RNA–Protein interactions for RNA: ENST00000616449.1

ACSS3-208, Transcript of acyl-CoA synthetase short chain family member 3, human

Gene ACSS3, Length 3,833 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS3-208	ENST00000616449	SBK1	Q52WX2	424 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	NAALADL2	Q58DX5	795 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	NT5DC1	Q5TFE4	455 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	KCNK18	Q7Z418	384 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	SEMA6B	Q9H3T3	888 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	SH3GLB2	Q9NR46	395 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	RCCD1	A6NED2	376 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	PPIP5K2	O43314	1243 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	GPATCH11	Q8N954	259 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	HDAC7	Q8WUI4	952 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	OSBPL9	Q96SU4	736 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	PAIP2	Q9BPZ3	127 aa	Known RBP	14	□□□□□ -0.17
ACSS3-208	ENST00000616449	POLL	Q9UGP5	575 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	EPHB6	O15197	1021 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	TUBB	P07437	444 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	MMP10	P09238	476 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	KRT5	P13647	590 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	KCNH2	Q12809	1159 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	ODR4	Q5SWX8	454 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	FAM178B	Q8IXR5	827 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	OTUD6B	Q8N6M0	293 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	CUEDC2	Q9H467	287 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	DMGDH	Q9UI17	866 aa	Known RBP	14	□□□□□ -0.17
ACSS3-208	ENST00000616449	RABGAP1	Q9Y3P9	1069 aa		14	□□□□□ -0.17
ACSS3-208	ENST00000616449	BUB1B	O60566	1050 aa	Predicted RBP	13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	KRT71	Q3SY84	523 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	BEND6	Q5SZJ8	279 aa	Predicted RBP	13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	GJB7	Q6PEY0	223 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	GCNT4	Q9P109	453 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	STK17A	Q9UEE5	414 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	PCDHAC2	Q9Y5I4	1007 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	C5	P01031	1676 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	MRC1	P22897	1456 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	LMO7	Q8WWI1	1683 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449		E7EVH7	732 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	ADCY1	Q08828	1119 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	GRB10	Q13322	594 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	IFI16	Q16666	785 aa	Known RBP	13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	CCDC170	Q8IYT3	715 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	KIAA0895	Q8NCT3	520 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	AMN	Q9BXJ7	453 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	MARF1	Q9Y4F3	1742 aa	Known RBP	13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	GOLGA8IP	A6NC78	632 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	GOLGA8J	A6NMD2	632 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	SPOP	O43791	374 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	CALU	O43852	315 aa	Predicted RBP	13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	FLOT1	O75955	427 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	TRIM49	P0CI25	452 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	TRIM49C	P0CI26	452 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	NEFH	P12036	1026 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	ALAS1	P13196	640 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	SLC9A1	P19634	815 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	PAK2	Q13177	524 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	SH3RF1	Q7Z6J0	888 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	CERS3	Q8IU89	383 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	SPATA4	Q8NEY3	305 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	DUSP9	Q99956	384 aa	Known RBP	13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	CAPS2	Q9BXY5	557 aa		13.99	□□□□□ -0.17
ACSS3-208	ENST00000616449	PALM3	A6NDB9	673 aa	Predicted RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	ZBTB5	O15062	677 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	RDX	P35241	583 aa	Known RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	STAT1	P42224	750 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	ZNF211	Q13398	564 aa	Predicted RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	LRCH2	Q5VUJ6	765 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	RSRC2	Q7L4I2	434 aa	Known RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	GOLGA5	Q8TBA6	731 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	EXOC4	Q96A65	974 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	ZMYND12	Q9H0C1	365 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	DDX47	Q9H0S4	455 aa	Known RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	KCNQ5	Q9NR82	932 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	FAM237A	A0A1B0GTK4	181 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	BBOX1	O75936	387 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	TUBB4B	P68371	445 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	TTC31	Q49AM3	519 aa	Predicted RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	FOXR1	Q6PIV2	292 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	MGARP	Q8TDB4	240 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	JMJD4	Q9H9V9	463 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	DNAJC17	Q9NVM6	304 aa	Known RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	H2AFZ	P0C0S5	128 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	CTNNA1	P35221	906 aa	Known RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	ARHGAP4	P98171	946 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	KCNB1	Q14721	858 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	GPATCH4	Q5T3I0	446 aa	Known RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	H2AFV	Q71UI9	128 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	DPH6	Q7L8W6	267 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	CCDC50	Q8IVM0	306 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	TAB3	Q8N5C8	712 aa	Predicted RBP	13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	RETREG2	Q8NC44	543 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	PACSIN1	Q9BY11	444 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	PTPN22	Q9Y2R2	807 aa		13.98	□□□□□ -0.17
ACSS3-208	ENST00000616449	RSPH10B2	B2RC85	870 aa		13.97	□□□□□ -0.17
ACSS3-208	ENST00000616449	MYO1C	O00159	1063 aa		13.97	□□□□□ -0.17
ACSS3-208	ENST00000616449	RSPH10B	P0C881	870 aa		13.97	□□□□□ -0.17
ACSS3-208	ENST00000616449	ARHGAP25	P42331	645 aa		13.97	□□□□□ -0.17
ACSS3-208	ENST00000616449	ALKBH5	Q6P6C2	394 aa	Known RBP	13.97	□□□□□ -0.17
ACSS3-208	ENST00000616449	GBP6	Q6ZN66	633 aa		13.97	□□□□□ -0.17
ACSS3-208	ENST00000616449	CPLX4	Q7Z7G2	160 aa		13.97	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms