RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 TOB2Q14106 344 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-208ENST00000612050 SHHQ15465 462 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 SESTD1Q86VW0 696 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 FAM177A1Q8N128 213 aaPredicted RBP14.07□□□□□ -0.16
CBWD3-208ENST00000612050 CAGE1Q8TC20 777 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 ZMYND12Q9H0C1 365 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 JADE2Q9NQC1 790 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 SH3GLB2Q9NR46 395 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 TRMT13Q9NUP7 481 aaKnown RBP14.07□□□□□ -0.16
CBWD3-208ENST00000612050 H3BRB1 525 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 PITPNM1O00562 1244 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 PARNO95453 639 aaKnown RBP14.07□□□□□ -0.16
CBWD3-208ENST00000612050 ACTN1P12814 892 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 RFC2P35250 354 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 SP4Q02446 784 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 WASF1Q92558 559 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 MXRA8Q9BRK3 442 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 NOC4LQ9BVI4 516 aaKnown RBP14.07□□□□□ -0.16
CBWD3-208ENST00000612050 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
CBWD3-208ENST00000612050 NCOA5Q9HCD5 579 aaKnown RBP14.07□□□□□ -0.16
CBWD3-208ENST00000612050 IL23AQ9NPF7 189 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 UBIAD1Q9Y5Z9 338 aa14.07□□□□□ -0.16
CBWD3-208ENST00000612050 FGBP02675 491 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 LGALS2P05162 132 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 CYP2C9P11712 490 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 CSF2RAP15509 400 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 ITGB8P26012 769 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 SREBF1P36956 1147 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 CCL23P55773 120 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 SETQ01105 290 aaPredicted RBP14.06□□□□□ -0.16
CBWD3-208ENST00000612050 SP2Q02086 613 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 CEP55Q53EZ4 464 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 UTP14CQ5TAP6 766 aaKnown RBP14.06□□□□□ -0.16
CBWD3-208ENST00000612050 JAKMIP3Q5VZ66 844 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 AZI2Q9H6S1 392 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 GTF2IRD1Q9UHL9 959 aa14.06□□□□□ -0.16
CBWD3-208ENST00000612050 C17orf102A2RUQ5 167 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 HOXD8P13378 290 aaPredicted RBP14.05□□□□□ -0.16
CBWD3-208ENST00000612050 ARHGAP4P98171 946 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 GALNT17Q6IS24 598 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 TYW1BQ6NUM6 668 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 AFAP1L1Q8TED9 768 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 SEPT1Q8WYJ6 367 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 GLG1Q92896 1179 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 GPR20Q99678 358 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 JPH1Q9HDC5 661 aaPredicted RBP14.05□□□□□ -0.16
CBWD3-208ENST00000612050 PKD2L1Q9P0L9 805 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 HDAC6Q9UBN7 1215 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 DNAH12Q6ZR08 3092 aa14.05□□□□□ -0.16
CBWD3-208ENST00000612050 TRIOBPQ9H2D6 2365 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.04□□□□□ -0.16
CBWD3-208ENST00000612050 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.04□□□□□ -0.16
CBWD3-208ENST00000612050 ITGB5P18084 799 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 TCF7P36402 384 aaPredicted RBP14.04□□□□□ -0.16
CBWD3-208ENST00000612050 CLK2P49760 499 aaKnown RBP14.04□□□□□ -0.16
CBWD3-208ENST00000612050 NEK4P51957 841 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 SMAD3P84022 425 aaKnown RBP14.04□□□□□ -0.16
CBWD3-208ENST00000612050 PTK7Q13308 1070 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 NTRK3Q16288 839 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 C9orf50Q5SZB4 431 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 ZNF697Q5TEC3 545 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 NIPA1Q7RTP0 329 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 KAT2BQ92831 832 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 PGBD1Q96JS3 809 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 FTOQ9C0B1 505 aaKnown RBP eCLIP14.04□□□□□ -0.16
CBWD3-208ENST00000612050 SMARCAD1Q9H4L7 1026 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 KCNH7Q9NS40 1196 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 TMEM260Q9NX78 707 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 ERAP1Q9NZ08 941 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 VPS54Q9P1Q0 977 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 SLC9A2Q9UBY0 812 aa14.04□□□□□ -0.16
CBWD3-208ENST00000612050 NFASCO94856 1347 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 DOCK5Q9H7D0 1870 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 ZBBXA8MT70 800 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 HAS3O00219 553 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 KCNA2P16389 499 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 SEMA3FQ13275 785 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 PKN1Q16512 942 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 GDF6Q6KF10 455 aaPredicted RBP14.03□□□□□ -0.16
CBWD3-208ENST00000612050 ZNF365Q70YC5 407 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 PLA2G4DQ86XP0 818 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 ATP6V0A1Q93050 837 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 LRCH3Q96II8 777 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.03□□□□□ -0.16
CBWD3-208ENST00000612050 LARP6Q9BRS8 491 aaKnown RBP14.03□□□□□ -0.16
CBWD3-208ENST00000612050 BRMS1Q9HCU9 246 aa14.03□□□□□ -0.16
CBWD3-208ENST00000612050 PFKFB2O60825 505 aa14.02□□□□□ -0.16
CBWD3-208ENST00000612050 RPLP2P05387 115 aaKnown RBP14.02□□□□□ -0.16
CBWD3-208ENST00000612050 ACRP10323 421 aa14.02□□□□□ -0.16
CBWD3-208ENST00000612050 AK2P54819 239 aa14.02□□□□□ -0.16
CBWD3-208ENST00000612050 TRIM29Q14134 588 aa14.02□□□□□ -0.16
CBWD3-208ENST00000612050 TMEM240Q5SV17 173 aa14.02□□□□□ -0.16
CBWD3-208ENST00000612050 DEFB123Q8N688 67 aa14.02□□□□□ -0.16
CBWD3-208ENST00000612050 SCLYQ96I15 445 aa14.02□□□□□ -0.16
CBWD3-208ENST00000612050 C16orf70Q9BSU1 422 aa14.02□□□□□ -0.16
CBWD3-208ENST00000612050 PCDH10Q9P2E7 1040 aa14.02□□□□□ -0.16
CBWD3-208ENST00000612050 PCDHA4Q9UN74 947 aa14.02□□□□□ -0.16
CBWD3-208ENST00000612050 STK36Q9NRP7 1315 aa14.02□□□□□ -0.17
CBWD3-208ENST00000612050 KAT6AQ92794 2004 aa14.02□□□□□ -0.17
CBWD3-208ENST00000612050 TANC1Q9C0D5 1861 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms