RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 APTXQ7Z2E3 356 aaKnown RBP11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 GPBP1Q86WP2 473 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 DNAJC5GQ8N7S2 189 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 ZC3H15Q8WU90 426 aaKnown RBP11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 DNAJC19Q96DA6 116 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 DHTKD1Q96HY7 919 aaPredicted RBP11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 TRIM47Q96LD4 638 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 TAAR1Q96RJ0 339 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 EIF2AK1Q9BQI3 630 aaKnown RBP11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 POLR3CQ9BUI4 534 aaPredicted RBP11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 ELP3Q9H9T3 547 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 SLC39A2Q9NP94 309 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 ZNF214Q9UL59 606 aaPredicted RBP11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 A0A0G2JMZ2 1700 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 MYPNQ86TC9 1320 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 GLTPD2A6NH11 291 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 NF2P35240 595 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 PPP1R2P41236 205 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 SLC12A3P55017 1021 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 EHHADHQ08426 723 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 COASYQ13057 564 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 COBLL1Q53SF7 1204 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 EAPPQ56P03 285 aaPredicted RBP11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 TREML2Q5T2D2 321 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 PCNX4Q63HM2 1172 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 MOB2Q70IA6 237 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 CCDC150Q8NCX0 1101 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 KIAA1524Q8TCG1 905 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 P2RX5Q93086 422 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 CLMNQ96JQ2 1002 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 DNM3Q9UQ16 869 aa11.17□□□□□ -0.62
AL353770.3-201ENST00000616253 NPHP3-ACAD11A0A0J9YXS1 232 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 BICDL2A1A5D9 508 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 KCNJ18B7U540 433 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 IPO5O00410 1097 aaKnown RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 BCRP11274 1271 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 CYP11B2P19099 503 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 CCNE1P24864 410 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 PSMC6P62333 389 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 MRPS9P82933 396 aaKnown RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 SPAG1Q07617 926 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 FSTL1Q12841 308 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 PABPC4Q13310 644 aaKnown RBP eCLIP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 TTLL12Q14166 644 aaPredicted RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 KCNJ12Q14500 433 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 PGM5Q15124 567 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 KRT31Q15323 416 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 TKFCQ3LXA3 575 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 TTI2Q6NXR4 508 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 ARMCX5Q6P1M9 558 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 NIPA1Q7RTP0 329 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 PURBQ96QR8 312 aaKnown RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 CTAGE1Q96RT6 745 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 RMDN3Q96TC7 470 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 TEKT3Q9BXF9 490 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 TEX13BQ9BXU2 312 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 WDR11Q9BZH6 1224 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 UNC45AQ9H3U1 944 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 PXMP2Q9NR77 195 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 BMP2KQ9NSY1 1161 aaPredicted RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 PANK4Q9NVE7 773 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 HOXC10Q9NYD6 342 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 RGL1Q9NZL6 768 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 PKD2L1Q9P0L9 805 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 UBIAD1Q9Y5Z9 338 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 LCTP09848 1927 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 LOXHD1Q8IVV2 1947 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 ATP2A1O14983 1001 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 KRT18P05783 430 aaKnown RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 SFPQP23246 707 aaKnown RBP eCLIP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 CCZ1BP86790 482 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 CCZ1P86791 482 aaPredicted RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 CACNB1Q02641 598 aaPredicted RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 BAATQ14032 418 aaPredicted RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 CTTNQ14247 550 aaKnown RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 PLS1Q14651 629 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 NR1I3Q14994 352 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 TCP11X2Q5H9J9 407 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 DYDC2Q96IM9 177 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 RIT2Q99578 217 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 PDCD2LQ9BRP1 358 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 TAF1DQ9H5J8 278 aaPredicted RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 THAP9Q9H5L6 903 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 TUFT1Q9NNX1 390 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 KCNH7Q9NS40 1196 aa11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 ADD3Q9UEY8 706 aaKnown RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 LIMA1Q9UHB6 759 aaKnown RBP11.16□□□□□ -0.62
AL353770.3-201ENST00000616253 DDX39AO00148 427 aaKnown RBP11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 IRF6O14896 467 aa11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 TEX33O43247 280 aa11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 MYCLP12524 364 aaPredicted RBP11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 PPATQ06203 517 aa11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 RAD51AP2Q09MP3 1159 aa11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 PSMD2Q13200 908 aa11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 NOLC1Q14978 699 aaKnown RBP eCLIP11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 FILIP1LQ4L180 1135 aa11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 ARSHQ5FYA8 562 aa11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 FAM26FQ5R3K3 315 aa11.15□□□□□ -0.62
AL353770.3-201ENST00000616253 ARHGEF16Q5VV41 709 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms