RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 ACER1Q8TDN7 264 aa13.02□□□□□ -0.32
PPP4R3B-204ENST00000612688 TRIM47Q96LD4 638 aa13.02□□□□□ -0.32
PPP4R3B-204ENST00000612688 CEP89Q96ST8 783 aa13.02□□□□□ -0.32
PPP4R3B-204ENST00000612688 TMEM60Q9H2L4 133 aa13.02□□□□□ -0.32
PPP4R3B-204ENST00000612688 JADE2Q9NQC1 790 aa13.02□□□□□ -0.32
PPP4R3B-204ENST00000612688 EPN1Q9Y6I3 576 aaPredicted RBP13.02□□□□□ -0.32
PPP4R3B-204ENST00000612688 PALM3A6NDB9 673 aaPredicted RBP13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 GOLGA6BA6NDN3 693 aa13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 ENTPD3O75355 529 aa13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 RPN1P04843 607 aaKnown RBP13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 NAPAP54920 295 aa13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 FAM151AQ8WW52 585 aa13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 SEC63Q9UGP8 760 aaKnown RBP13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 YBX3P16989 372 aaKnown RBP eCLIP13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 RCAN1P53805 252 aa13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 RNASE9P60153 205 aaKnown RBP13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 PFKFB3Q16875 520 aaPredicted RBP13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 INF2Q27J81 1249 aa13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 TRPM4Q8TD43 1214 aa13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 HACL1Q9UJ83 578 aa13.02□□□□□ -0.33
PPP4R3B-204ENST00000612688 BACH1O14867 736 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 NDUFA10O95299 355 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 SLFN13Q68D06 897 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 TRIML1Q8N9V2 468 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 LRRC15Q8TF66 581 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 ANKS1AQ92625 1134 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 GLIS2Q9BZE0 524 aaPredicted RBP13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 A0A1W2PRG0 241 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 USP17L10C9JJH3 530 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 GNAQP50148 359 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 ANGEL2Q5VTE6 544 aaKnown RBP13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 SH3RF1Q7Z6J0 888 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 IRF2BP1Q8IU81 584 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 MSL3Q8N5Y2 521 aaKnown RBP13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 ZNF579Q8NAF0 562 aaKnown RBP13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 HDAC7Q8WUI4 952 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 CCDC17Q96LX7 622 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 SELENOOQ9BVL4 669 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 KANSL2Q9H9L4 492 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 CNTNAP1P78357 1384 aa13.01□□□□□ -0.33
PPP4R3B-204ENST00000612688 MYH6P13533 1939 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 H7C1D1 291 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 PDE2AO00408 941 aaPredicted RBP13□□□□□ -0.33
PPP4R3B-204ENST00000612688 FCER1AP12319 257 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 TRIM21P19474 475 aaKnown RBP13□□□□□ -0.33
PPP4R3B-204ENST00000612688 NF2P35240 595 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 USP8P40818 1118 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 DGKZQ13574 1117 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 CYP26C1Q6V0L0 522 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 GSDMAQ96QA5 445 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 PCNTO95613 3336 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 F5H6K3 240 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 PRPF6O94906 941 aaKnown RBP13□□□□□ -0.33
PPP4R3B-204ENST00000612688 CPP00450 1065 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 GSCP56915 257 aaPredicted RBP13□□□□□ -0.33
PPP4R3B-204ENST00000612688 HERVK_113P62684 666 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 KLRC3Q07444 240 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 NBPF12Q5TAG4 269 aaPredicted RBP13□□□□□ -0.33
PPP4R3B-204ENST00000612688 LRCH2Q5VUJ6 765 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 NAIF1Q69YI7 327 aaPredicted RBP13□□□□□ -0.33
PPP4R3B-204ENST00000612688 PDXDC2PQ6P474 469 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 SIAH1Q8IUQ4 282 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 DEFB129Q9H1M3 183 aa13□□□□□ -0.33
PPP4R3B-204ENST00000612688 FZD9O00144 591 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 LMNB1P20700 586 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 PEX19P40855 299 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 GPR162Q16538 588 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 SWT1Q5T5J6 900 aaKnown RBP12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 TMEM179Q6ZVK1 233 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 CCDC155Q8N6L0 562 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 GJA10Q969M2 543 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 RUFY1Q96T51 708 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 VPS33BQ9H267 617 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 BIN2Q9UBW5 565 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 LUC7L2Q9Y383 392 aaKnown RBP12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 DLEC1Q9Y238 1755 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 IGKV6D-41A0A0C4DH26 115 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 APBA1Q02410 837 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 TMTC1Q8IUR5 882 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 ADGRF4Q8IZF3 695 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 PROCA1Q8NCQ7 364 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 CABS1Q96KC9 395 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 CTAGE1Q96RT6 745 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 MLXIPQ9HAP2 919 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 FAM207AQ9NSI2 230 aaPredicted RBP12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 NID2Q14112 1375 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 NCK2O43639 380 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 ZNF543Q08ER8 600 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 USH1GQ495M9 461 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 TATDN1Q6P1N9 297 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 WDR59Q6PJI9 974 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 DNAAF5Q86Y56 855 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 COG1Q8WTW3 980 aa12.99□□□□□ -0.33
PPP4R3B-204ENST00000612688 SMCO2A6NFE2 343 aa12.98□□□□□ -0.33
PPP4R3B-204ENST00000612688 EIF4E1BA6NMX2 242 aaKnown RBP12.98□□□□□ -0.33
PPP4R3B-204ENST00000612688 PPP1R12BO60237 982 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3B-204ENST00000612688 NDUFB10O96000 172 aa12.98□□□□□ -0.33
PPP4R3B-204ENST00000612688 SEC24CP53992 1094 aa12.98□□□□□ -0.33
PPP4R3B-204ENST00000612688 ATP2C1P98194 919 aaPredicted RBP12.98□□□□□ -0.33
PPP4R3B-204ENST00000612688 WHAMMP3Q1A5X7 153 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms