RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 LINC00271P0C7V0 271 aa12.1□□□□□ -0.47
SSX3-204ENST00000612497 NRIP1P48552 1158 aa12.1□□□□□ -0.47
SSX3-204ENST00000612497 PPARAQ07869 468 aa12.1□□□□□ -0.47
SSX3-204ENST00000612497 CAMK1Q14012 370 aa12.1□□□□□ -0.47
SSX3-204ENST00000612497 STXBP2Q15833 593 aa12.1□□□□□ -0.47
SSX3-204ENST00000612497 ADGRD2Q7Z7M1 963 aa12.1□□□□□ -0.47
SSX3-204ENST00000612497 RBM23Q86U06 439 aaKnown RBP12.1□□□□□ -0.47
SSX3-204ENST00000612497 PPTC7Q8NI37 304 aa12.1□□□□□ -0.47
SSX3-204ENST00000612497 APBB2Q92870 758 aa12.1□□□□□ -0.47
SSX3-204ENST00000612497 EMID1Q96A84 441 aaPredicted RBP12.1□□□□□ -0.47
SSX3-204ENST00000612497 PLVAPQ9BX97 442 aa12.1□□□□□ -0.47
SSX3-204ENST00000612497 DDX41Q9UJV9 622 aaKnown RBP12.1□□□□□ -0.47
SSX3-204ENST00000612497 PLAGL2Q9UPG8 496 aa12.1□□□□□ -0.47
SSX3-204ENST00000612497 DMDP11532 3685 aa12.09□□□□□ -0.47
SSX3-204ENST00000612497 MED19A0JLT2 244 aaPredicted RBP12.09□□□□□ -0.47
SSX3-204ENST00000612497 C17orf102A2RUQ5 167 aa12.09□□□□□ -0.47
SSX3-204ENST00000612497 M0R2C6 588 aa12.09□□□□□ -0.47
SSX3-204ENST00000612497 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
SSX3-204ENST00000612497 BTG3Q14201 252 aaPredicted RBP12.09□□□□□ -0.47
SSX3-204ENST00000612497 USH1GQ495M9 461 aa12.09□□□□□ -0.47
SSX3-204ENST00000612497 MCTP2Q6DN12 878 aa12.09□□□□□ -0.47
SSX3-204ENST00000612497 NSUN6Q8TEA1 469 aaKnown RBP12.09□□□□□ -0.47
SSX3-204ENST00000612497 CLP1Q92989 425 aaKnown RBP12.09□□□□□ -0.47
SSX3-204ENST00000612497 NAPBQ9H115 298 aa12.09□□□□□ -0.47
SSX3-204ENST00000612497 MRVI1Q9Y6F6 885 aa12.09□□□□□ -0.47
SSX3-204ENST00000612497 SORBS3O60504 671 aa12.08□□□□□ -0.48
SSX3-204ENST00000612497 RANBP6O60518 1105 aaKnown RBP12.08□□□□□ -0.48
SSX3-204ENST00000612497 HMMRO75330 724 aa12.08□□□□□ -0.48
SSX3-204ENST00000612497 PPFIA4O75335 1185 aa12.08□□□□□ -0.48
SSX3-204ENST00000612497 DNAJB1P25685 340 aa12.08□□□□□ -0.48
SSX3-204ENST00000612497 TMEM105Q8N8V8 129 aa12.08□□□□□ -0.48
SSX3-204ENST00000612497 KBTBD3Q8NAB2 608 aa12.08□□□□□ -0.48
SSX3-204ENST00000612497 TAAR1Q96RJ0 339 aa12.08□□□□□ -0.48
SSX3-204ENST00000612497 TPRP12270 2363 aaKnown RBP12.08□□□□□ -0.48
SSX3-204ENST00000612497 EP300Q09472 2414 aaPredicted RBP12.08□□□□□ -0.48
SSX3-204ENST00000612497 EPG5Q9HCE0 2579 aa12.08□□□□□ -0.48
SSX3-204ENST00000612497 WDR19Q8NEZ3 1342 aa12.08□□□□□ -0.48
SSX3-204ENST00000612497 KAT6AQ92794 2004 aa12.08□□□□□ -0.48
SSX3-204ENST00000612497 ZNF292O60281 2723 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 TREHO43280 583 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 CAND2O75155 1236 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 GLP2RO95838 553 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 ZFYP08048 801 aaPredicted RBP12.07□□□□□ -0.48
SSX3-204ENST00000612497 ATF7P17544 494 aaPredicted RBP12.07□□□□□ -0.48
SSX3-204ENST00000612497 TTC3P53804 2025 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 CTDSPL2Q05D32 466 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 DGLUCYQ7Z3D6 616 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 RGS22Q8NE09 1264 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 SPPL3Q8TCT6 385 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 SYTL5Q8TDW5 730 aaPredicted RBP12.07□□□□□ -0.48
SSX3-204ENST00000612497 TBC1D5Q92609 795 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 P2RX5Q93086 422 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 SPATA33Q96N06 139 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 IWS1Q96ST2 819 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 RMDN3Q96TC7 470 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 TLE6Q9H808 572 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 KIAA1671Q9BY89 1806 aa12.07□□□□□ -0.48
SSX3-204ENST00000612497 EIF3JO75822 258 aaKnown RBP12.06□□□□□ -0.48
SSX3-204ENST00000612497 ITGB1P05556 798 aa12.06□□□□□ -0.48
SSX3-204ENST00000612497 SMIM10L2AP0DMW4 78 aa12.06□□□□□ -0.48
SSX3-204ENST00000612497 SMIM10L2BP0DMW5 78 aa12.06□□□□□ -0.48
SSX3-204ENST00000612497 TOP1P11387 765 aaKnown RBP12.06□□□□□ -0.48
SSX3-204ENST00000612497 HOXD8P13378 290 aaPredicted RBP12.06□□□□□ -0.48
SSX3-204ENST00000612497 SP100P23497 879 aaPredicted RBP12.06□□□□□ -0.48
SSX3-204ENST00000612497 ARHGEF16Q5VV41 709 aa12.06□□□□□ -0.48
SSX3-204ENST00000612497 POF1BQ8WVV4 589 aa12.06□□□□□ -0.48
SSX3-204ENST00000612497 RMDN1Q96DB5 314 aa12.06□□□□□ -0.48
SSX3-204ENST00000612497 C16orf70Q9BSU1 422 aa12.06□□□□□ -0.48
SSX3-204ENST00000612497 COL20A1Q9P218 1284 aa12.06□□□□□ -0.48
SSX3-204ENST00000612497 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.06□□□□□ -0.48
SSX3-204ENST00000612497 H3BRB1 525 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 PER2O15055 1255 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 EIF2AK2P19525 551 aaKnown RBP12.05□□□□□ -0.48
SSX3-204ENST00000612497 NOVP48745 357 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 HSDL1Q3SXM5 330 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 NAALADL2Q58DX5 795 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 MYSM1Q5VVJ2 828 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 KLHL23Q8NBE8 558 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 KREMEN2Q8NCW0 462 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 MICAL1Q8TDZ2 1067 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 SUSD6Q92537 303 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 TMEM47Q9BQJ4 181 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 RNPEPQ9H4A4 650 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 TUT1Q9H6E5 874 aaKnown RBP12.05□□□□□ -0.48
SSX3-204ENST00000612497 RC3H2Q9HBD1 1191 aaKnown RBP12.05□□□□□ -0.48
SSX3-204ENST00000612497 ECHDC1Q9NTX5 307 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 PCDHGC5Q9Y5F6 944 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 MRPL42Q9Y6G3 142 aaKnown RBP12.05□□□□□ -0.48
SSX3-204ENST00000612497 NCOR2Q9Y618 2525 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 MYH6P13533 1939 aa12.05□□□□□ -0.48
SSX3-204ENST00000612497 PLXNA4Q9HCM2 1894 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 ENPP3O14638 875 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 DGKIO75912 1065 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 GGPS1O95749 300 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 NR3C2P08235 984 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 PDHBP11177 359 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 GNAT1P11488 350 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 RBM10P98175 930 aaKnown RBP12.04□□□□□ -0.48
SSX3-204ENST00000612497 ZNF543Q08ER8 600 aa12.04□□□□□ -0.48
SSX3-204ENST00000612497 MTMR3Q13615 1198 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms