RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 WLSQ5T9L3 541 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 ARL6IP4Q66PJ3 421 aaKnown RBP9.75□□□□□ -0.85
VPS11-206ENST00000614944 SDCCAG8Q86SQ7 713 aaPredicted RBP9.75□□□□□ -0.85
VPS11-206ENST00000614944 TTC30AQ86WT1 665 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 TBC1D7Q9P0N9 293 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 VPS54Q9P1Q0 977 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 BTBD18B2RXH4 712 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 USP17L10C9JJH3 530 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 ATP6V1G1O75348 118 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 E2F6O75461 281 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 TOB1P50616 345 aaPredicted RBP9.75□□□□□ -0.85
VPS11-206ENST00000614944 BACE1P56817 501 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 TMED1Q13445 227 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 CCDC80Q76M96 950 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 ZNF280CQ8ND82 737 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 PIGSQ96S52 555 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 TRIM4Q9C037 500 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 PCDHA6Q9UN73 950 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 ITM2BQ9Y287 266 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 AFG3L2Q9Y4W6 797 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 PCDHA8Q9Y5H6 950 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 ABCB11O95342 1321 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 CUTAO60888 179 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 CA8P35219 290 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 IREB2P48200 963 aaKnown RBP9.75□□□□□ -0.85
VPS11-206ENST00000614944 SLC8A3P57103 927 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 LBX2Q6XYB7 198 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 RBM43Q6ZSC3 357 aaKnown RBP9.75□□□□□ -0.85
VPS11-206ENST00000614944 PARP9Q8IXQ6 854 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 EPAS1Q99814 870 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 AMNQ9BXJ7 453 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 IRF2BPLQ9H1B7 796 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 ACBD3Q9H3P7 528 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 CTDP1Q9Y5B0 961 aaPredicted RBP9.75□□□□□ -0.85
VPS11-206ENST00000614944 KRT38O76015 456 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 PTGS1P23219 599 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 PPATQ06203 517 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 KCNB1Q14721 858 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 ZNF394Q53GI3 561 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 ARHGAP22Q7Z5H3 698 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 FERMT3Q86UX7 667 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 CMTR1Q8N1G2 835 aaKnown RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 NEK9Q8TD19 979 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 FERMT2Q96AC1 680 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 PUF60Q9UHX1 559 aaKnown RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 KCNH4Q9UQ05 1017 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 CXCL11O14625 94 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 PPP1R12BO60237 982 aaPredicted RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 OPA1O60313 960 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 ZNF189O75820 626 aaPredicted RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 FOSP01100 380 aaPredicted RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 ADCY7P51828 1080 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 PTPN14Q15678 1187 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 LRRC23Q53EV4 343 aaPredicted RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 LDLRAD1Q5T700 205 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 OTUD7BQ6GQQ9 843 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 KLHL10Q6JEL2 608 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 TYW1BQ6NUM6 668 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 ACER1Q8TDN7 264 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 MBOAT7Q96N66 472 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 CD248Q9HCU0 757 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 DDX19AQ9NUU7 478 aaKnown RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 PRR12Q9ULL5 1215 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 KCNJ14Q9UNX9 436 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 RABGAP1Q9Y3P9 1069 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 SNCAIPQ9Y6H5 919 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 FRMPD2Q68DX3 1309 aaPredicted RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 UBE2Q2LH0YL09 131 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 SPTLC2O15270 562 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 PPP1R11O60927 126 aaPredicted RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 GOLGA8HP0CJ92 632 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 CMA1P23946 247 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 ATP2C1P98194 919 aaPredicted RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 GNL2Q13823 731 aaKnown RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 SHROOM1Q2M3G4 852 aaPredicted RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 TKFCQ3LXA3 575 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 MIGA2Q7L4E1 593 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 CLEC10AQ8IUN9 316 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 MFN1Q8IWA4 741 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 TRIML1Q8N9V2 468 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 CUL5Q93034 780 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 TRIM11Q96F44 468 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 CDCA5Q96FF9 252 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 SCLT1Q96NL6 688 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 PYM1Q9BRP8 204 aaKnown RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 SLC45A1Q9Y2W3 748 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.74□□□□□ -0.85
VPS11-206ENST00000614944 SRPRBQ9Y5M8 271 aaKnown RBP9.74□□□□□ -0.85
VPS11-206ENST00000614944 FRMPD4Q14CM0 1322 aa9.74□□□□□ -0.85
VPS11-206ENST00000614944 PTPREP23469 700 aa9.73□□□□□ -0.85
VPS11-206ENST00000614944 NAPAP54920 295 aa9.73□□□□□ -0.85
VPS11-206ENST00000614944 GUCY1B3Q02153 619 aa9.73□□□□□ -0.85
VPS11-206ENST00000614944 DHX8Q14562 1220 aaKnown RBP9.73□□□□□ -0.85
VPS11-206ENST00000614944 QRICH1Q2TAL8 776 aa9.73□□□□□ -0.85
VPS11-206ENST00000614944 THEMIS2Q5TEJ8 643 aa9.73□□□□□ -0.85
VPS11-206ENST00000614944 PPP4R3AQ6IN85 833 aa9.73□□□□□ -0.85
VPS11-206ENST00000614944 LDHDQ86WU2 507 aa9.73□□□□□ -0.85
VPS11-206ENST00000614944 ANKRD13AQ8IZ07 590 aa9.73□□□□□ -0.85
VPS11-206ENST00000614944 WRNIP1Q96S55 665 aa9.73□□□□□ -0.85
VPS11-206ENST00000614944 RETREG1Q9H6L5 497 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms