RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 DEPTORQ8TB45 409 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 FAM207AQ9NSI2 230 aaPredicted RBP11.92□□□□□ -0.5
FAM3A-221ENST00000612856 PCDHA4Q9UN74 947 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 STRCQ7RTU9 1775 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 GPR75-ASB3A0A0A6YYF3 556 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 TCRBV5S4A2TA0A5A2 114 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 ENC1O14682 589 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 PPFIA4O75335 1185 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 PGK2P07205 417 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 ZNF354CQ86Y25 554 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 KIRREL3Q8IZU9 778 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 ZNF280CQ8ND82 737 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 IGDCC4Q8TDY8 1250 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 CCDC114Q96M63 670 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 BHMT2Q9H2M3 363 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 PCDHA5Q9Y5H7 936 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 FAM169AQ9Y6X4 670 aa11.92□□□□□ -0.5
FAM3A-221ENST00000612856 PNMA6FA0A0J9YX94 578 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 ZBTB5O15062 677 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 CD19P15391 556 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 STRN3Q13033 797 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 SRGAP1Q7Z6B7 1085 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 REXO1L1PQ8IX06 675 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 FAM178BQ8IXR5 827 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 SLC5A4Q9NY91 659 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 ROBO1Q9Y6N7 1651 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 EP400Q96L91 3159 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 YEATS4O95619 227 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 RNASE9P60153 205 aaKnown RBP11.91□□□□□ -0.5
FAM3A-221ENST00000612856 MTF1Q14872 753 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 KCTD16Q68DU8 428 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 GSPT2Q8IYD1 628 aaKnown RBP11.91□□□□□ -0.5
FAM3A-221ENST00000612856 LINC00301Q8NCQ3 95 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 TRPM4Q8TD43 1214 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 PSMB7Q99436 277 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 CPA4Q9UI42 421 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 RCOR1Q9UKL0 485 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 MMP1P03956 469 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 DNM2P50570 870 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 LLGL1Q15334 1064 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 RCSD1Q6JBY9 416 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 FAM71BQ8TC56 605 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 NOC4LQ9BVI4 516 aaKnown RBP11.91□□□□□ -0.5
FAM3A-221ENST00000612856 TEKT3Q9BXF9 490 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 HOXC10Q9NYD6 342 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 PCDHA6Q9UN73 950 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 PCDHA8Q9Y5H6 950 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 TACC3Q9Y6A5 838 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 RFX7Q2KHR2 1363 aa11.91□□□□□ -0.5
FAM3A-221ENST00000612856 KRT9P35527 623 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 TAF12Q16514 161 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 HHIPL2Q6UWX4 724 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 LRRC27Q9C0I9 530 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 AP5M1Q9H0R1 490 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 KNL1Q8NG31 2342 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 SOWAHDA6NJG2 315 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 K7ENM7 598 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 TRPA1O75762 1119 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 MYBP10242 640 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 NLRP12P59046 1061 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 VSNL1P62760 191 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 PSMD1Q99460 953 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 ABL1P00519 1130 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 CYP2C8P10632 490 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 SCP2P22307 547 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 YY1P25490 414 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 CORO7P57737 925 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 TMEM62Q0P6H9 643 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 DACT2Q5SW24 774 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 LRRC31Q6UY01 552 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 IL17RAQ96F46 866 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 RIOK1Q9BRS2 568 aaKnown RBP11.9□□□□□ -0.5
FAM3A-221ENST00000612856 LUC7LQ9NQ29 371 aaKnown RBP11.9□□□□□ -0.5
FAM3A-221ENST00000612856 HERC5Q9UII4 1024 aaKnown RBP11.9□□□□□ -0.5
FAM3A-221ENST00000612856 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
FAM3A-221ENST00000612856 PARP4Q9UKK3 1724 aaKnown RBP11.9□□□□□ -0.5
FAM3A-221ENST00000612856 FMR1Q06787 632 aaKnown RBP eCLIP11.89□□□□□ -0.51
FAM3A-221ENST00000612856 FAM117BQ6P1L5 589 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 CYFIP1Q7L576 1253 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 VPS36Q86VN1 386 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 SLC35F6Q8N357 371 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 GLT8D2Q9H1C3 349 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 ALDH8A1Q9H2A2 487 aaPredicted RBP11.89□□□□□ -0.51
FAM3A-221ENST00000612856 NMRK2Q9NPI5 230 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 ADD3Q9UEY8 706 aaKnown RBP11.89□□□□□ -0.51
FAM3A-221ENST00000612856 PRR12Q9ULL5 1215 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 FRMD4BQ9Y2L6 1034 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 PTPRZ1P23471 2315 aaPredicted RBP11.89□□□□□ -0.51
FAM3A-221ENST00000612856 BCL9LQ86UU0 1499 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 POTEJP0CG39 1038 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 ZBTB33Q86T24 672 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 RTFDC1Q9BY42 306 aaPredicted RBP11.89□□□□□ -0.51
FAM3A-221ENST00000612856 RGL1Q9NZL6 768 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 ODF2LQ9ULJ1 636 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 GCKP35557 465 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 PPM1FP49593 454 aaPredicted RBP11.89□□□□□ -0.51
FAM3A-221ENST00000612856 COG2Q14746 738 aa11.89□□□□□ -0.51
FAM3A-221ENST00000612856 SND1Q7KZF4 910 aaKnown RBP eCLIP11.89□□□□□ -0.51
FAM3A-221ENST00000612856 GOLGA8IPA6NC78 632 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms