RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	UTP14C	Q5TAP6	766 aa	Known RBP	12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	PHOSPHO2	Q8TCD6	241 aa		12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	TNPO1	Q92973	898 aa	Known RBP	12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	ATP6V0A1	Q93050	837 aa		12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	SLC9A7	Q96T83	725 aa		12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	CXXC1	Q9P0U4	656 aa	Predicted RBP	12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	PCDHA6	Q9UN73	950 aa		12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	PCDHA8	Q9Y5H6	950 aa		12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	PCDHA11	Q9Y5I1	949 aa		12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197		V9GY48	417 aa	Predicted RBP	12.56	□□□□□ -0.4
NPIPB4-222	ENST00000614197	HAS3	O00219	553 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	LGALS2	P05162	132 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	ZNF76	P36508	570 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	PBX2	P40425	430 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	SP2	Q02086	613 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	MTMR1	Q13613	665 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	UBE2S	Q16763	222 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	ADCK5	Q3MIX3	580 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	PPP2R2D	Q66LE6	453 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	MCTP2	Q6DN12	878 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	RASEF	Q8IZ41	740 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	ZBED2	Q9BTP6	218 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	NKX2-4	Q9H2Z4	354 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	EMSY	Q7Z589	1322 aa		12.55	□□□□□ -0.4
NPIPB4-222	ENST00000614197	MYH6	P13533	1939 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	SMIM10L2A	P0DMW4	78 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	SMIM10L2B	P0DMW5	78 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	CKB	P12277	381 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	IGFBP4	P22692	258 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	HSPA4	P34932	840 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	THPO	P40225	353 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	AP3B2	Q13367	1082 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	GRIN2C	Q14957	1233 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	WWC2	Q6AWC2	1192 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	CNKSR3	Q6P9H4	555 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197		Q6ZUG5	572 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	GLG1	Q92896	1179 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	BRF1	Q92994	677 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	GPR20	Q99678	358 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	SDF4	Q9BRK5	362 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	RIC8A	Q9NPQ8	531 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	TCEAL9	Q9UHQ7	104 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	BRPF3	Q9ULD4	1205 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	CNTNAP5	Q8WYK1	1306 aa		12.54	□□□□□ -0.4
NPIPB4-222	ENST00000614197	ABHD14A-ACY1	A0A1B0GW23	586 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	SMCO2	A6NFE2	343 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	DLL1	O00548	723 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	EPB41L2	O43491	1005 aa	Known RBP	12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	EIF5B	O60841	1220 aa	Known RBP	12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	CAND2	O75155	1236 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	RABGGTB	P53611	331 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	RBL2	Q08999	1139 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	APOBR	Q0VD83	1088 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	IKBKE	Q14164	716 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	RSPH3	Q86UC2	560 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	SEPT1	Q8WYJ6	367 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	C16orf70	Q9BSU1	422 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	PRDM12	Q9H4Q4	367 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	AZI2	Q9H6S1	392 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	C6orf50	Q9HD87	102 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	JADE2	Q9NQC1	790 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	BARHL2	Q9NY43	387 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	PKD2L1	Q9P0L9	805 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	SNX14	Q9Y5W7	946 aa		12.53	□□□□□ -0.4
NPIPB4-222	ENST00000614197	RSPH10B2	B2RC85	870 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	GTPBP6	O43824	516 aa	Predicted RBP	12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TLL1	O43897	1013 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	RSPH10B	P0C881	870 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	RPS6KB1	P23443	525 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	GNA11	P29992	359 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TCF7	P36402	384 aa	Predicted RBP	12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ARHGAP4	P98171	946 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ZNF618	Q5T7W0	954 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CPLX2	Q6PUV4	134 aa	Known RBP	12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SERINC5	Q86VE9	423 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	BICD2	Q8TD16	824 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TSPYL2	Q9H2G4	693 aa	Predicted RBP	12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SMARCAD1	Q9H4L7	1026 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ERAP1	Q9NZ08	941 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	UBIAD1	Q9Y5Z9	338 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CYP46A1	Q9Y6A2	500 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SCN10A	Q9Y5Y9	1956 aa		12.52	□□□□□ -0.41
NPIPB4-222	ENST00000614197	STXBP3	O00186	592 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	LGR5	O75473	907 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	RPLP2	P05387	115 aa	Known RBP	12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SCG2	P13521	617 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CPA1	P15085	419 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ITGB5	P18084	799 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ZNF200	P98182	395 aa	Predicted RBP	12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SEMA3F	Q13275	785 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	COL9A3	Q14050	684 aa	Predicted RBP	12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	PFKFB3	Q16875	520 aa	Predicted RBP	12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	ERICH6B	Q5W0A0	696 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	HERC6	Q8IVU3	1022 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	TRIM22	Q8IYM9	498 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	CCDC148	Q8NFR7	591 aa		12.51	□□□□□ -0.41
NPIPB4-222	ENST00000614197	SEPT8	Q92599	483 aa		12.51	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms