RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 DTNBO60941 627 aa20.62■□□□□ 0.89
SEMA3B-211ENST00000612509 ATP9AO75110 1047 aa20.62■□□□□ 0.89
SEMA3B-211ENST00000612509 CHMP4BP1P59074 171 aa20.62■□□□□ 0.89
SEMA3B-211ENST00000612509 ST3GAL1Q11201 340 aa20.62■□□□□ 0.89
SEMA3B-211ENST00000612509 GIMAP8Q8ND71 665 aaPredicted RBP20.62■□□□□ 0.89
SEMA3B-211ENST00000612509 CYP2W1Q8TAV3 490 aa20.62■□□□□ 0.89
SEMA3B-211ENST00000612509 UBE2OQ9C0C9 1292 aaKnown RBP20.62■□□□□ 0.89
SEMA3B-211ENST00000612509 TRPV6Q9H1D0 765 aa20.62■□□□□ 0.89
SEMA3B-211ENST00000612509 PCDHA4Q9UN74 947 aa20.62■□□□□ 0.89
SEMA3B-211ENST00000612509 MAFGO15525 162 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 PPFIA4O75335 1185 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 LGALS2P05162 132 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 CYP3A4P08684 503 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 PSEN2P49810 448 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 SP4Q02446 784 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 PTPN11Q06124 597 aaPredicted RBP20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 MFSD10Q14728 455 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 NPY5RQ15761 445 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 DAGLBQ8NCG7 672 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 NSUN7Q8NE18 718 aaKnown RBP20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 GPR20Q99678 358 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 KCNH7Q9NS40 1196 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 TRMT13Q9NUP7 481 aaKnown RBP20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 ORC3Q9UBD5 711 aaPredicted RBP20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 TELO2Q9Y4R8 837 aa20.61■□□□□ 0.89
SEMA3B-211ENST00000612509 HAS3O00219 553 aa20.6■□□□□ 0.89
SEMA3B-211ENST00000612509 TIMP1P01033 207 aa20.6■□□□□ 0.89
SEMA3B-211ENST00000612509 ZNF76P36508 570 aa20.6■□□□□ 0.89
SEMA3B-211ENST00000612509 SESTD1Q86VW0 696 aa20.6■□□□□ 0.89
SEMA3B-211ENST00000612509 C16orf70Q9BSU1 422 aa20.6■□□□□ 0.89
SEMA3B-211ENST00000612509 PPP1R12CQ9BZL4 782 aa20.6■□□□□ 0.89
SEMA3B-211ENST00000612509 LIMCH1Q9UPQ0 1083 aa20.6■□□□□ 0.89
SEMA3B-211ENST00000612509 TANC1Q9C0D5 1861 aa20.6■□□□□ 0.89
SEMA3B-211ENST00000612509 FAM86B1E9PN63 330 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 MEIS1O00470 390 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 SLC34A2O95436 690 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 FAM86B2P0C5J1 330 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 ARP10275 920 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 RABEP1Q15276 862 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 KIAA0753Q2KHM9 967 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 GALNT17Q6IS24 598 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 NIPA1Q7RTP0 329 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 TDHQ8IZJ6 230 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 BLIDQ8IZY5 108 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 WASF1Q92558 559 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 ALG1Q9BT22 464 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 HIPK3Q9H422 1215 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 KCNJ14Q9UNX9 436 aa20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 RANBP2P49792 3224 aaKnown RBP20.59■□□□□ 0.89
SEMA3B-211ENST00000612509 IGLV3-22A0A075B6J6 115 aa20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 M0R2N6 131 aa20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 JAK2O60674 1132 aa20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 SUPT20HL2P0C7V6 817 aa20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 FDPSP14324 419 aaKnown RBP20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 XBP1P17861 261 aa20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 SETQ01105 290 aaPredicted RBP20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 PLA2G4DQ86XP0 818 aa20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 TRIM50Q86XT4 487 aa20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 PHF20Q9BVI0 1012 aa20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 NOC4LQ9BVI4 516 aaKnown RBP20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 AGO4Q9HCK5 861 aaKnown RBP20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 JPH1Q9HDC5 661 aaPredicted RBP20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 GTF2IRD1Q9UHL9 959 aa20.58■□□□□ 0.89
SEMA3B-211ENST00000612509 NFASCO94856 1347 aa20.57■□□□□ 0.88
SEMA3B-211ENST00000612509 UMODL1Q5DID0 1318 aa20.57■□□□□ 0.88
SEMA3B-211ENST00000612509 CYP2C9P11712 490 aa20.57■□□□□ 0.88
SEMA3B-211ENST00000612509 FPGSQ05932 587 aa20.57■□□□□ 0.88
SEMA3B-211ENST00000612509 ITGB3BPQ13352 177 aaPredicted RBP20.57■□□□□ 0.88
SEMA3B-211ENST00000612509 MFSD5Q6N075 450 aa20.57■□□□□ 0.88
SEMA3B-211ENST00000612509 C7orf31Q8N865 590 aa20.57■□□□□ 0.88
SEMA3B-211ENST00000612509 TBC1D32Q96NH3 1257 aa20.57■□□□□ 0.88
SEMA3B-211ENST00000612509 SDF4Q9BRK5 362 aa20.57■□□□□ 0.88
SEMA3B-211ENST00000612509 HDAC6Q9UBN7 1215 aa20.57■□□□□ 0.88
SEMA3B-211ENST00000612509 H3BRB1 525 aa20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 CIITAP33076 1130 aa20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 CYP2C18P33260 490 aa20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 TCF7P36402 384 aaPredicted RBP20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 UTP14CQ5TAP6 766 aaKnown RBP20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 GDF6Q6KF10 455 aaPredicted RBP20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 CCDC83Q8IWF9 413 aa20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 TBCKQ8TEA7 893 aa20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 TUT1Q9H6E5 874 aaKnown RBP20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 SH2B1Q9NRF2 756 aaPredicted RBP20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 GJB4Q9NTQ9 266 aa20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 SLC9A2Q9UBY0 812 aa20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 ZNF215Q9UL58 517 aaPredicted RBP20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 NOD1Q9Y239 953 aa20.56■□□□□ 0.88
SEMA3B-211ENST00000612509 PTGISQ16647 500 aa20.55■□□□□ 0.88
SEMA3B-211ENST00000612509 SEPT1Q8WYJ6 367 aa20.55■□□□□ 0.88
SEMA3B-211ENST00000612509 ZSCAN31Q96LW9 406 aaPredicted RBP20.55■□□□□ 0.88
SEMA3B-211ENST00000612509 CTAGE1Q96RT6 745 aa20.55■□□□□ 0.88
SEMA3B-211ENST00000612509 WNT8AQ9H1J5 351 aa20.55■□□□□ 0.88
SEMA3B-211ENST00000612509 GSTTP1A0A1W2PQM5 241 aa20.54■□□□□ 0.88
SEMA3B-211ENST00000612509 EDIL3O43854 480 aa20.54■□□□□ 0.88
SEMA3B-211ENST00000612509 ST18O60284 1047 aa20.54■□□□□ 0.88
SEMA3B-211ENST00000612509 FXR1P51114 621 aaKnown RBP eCLIP20.54■□□□□ 0.88
SEMA3B-211ENST00000612509 EPHB4P54760 987 aa20.54■□□□□ 0.88
SEMA3B-211ENST00000612509 PPIGQ13427 754 aaKnown RBP eCLIP20.54■□□□□ 0.885e-8■■□□□ 12.2
SEMA3B-211ENST00000612509 PRR16Q569H4 304 aa20.54■□□□□ 0.88
SEMA3B-211ENST00000612509 KRT25Q7Z3Z0 450 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms