RNA–Protein interactions for RNA: ENST00000613355.4

CBWD1-221, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-221ENST00000613355 CAGE1Q8TC20 777 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 ZMYND12Q9H0C1 365 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 JADE2Q9NQC1 790 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 SH3GLB2Q9NR46 395 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
CBWD1-221ENST00000613355 H3BRB1 525 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 PITPNM1O00562 1244 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 PARNO95453 639 aaKnown RBP14.07□□□□□ -0.16
CBWD1-221ENST00000613355 ACTN1P12814 892 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 RFC2P35250 354 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 SP4Q02446 784 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 WASF1Q92558 559 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 MXRA8Q9BRK3 442 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 NOC4LQ9BVI4 516 aaKnown RBP14.07□□□□□ -0.16
CBWD1-221ENST00000613355 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
CBWD1-221ENST00000613355 NCOA5Q9HCD5 579 aaKnown RBP14.07□□□□□ -0.16
CBWD1-221ENST00000613355 IL23AQ9NPF7 189 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 UBIAD1Q9Y5Z9 338 aa14.07□□□□□ -0.16
CBWD1-221ENST00000613355 FGBP02675 491 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 LGALS2P05162 132 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 CYP2C9P11712 490 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 CSF2RAP15509 400 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 ITGB8P26012 769 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 SREBF1P36956 1147 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 CCL23P55773 120 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
CBWD1-221ENST00000613355 SP2Q02086 613 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 CEP55Q53EZ4 464 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 UTP14CQ5TAP6 766 aaKnown RBP14.06□□□□□ -0.16
CBWD1-221ENST00000613355 JAKMIP3Q5VZ66 844 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 AZI2Q9H6S1 392 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 GTF2IRD1Q9UHL9 959 aa14.06□□□□□ -0.16
CBWD1-221ENST00000613355 C17orf102A2RUQ5 167 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
CBWD1-221ENST00000613355 ARHGAP4P98171 946 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 GALNT17Q6IS24 598 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 TYW1BQ6NUM6 668 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 AFAP1L1Q8TED9 768 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 SEPT1Q8WYJ6 367 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 GLG1Q92896 1179 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 GPR20Q99678 358 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
CBWD1-221ENST00000613355 PKD2L1Q9P0L9 805 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 HDAC6Q9UBN7 1215 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 DNAH12Q6ZR08 3092 aa14.05□□□□□ -0.16
CBWD1-221ENST00000613355 TRIOBPQ9H2D6 2365 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.04□□□□□ -0.16
CBWD1-221ENST00000613355 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.04□□□□□ -0.16
CBWD1-221ENST00000613355 ITGB5P18084 799 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 TCF7P36402 384 aaPredicted RBP14.04□□□□□ -0.16
CBWD1-221ENST00000613355 CLK2P49760 499 aaKnown RBP14.04□□□□□ -0.16
CBWD1-221ENST00000613355 NEK4P51957 841 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 SMAD3P84022 425 aaKnown RBP14.04□□□□□ -0.16
CBWD1-221ENST00000613355 PTK7Q13308 1070 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 NTRK3Q16288 839 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 C9orf50Q5SZB4 431 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 ZNF697Q5TEC3 545 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 NIPA1Q7RTP0 329 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 KAT2BQ92831 832 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 PGBD1Q96JS3 809 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 FTOQ9C0B1 505 aaKnown RBP eCLIP14.04□□□□□ -0.16
CBWD1-221ENST00000613355 SMARCAD1Q9H4L7 1026 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 KCNH7Q9NS40 1196 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 TMEM260Q9NX78 707 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 ERAP1Q9NZ08 941 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 VPS54Q9P1Q0 977 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
CBWD1-221ENST00000613355 NFASCO94856 1347 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 DOCK5Q9H7D0 1870 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 ZBBXA8MT70 800 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 HAS3O00219 553 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 KCNA2P16389 499 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 SEMA3FQ13275 785 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 PKN1Q16512 942 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 GDF6Q6KF10 455 aaPredicted RBP14.03□□□□□ -0.16
CBWD1-221ENST00000613355 ZNF365Q70YC5 407 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 PLA2G4DQ86XP0 818 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 ATP6V0A1Q93050 837 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 LRCH3Q96II8 777 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.16
CBWD1-221ENST00000613355 LARP6Q9BRS8 491 aaKnown RBP14.03□□□□□ -0.16
CBWD1-221ENST00000613355 BRMS1Q9HCU9 246 aa14.03□□□□□ -0.16
CBWD1-221ENST00000613355 PFKFB2O60825 505 aa14.02□□□□□ -0.16
CBWD1-221ENST00000613355 RPLP2P05387 115 aaKnown RBP14.02□□□□□ -0.16
CBWD1-221ENST00000613355 ACRP10323 421 aa14.02□□□□□ -0.16
CBWD1-221ENST00000613355 AK2P54819 239 aa14.02□□□□□ -0.16
CBWD1-221ENST00000613355 TRIM29Q14134 588 aa14.02□□□□□ -0.16
CBWD1-221ENST00000613355 TMEM240Q5SV17 173 aa14.02□□□□□ -0.16
CBWD1-221ENST00000613355 DEFB123Q8N688 67 aa14.02□□□□□ -0.16
CBWD1-221ENST00000613355 SCLYQ96I15 445 aa14.02□□□□□ -0.16
CBWD1-221ENST00000613355 C16orf70Q9BSU1 422 aa14.02□□□□□ -0.16
CBWD1-221ENST00000613355 PCDH10Q9P2E7 1040 aa14.02□□□□□ -0.16
CBWD1-221ENST00000613355 PCDHA4Q9UN74 947 aa14.02□□□□□ -0.16
CBWD1-221ENST00000613355 STK36Q9NRP7 1315 aa14.02□□□□□ -0.17
CBWD1-221ENST00000613355 KAT6AQ92794 2004 aa14.02□□□□□ -0.17
CBWD1-221ENST00000613355 TANC1Q9C0D5 1861 aa14.01□□□□□ -0.17
CBWD1-221ENST00000613355 SOX1O00570 391 aaPredicted RBP14.01□□□□□ -0.17
CBWD1-221ENST00000613355 PPFIA3O75145 1194 aa14.01□□□□□ -0.17
CBWD1-221ENST00000613355 CYP3A4P08684 503 aa14.01□□□□□ -0.17
CBWD1-221ENST00000613355 IQCF3P0C7M6 154 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms