RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 ZNF148Q9UQR1 794 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 PCDHB6Q9Y5E3 794 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 MT-ND3P03897 115 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 HSPA8P11142 646 aaKnown RBP11.11□□□□□ -0.63
CUL4A-212ENST00000617546 KRT3P12035 628 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 CUL3Q13618 768 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 PCGF5Q86SE9 256 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 LRRC37BQ96QE4 947 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 OSBPL1AQ9BXW6 950 aa11.11□□□□□ -0.63
CUL4A-212ENST00000617546 TLR7Q9NYK1 1049 aaKnown RBP11.11□□□□□ -0.63
CUL4A-212ENST00000617546 A2ML1A8K2U0 1454 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 EXOC1LA0A1B0GW35 172 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 GIPC1O14908 333 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 GYG2O15488 501 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 MGEA5O60502 916 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 GSTA1P08263 222 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 PLS1Q14651 629 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 SYDE1Q6ZW31 735 aaPredicted RBP11.1□□□□□ -0.63
CUL4A-212ENST00000617546 SMYD4Q8IYR2 804 aaPredicted RBP11.1□□□□□ -0.63
CUL4A-212ENST00000617546 GFPT2O94808 682 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 P4HA1P13674 534 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 RFX1P22670 979 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 NSFP46459 744 aaKnown RBP11.1□□□□□ -0.63
CUL4A-212ENST00000617546 ALKBH5Q6P6C2 394 aaKnown RBP11.1□□□□□ -0.63
CUL4A-212ENST00000617546 ARHGAP27Q6ZUM4 889 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 ZC3H18Q86VM9 953 aaKnown RBP11.1□□□□□ -0.63
CUL4A-212ENST00000617546 GRAMD1CQ8IYS0 662 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 SGSM3Q96HU1 749 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 A0A087WWV3 80 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 SASH1O94885 1247 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 LSP1P33241 339 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 HSPA9P38646 679 aaKnown RBP11.1□□□□□ -0.63
CUL4A-212ENST00000617546 TEDDM1Q5T9Z0 273 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 TBC1D22AQ8WUA7 517 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 SDCCAG3Q96C92 435 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 ZFP69BQ9UJL9 534 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 A0A1W2PQJ5 194 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 SSU72P8A0A1W2PR75 194 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 PRDM1O75626 825 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 CYP27A1Q02318 531 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 LRRC31Q6UY01 552 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 ARHGEF10LQ9HCE6 1279 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 HAUS2Q9NVX0 235 aa11.1□□□□□ -0.63
CUL4A-212ENST00000617546 PFASO15067 1338 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.09□□□□□ -0.63
CUL4A-212ENST00000617546 POC1B-GALNT4F8VUJ3 575 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 ACTN1P12814 892 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 KLC1Q07866 573 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 PICALMQ13492 652 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 RINT1Q6NUQ1 792 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 ZNF449Q6P9G9 518 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 FAM133AQ8N9E0 248 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 BIN2Q9UBW5 565 aaPredicted RBP11.09□□□□□ -0.63
CUL4A-212ENST00000617546 TRPC6Q9Y210 931 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 ATP1A1P05023 1023 aaKnown RBP11.09□□□□□ -0.63
CUL4A-212ENST00000617546 PTK2Q05397 1052 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 ALX1Q15699 326 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 USPL1Q5W0Q7 1092 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 ANKRD65E5RJM6 399 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 STAM2O75886 525 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 PRLRP16471 622 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 ITIH4Q14624 930 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 MESDQ14696 234 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 ASPRV1Q53RT3 343 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 FBXW10Q5XX13 1052 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 KRT26Q7Z3Y9 468 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 TC2NQ8N9U0 490 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 UHMK1Q8TAS1 419 aaKnown RBP11.09□□□□□ -0.63
CUL4A-212ENST00000617546 ZNF496Q96IT1 587 aaPredicted RBP11.09□□□□□ -0.63
CUL4A-212ENST00000617546 EYA3Q99504 573 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 SLC40A1Q9NP59 571 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 SLC26A4O43511 780 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 MDM2Q00987 491 aaPredicted RBP11.09□□□□□ -0.63
CUL4A-212ENST00000617546 SF3A3Q12874 501 aaKnown RBP eCLIP11.09□□□□□ -0.632e-8■■□□□ 13.6
CUL4A-212ENST00000617546 PTGISQ16647 500 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 OTUD6AQ7L8S5 288 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 REXO1L1PQ8IX06 675 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 FAM178BQ8IXR5 827 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 SRRM1Q8IYB3 904 aaKnown RBP11.09□□□□□ -0.63
CUL4A-212ENST00000617546 PALLDQ8WX93 1383 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 NEO1Q92859 1461 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 KLRF2D3W0D1 207 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 HAUS5O94927 633 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 MAPK4P31152 587 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 PHEXP78562 749 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 CDR2Q01850 454 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 TMED1Q13445 227 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 PDZD4Q76G19 769 aaPredicted RBP11.09□□□□□ -0.63
CUL4A-212ENST00000617546 MAP7D3Q8IWC1 876 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 FAM186BQ8IYM0 893 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 CDCA7Q9BWT1 371 aaPredicted RBP11.09□□□□□ -0.63
CUL4A-212ENST00000617546 TMEM206Q9H813 350 aa11.09□□□□□ -0.63
CUL4A-212ENST00000617546 MAP3K15Q6ZN16 1313 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 SRGAP2O75044 1071 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 PDE8BO95263 885 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 RAD23BP54727 409 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 KLHL38Q2WGJ6 581 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 MCF2L2Q86YR7 1114 aa11.08□□□□□ -0.64
CUL4A-212ENST00000617546 MB21D2Q8IYB1 491 aaPredicted RBP11.08□□□□□ -0.64
CUL4A-212ENST00000617546 SEC16BQ96JE7 1060 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms