RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 SEMA6BQ9H3T3 888 aa16.32■□□□□ 0.2
CDH1-213ENST00000612417 TMEM260Q9NX78 707 aa16.32■□□□□ 0.2
CDH1-213ENST00000612417 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.32■□□□□ 0.2
CDH1-213ENST00000612417 TRIM10Q9UDY6 481 aa16.32■□□□□ 0.2
CDH1-213ENST00000612417 LRWD1Q9UFC0 647 aa16.32■□□□□ 0.2
CDH1-213ENST00000612417 EDIL3O43854 480 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 TFRCP02786 760 aaKnown RBP16.31■□□□□ 0.2
CDH1-213ENST00000612417 CCDC122Q5T0U0 273 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 WDR93Q6P2C0 686 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 HDXQ7Z353 690 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 LARP4BQ92615 738 aaKnown RBP16.31■□□□□ 0.2
CDH1-213ENST00000612417 PNMA5Q96PV4 448 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 PURBQ96QR8 312 aaKnown RBP16.31■□□□□ 0.2
CDH1-213ENST00000612417 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 GBP3Q9H0R5 595 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 L1RE1Q9UN81 338 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 CCDC66A2RUB6 948 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 PPP1R11O60927 126 aaPredicted RBP16.31■□□□□ 0.2
CDH1-213ENST00000612417 TXKP42681 527 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 ZYXQ15942 572 aaKnown RBP16.31■□□□□ 0.2
CDH1-213ENST00000612417 QRICH1Q2TAL8 776 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 FKBP15Q5T1M5 1219 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 TEX2Q8IWB9 1127 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 GPC2Q8N158 579 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 GUF1Q8N442 669 aaKnown RBP16.31■□□□□ 0.2
CDH1-213ENST00000612417 TEPSINQ96N21 525 aa16.31■□□□□ 0.2
CDH1-213ENST00000612417 NHEJ1Q9H9Q4 299 aaPredicted RBP16.31■□□□□ 0.2
CDH1-213ENST00000612417 ANO9A1A5B4 782 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 MYMKA6NI61 221 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 SLC37A4O43826 429 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 IPO7O95373 1038 aaKnown RBP16.3■□□□□ 0.2
CDH1-213ENST00000612417 ASNSP08243 561 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 SNAP25P60880 206 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 EHHADHQ08426 723 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 CDC37Q16543 378 aaPredicted RBP16.3■□□□□ 0.2
CDH1-213ENST00000612417 SYDE2Q5VT97 1194 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 PPP4R3AQ6IN85 833 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 JAKMIP2Q96AA8 810 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 MTMR8Q96EF0 704 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 RPGRIP1Q96KN7 1286 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 LRRC27Q9C0I9 530 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 GPRC5DQ9NZD1 345 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 SYNPO2Q9UMS6 1093 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 TMX2Q9Y320 296 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 POLR3GO15318 223 aaPredicted RBP16.3■□□□□ 0.2
CDH1-213ENST00000612417 FGFR1OPO95684 399 aaKnown RBP16.3■□□□□ 0.2
CDH1-213ENST00000612417 KLK7P49862 253 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 VSNL1P62760 191 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 MAP3K10Q02779 954 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 LRRC63Q05C16 580 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 TMEM119Q4V9L6 283 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 ANGEL2Q5VTE6 544 aaKnown RBP16.3■□□□□ 0.2
CDH1-213ENST00000612417 NCAPH2Q6IBW4 605 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 KIAA1328Q86T90 577 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 NOA1Q8NC60 698 aaKnown RBP16.3■□□□□ 0.2
CDH1-213ENST00000612417 SH2D4AQ9H788 454 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 RIC8AQ9NPQ8 531 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 PLAGL2Q9UPG8 496 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 PCDHA1Q9Y5I3 950 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 SAR1BQ9Y6B6 198 aa16.3■□□□□ 0.2
CDH1-213ENST00000612417 ATAD5Q96QE3 1844 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 TDP2O95551 362 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 CLK2P49760 499 aaKnown RBP16.29■□□□□ 0.2
CDH1-213ENST00000612417 PSMD2Q13200 908 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 MCM6Q14566 821 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 VWA3BQ502W6 1294 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 CCDC84Q86UT8 332 aaPredicted RBP16.29■□□□□ 0.2
CDH1-213ENST00000612417 TRPM4Q8TD43 1214 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 RAD54LQ92698 747 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 CUL5Q93034 780 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 CDK5RAP3Q96JB5 506 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 TSGA10Q9BZW7 698 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 PSTPIP2Q9H939 334 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 ABCB6Q9NP58 842 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 SLC39A2Q9NP94 309 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 RNF181Q9P0P0 153 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 SIK3Q9Y2K2 1263 aa16.29■□□□□ 0.2
CDH1-213ENST00000612417 ATP1A1P05023 1023 aaKnown RBP16.28■□□□□ 0.2
CDH1-213ENST00000612417 RHOXF2BP0C7M4 288 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 MRPL12P52815 198 aaKnown RBP16.28■□□□□ 0.2
CDH1-213ENST00000612417 MAN2A1Q16706 1144 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 FAM83BQ5T0W9 1011 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 NBPF12Q5TAG4 269 aaPredicted RBP16.28■□□□□ 0.2
CDH1-213ENST00000612417 EEF2KMTQ96G04 330 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 RHOXF2Q9BQY4 288 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 RCCD1A6NED2 376 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 PHF20L1A8MW92 1017 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 CHRM1P11229 460 aaPredicted RBP16.28■□□□□ 0.2
CDH1-213ENST00000612417 EPS15P42566 896 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 VAV2P52735 878 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 GPS2Q13227 327 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 UBE2SQ16763 222 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 KIAA1755Q5JYT7 1200 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 SAMD1Q6SPF0 538 aaPredicted RBP16.28■□□□□ 0.2
CDH1-213ENST00000612417 APOBEC3FQ8IUX4 373 aaKnown RBP16.28■□□□□ 0.2
CDH1-213ENST00000612417 HPS3Q969F9 1004 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 LACRTQ9GZZ8 138 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 NDST4Q9H3R1 872 aa16.28■□□□□ 0.2
CDH1-213ENST00000612417 POLR2AP24928 1970 aaKnown RBP16.28■□□□□ 0.2
CDH1-213ENST00000612417 POTEMA6NI47 508 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms