RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, humanhuman

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-222ENST00000613508 SEMA3FQ13275 785 aa12.85□□□□□ -0.35
CBWD1-222ENST00000613508 TCTN1Q2MV58 587 aa12.85□□□□□ -0.35
CBWD1-222ENST00000613508 PCNX4Q63HM2 1172 aa12.85□□□□□ -0.35
CBWD1-222ENST00000613508 CTCFLQ8NI51 663 aaPredicted RBP12.85□□□□□ -0.35
CBWD1-222ENST00000613508 ARNTL2Q8WYA1 636 aa12.85□□□□□ -0.35
CBWD1-222ENST00000613508 RRP36Q96EU6 259 aaKnown RBP12.85□□□□□ -0.35
CBWD1-222ENST00000613508 TMEM87BQ96K49 555 aa12.85□□□□□ -0.35
CBWD1-222ENST00000613508 LMCD1Q9NZU5 365 aa12.85□□□□□ -0.35
CBWD1-222ENST00000613508 BAZ2BQ9UIF8 2168 aaKnown RBP12.85□□□□□ -0.35
CBWD1-222ENST00000613508 MYH7BA7E2Y1 1941 aa12.85□□□□□ -0.35
CBWD1-222ENST00000613508 C17orf102A2RUQ5 167 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 LCHNA4D1U4 455 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 RSPH10B2B2RC85 870 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 NOP56O00567 594 aaKnown RBP12.84□□□□□ -0.35
CBWD1-222ENST00000613508 MEIS2O14770 477 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 PRC1O43663 620 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 RSPH10BP0C881 870 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 SMIM10L2AP0DMW4 78 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 SMIM10L2BP0DMW5 78 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 MCM5P33992 734 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 LIFRP42702 1097 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 ERVK-21P61565 698 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 GRB10Q13322 594 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 PLEKHG4Q58EX7 1191 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 GIMAP8Q8ND71 665 aaPredicted RBP12.84□□□□□ -0.35
CBWD1-222ENST00000613508 UHRF1Q96T88 793 aaPredicted RBP12.84□□□□□ -0.35
CBWD1-222ENST00000613508 GPR20Q99678 358 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 ZBED2Q9BTP6 218 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 LSG1Q9H089 658 aaKnown RBP12.84□□□□□ -0.35
CBWD1-222ENST00000613508 BCAS3Q9H6U6 928 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 CERS4Q9HA82 394 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 COG5Q9UP83 839 aa12.84□□□□□ -0.35
CBWD1-222ENST00000613508 SH2B2O14492 632 aaPredicted RBP12.83□□□□□ -0.36
CBWD1-222ENST00000613508 CALM1P0DP23 149 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 CALM2P0DP24 149 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 CALM3P0DP25 149 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 GNAT1P11488 350 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 THPOP40225 353 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 ADAM17P78536 824 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 USP17L6PQ6QN14 398 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 CASC1Q6TDU7 716 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 CYFIP1Q7L576 1253 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 TEX2Q8IWB9 1127 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 MICALL1Q8N3F8 863 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 CUL5Q93034 780 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 ATP6V0A1Q93050 837 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 ZFP91Q96JP5 570 aaPredicted RBP12.83□□□□□ -0.36
CBWD1-222ENST00000613508 RNPEPQ9H4A4 650 aa12.83□□□□□ -0.36
CBWD1-222ENST00000613508 SEC63Q9UGP8 760 aaKnown RBP12.83□□□□□ -0.36
CBWD1-222ENST00000613508 LINC01553A4QN01 128 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 TREHO43280 583 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 SORBS3O60504 671 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 HTRA4P83105 476 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-222ENST00000613508 TFF2Q03403 129 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 NECTIN1Q15223 517 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 SPRED2Q7Z698 418 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 TMCO2Q7Z6W1 182 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-222ENST00000613508 RPAINQ86UA6 219 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 SRBD1Q8N5C6 995 aaKnown RBP12.82□□□□□ -0.36
CBWD1-222ENST00000613508 DBF4BQ8NFT6 615 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 SMARCC2Q8TAQ2 1214 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-222ENST00000613508 GPRASP2Q96D09 838 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 CDHR1Q96JP9 859 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 TGS1Q96RS0 853 aaKnown RBP12.82□□□□□ -0.36
CBWD1-222ENST00000613508 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 MYL10Q9BUA6 226 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 PSTPIP2Q9H939 334 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 ZNF215Q9UL58 517 aaPredicted RBP12.82□□□□□ -0.36
CBWD1-222ENST00000613508 INSL6Q9Y581 213 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 COL4A6Q14031 1691 aa12.82□□□□□ -0.36
CBWD1-222ENST00000613508 SLC27A2O14975 620 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 PLEKHA8P1O95397 391 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 AMHP03971 560 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 FAM26DQ5JW98 314 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 KRT40Q6A162 431 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 NLRX1Q86UT6 975 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 SGMS1Q86VZ5 419 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 PIBF1Q8WXW3 757 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 SUGCTQ9HAC7 445 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 RTEL1Q9NZ71 1219 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 NRCAMQ92823 1304 aa12.81□□□□□ -0.36
CBWD1-222ENST00000613508 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-222ENST00000613508 CCDC69A6NI79 296 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 MAFGO15525 162 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 KCNA2P16389 499 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 ITGB5P18084 799 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 COL9A3Q14050 684 aaPredicted RBP12.8□□□□□ -0.36
CBWD1-222ENST00000613508 SKIV2LQ15477 1246 aaKnown RBP12.8□□□□□ -0.36
CBWD1-222ENST00000613508 CREB3L3Q68CJ9 461 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.8□□□□□ -0.36
CBWD1-222ENST00000613508 NFXL1Q6ZNB6 911 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 TRIM50Q86XT4 487 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 FANCBQ8NB91 859 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 LMBR1Q8WVP7 490 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 SEPT8Q92599 483 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 HLA-CQ95604 372 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 SETD4Q9NVD3 440 aa12.8□□□□□ -0.36
CBWD1-222ENST00000613508 SLC12A7Q9Y666 1083 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms