RNA–Protein interactions for RNA: ENST00000613575.4

CDKAL1-204, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKAL1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-204ENST00000613575 LRMPQ12912 555 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 SAFBQ15424 915 aaKnown RBP eCLIP7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 DPCR1Q3MIW9 517 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 CCDC38Q502W7 563 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 CAVIN4Q5BKX8 364 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 ADGRA1Q86SQ6 560 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 MICU3Q86XE3 530 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 RAB11FIP4Q86YS3 637 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 APLFQ8IW19 511 aaPredicted RBP7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 DRC7Q8IY82 874 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 DEPDC4Q8N2C3 294 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 ZNF784Q8NCA9 323 aaPredicted RBP7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 MAGEC3Q8TD91 643 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 ESR2Q92731 530 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 KAT2BQ92831 832 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 ITPKCQ96DU7 683 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 SPDL1Q96EA4 605 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 SLC26A6Q9BXS9 759 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 MAK16Q9BXY0 300 aaKnown RBP7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 HSD3B7Q9H2F3 369 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 TBC1D7Q9P0N9 293 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 ANKIB1Q9P2G1 1089 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 RABL2AQ9UBK7 228 aaPredicted RBP7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 NARFQ9UHQ1 456 aa7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 SRPRBQ9Y5M8 271 aaKnown RBP7.41□□□□□ -1.22
CDKAL1-204ENST00000613575 USP17L5A8MUK1 530 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 ORC4O43929 436 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 ATP6V1G1O75348 118 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 MYCP01106 439 aaPredicted RBP7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 FERP16591 822 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 ZFXP17010 805 aaPredicted RBP7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 RXRAP19793 462 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 RFX1P22670 979 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 LMOD1P29536 600 aaPredicted RBP7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 MARCKSP29966 332 aaPredicted RBP7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 TM4SF1P30408 202 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 INPP5BP32019 993 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 GUCY1A2P33402 732 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 TROAPQ12815 778 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 SLMAPQ14BN4 828 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 PTPN14Q15678 1187 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 VPS72Q15906 364 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 Q4G0T1 1027 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 SBK1Q52WX2 424 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 ISM2Q6H9L7 571 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 ZNF654Q8IZM8 581 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 STK11IPQ8N1F8 1099 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 TRIML1Q8N9V2 468 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 LINC00116Q8NCU8 138 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 SPATA20Q8TB22 786 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 NEK9Q8TD19 979 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 ZNF384Q8TF68 577 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 ZFAND2BQ8WV99 257 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 RSPH1Q8WYR4 309 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 TAF4BQ92750 862 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 PHACTR1Q9C0D0 580 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 NYXQ9GZU5 481 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 ANKRD2Q9GZV1 360 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 ZFAND3Q9H8U3 227 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 LUC7LQ9NQ29 371 aaKnown RBP7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 KCNH3Q9ULD8 1083 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 ANKRD36CQ5JPF3 1778 aa7.4□□□□□ -1.23
CDKAL1-204ENST00000613575 DDX60Q8IY21 1712 aaKnown RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 UNCXA6NJT0 531 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 SPDYE3A6NKU9 549 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 CAPN5O15484 640 aaPredicted RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 PEX14O75381 377 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 MMEP08473 750 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 VIL1P09327 827 aaKnown RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 CALM1P0DP23 149 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 CALM2P0DP24 149 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 CALM3P0DP25 149 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 TIMP2P16035 220 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 DESP17661 470 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 TRIM21P19474 475 aaKnown RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 HOXA10P31260 410 aaPredicted RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 GBP2P32456 591 aaPredicted RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 GYG1P46976 350 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 CCZ1BP86790 482 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 CCZ1P86791 482 aaPredicted RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 USP4Q13107 963 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 EML3Q32P44 896 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 SPATS2Q86XZ4 545 aaKnown RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 DZIP1Q86YF9 867 aaKnown RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 DIS3L2Q8IYB7 885 aaKnown RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 AOPEPQ8N6M6 819 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 ANKS1AQ92625 1134 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 NSUN4Q96CB9 384 aaKnown RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 NLRP3Q96P20 1036 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 ZSCAN10Q96SZ4 725 aaPredicted RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 MYL10Q9BUA6 226 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 ATP8A2Q9NTI2 1148 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 DNAAF2Q9NVR5 837 aaKnown RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 TUBA8Q9NY65 449 aaPredicted RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 FBXO2Q9UK22 296 aaPredicted RBP7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 IRS2Q9Y4H2 1338 aa7.39□□□□□ -1.23
CDKAL1-204ENST00000613575 UBE2Q2LH0YL09 131 aa7.38□□□□□ -1.23
CDKAL1-204ENST00000613575 LIN7AO14910 233 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms