPLD2Q9H0B8 497 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 OGDHLQ9ULD0 1010 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 PCDHA10Q9Y5I2 948 aa17.81■□□□□ 0.44
MALAT1-213ENST00000618227 SYNRGQ9UMZ2 1314 aa17.8■□□□□ 0.44
MALAT1-213ENST00000618227 IGKV6D-21A0A0A0MT36 114 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms