RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TAF1DQ9H5J8 278 aaPredicted RBP12.88□□□□□ -0.35
CDH5-208ENST00000614547 PGRMC1O00264 195 aaKnown RBP12.88□□□□□ -0.35
CDH5-208ENST00000614547 GNPATO15228 680 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 CLIC2O15247 247 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 HSD17B3P37058 310 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 LRRC47Q8N1G4 583 aaKnown RBP12.88□□□□□ -0.35
CDH5-208ENST00000614547 SPATA20Q8TB22 786 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 DDX12PQ92771 950 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 TRIM6Q9C030 488 aaPredicted RBP12.88□□□□□ -0.35
CDH5-208ENST00000614547 YIPF3Q9GZM5 350 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 TBK1Q9UHD2 729 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 L3MBTL1Q9Y468 752 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 A0A1W2PRG0 241 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 ANKRD62A6NC57 917 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 MEIS1O00470 390 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 FAM107AO95990 144 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 DIXDC1Q155Q3 683 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 GLIS3Q8NEA6 775 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 SPDL1Q96EA4 605 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 PIGSQ96S52 555 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 SWAP70Q9UH65 585 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 SALL4Q9UJQ4 1053 aa12.88□□□□□ -0.35
CDH5-208ENST00000614547 MEGF6O75095 1541 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 A0A087X0T9 212 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 TCRBV5S4A2TA0A5A2 114 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 LRRC10BA6NIK2 292 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 GFPT2O94808 682 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 H2AFZP0C0S5 128 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 FAM228BP0C875 321 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 SEPT7Q16181 437 aaKnown RBP12.87□□□□□ -0.35
CDH5-208ENST00000614547 ARL6IP4Q66PJ3 421 aaKnown RBP12.87□□□□□ -0.35
CDH5-208ENST00000614547 ALKBH5Q6P6C2 394 aaKnown RBP12.87□□□□□ -0.35
CDH5-208ENST00000614547 H2AFVQ71UI9 128 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 LRP10Q7Z4F1 713 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 GPBP1Q86WP2 473 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 ELOA2Q8IYF1 753 aaPredicted RBP12.87□□□□□ -0.35
CDH5-208ENST00000614547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.87□□□□□ -0.35
CDH5-208ENST00000614547 SRP68Q9UHB9 627 aaKnown RBP12.87□□□□□ -0.35
CDH5-208ENST00000614547 KIAA1024Q9UPX6 916 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 CYP4A11Q02928 519 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 UBE2SQ16763 222 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 GRIPAP1Q4V328 841 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 NAIF1Q69YI7 327 aaPredicted RBP12.87□□□□□ -0.35
CDH5-208ENST00000614547 KRT25Q7Z3Z0 450 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 CCDC65Q8IXS2 484 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 RPGRQ92834 1020 aaKnown RBP12.87□□□□□ -0.35
CDH5-208ENST00000614547 KLHL29Q96CT2 875 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 CHORDC1Q9UHD1 332 aaPredicted RBP12.87□□□□□ -0.35
CDH5-208ENST00000614547 PLAGL2Q9UPG8 496 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 CNTNAP5Q8WYK1 1306 aa12.87□□□□□ -0.35
CDH5-208ENST00000614547 NPHP3-ACAD11A0A0J9YXS1 232 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 KLHDC7AQ5VTJ3 777 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 PDXDC1Q6P996 788 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 CCDC105Q8IYK2 499 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 PRPF38AQ8NAV1 312 aaKnown RBP12.86□□□□□ -0.35
CDH5-208ENST00000614547 LMBR1Q8WVP7 490 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 CTTNBP2NLQ9P2B4 639 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 AMFRQ9UKV5 643 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 COL4A3BPQ9Y5P4 624 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 SLIT1O75093 1534 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 LRRN2O75325 713 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 RHOBTB3O94955 611 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 SERPING1P05155 500 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 CSF1RP07333 972 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 NR2F2P24468 414 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 SLC8A1P32418 973 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 LACTBP83111 547 aaPredicted RBP12.86□□□□□ -0.35
CDH5-208ENST00000614547 FKBP3Q00688 224 aaKnown RBP12.86□□□□□ -0.35
CDH5-208ENST00000614547 TBC1D10BQ4KMP7 808 aaPredicted RBP12.86□□□□□ -0.35
CDH5-208ENST00000614547 HOOK3Q86VS8 718 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 VSIG1Q86XK7 387 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 CCDC50Q8IVM0 306 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 RAPGEF5Q92565 580 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 FMO2Q99518 471 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 SEMA6BQ9H3T3 888 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 AZI2Q9H6S1 392 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 DDX20Q9UHI6 824 aaKnown RBP12.86□□□□□ -0.35
CDH5-208ENST00000614547 MST1RQ04912 1400 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 MYMKA6NI61 221 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 H0Y3Z8 333 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 FLOT1O75955 427 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 TDP2O95551 362 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 ITGA4P13612 1032 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 MTMR3Q13615 1198 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 CCDC6Q16204 474 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 KDM7AQ6ZMT4 941 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 FMNL3Q8IVF7 1028 aa12.86□□□□□ -0.35
CDH5-208ENST00000614547 ACTR5Q9H9F9 607 aaPredicted RBP12.86□□□□□ -0.35
CDH5-208ENST00000614547 TPX2Q9ULW0 747 aaKnown RBP12.86□□□□□ -0.35
CDH5-208ENST00000614547 CHMP2AO43633 222 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 HIBADHP31937 336 aaKnown RBP12.85□□□□□ -0.35
CDH5-208ENST00000614547 SEC23AQ15436 765 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 TRIP13Q15645 432 aaPredicted RBP12.85□□□□□ -0.35
CDH5-208ENST00000614547 QPCTQ16769 361 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 ZSCAN29Q8IWY8 852 aaPredicted RBP12.85□□□□□ -0.35
CDH5-208ENST00000614547 CNPY4Q8N129 248 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 ADAM33Q9BZ11 813 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 VCPKMTQ9H867 229 aa12.85□□□□□ -0.35
CDH5-208ENST00000614547 NOC2LQ9Y3T9 749 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms