RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 ELOA2Q8IYF1 753 aaPredicted RBP13.55□□□□□ -0.24
CDH1-212ENST00000611625 ADSSL1Q8N142 457 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 SUPT20HQ8NEM7 779 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
CDH1-212ENST00000611625 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.55□□□□□ -0.24
CDH1-212ENST00000611625 PPIP5K2O43314 1243 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 PRPF6O94906 941 aaKnown RBP13.54□□□□□ -0.24
CDH1-212ENST00000611625 ALAS1P13196 640 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 PLTPP55058 493 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 ORC2Q13416 577 aaPredicted RBP13.54□□□□□ -0.24
CDH1-212ENST00000611625 NFRKBQ6P4R8 1299 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 PPFIBP2Q8ND30 876 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 RAD54LQ92698 747 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 RUNDC3BQ96NL0 473 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 OSBPL9Q96SU4 736 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 HPSEQ9Y251 543 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
CDH1-212ENST00000611625 MAP2K2P36507 400 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 OTUD6AQ7L8S5 288 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 REXO1L1PQ8IX06 675 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 AP1M1Q9BXS5 423 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 INTS9Q9NV88 658 aaKnown RBP13.54□□□□□ -0.24
CDH1-212ENST00000611625 THAP12O43422 761 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 IFNB1P01574 187 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 GFPT1Q06210 699 aaPredicted RBP13.54□□□□□ -0.24
CDH1-212ENST00000611625 CDC37Q16543 378 aaPredicted RBP13.54□□□□□ -0.24
CDH1-212ENST00000611625 ZNF34Q8IZ26 560 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 STMN2Q93045 179 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 VTI1AQ96AJ9 217 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 CEP95Q96GE4 821 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 CEP63Q96MT8 703 aa13.54□□□□□ -0.24
CDH1-212ENST00000611625 TESPA1A2RU30 521 aaPredicted RBP13.53□□□□□ -0.24
CDH1-212ENST00000611625 ANKRD65E5RJM6 399 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 DLATP10515 647 aaKnown RBP13.53□□□□□ -0.24
CDH1-212ENST00000611625 FCER1AP12319 257 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 UBXN2AP68543 259 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 FAM83BQ5T0W9 1011 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
CDH1-212ENST00000611625 BHMT2Q9H2M3 363 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 TMEM260Q9NX78 707 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 CYP2C19P33261 490 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 IFNAR2P48551 515 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 PDCLQ13371 301 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 TMC4Q7Z404 712 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 RNF10Q8N5U6 811 aaKnown RBP13.53□□□□□ -0.24
CDH1-212ENST00000611625 COG1Q8WTW3 980 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 IL17RAQ96F46 866 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 WDR11Q9BZH6 1224 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 TRIM9Q9C026 710 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 KLHL14Q9P2G3 628 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 HMGB1P1B2RPK0 211 aaPredicted RBP13.53□□□□□ -0.24
CDH1-212ENST00000611625 GYPCP04921 128 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 COASYQ13057 564 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 PICK1Q9NRD5 415 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 TYW1Q9NV66 732 aaKnown RBP13.53□□□□□ -0.24
CDH1-212ENST00000611625 KCNG1Q9UIX4 513 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 ZNF335Q9H4Z2 1342 aaPredicted RBP13.53□□□□□ -0.24
CDH1-212ENST00000611625 RPS6KA4O75676 772 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 GDF11O95390 407 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 BMP3P12645 472 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 CUL1Q13616 776 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 ANKRD40Q6AI12 368 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 NACC1Q96RE7 527 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 PARVGQ9HBI0 331 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 NARFQ9UHQ1 456 aa13.53□□□□□ -0.24
CDH1-212ENST00000611625 TCP10L2B9ZVM9 353 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 CCDC188H7C350 402 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 ZNF131P52739 623 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 CCDC197Q8NCU1 140 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 ZNF577Q9BSK1 485 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 PCDHA6Q9UN73 950 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 PTPN22Q9Y2R2 807 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 PCDHA8Q9Y5H6 950 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 UBE2Q2LH0YL09 131 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 NCK2O43639 380 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 ATF2P15336 505 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 HSPA6P17066 643 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 PCK1P35558 622 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 NT5C1BQ96P26 610 aa13.52□□□□□ -0.24
CDH1-212ENST00000611625 CTNND1O60716 968 aaKnown RBP13.52□□□□□ -0.25
CDH1-212ENST00000611625 AOC3Q16853 763 aa13.52□□□□□ -0.25
CDH1-212ENST00000611625 CCDC13Q8IYE1 715 aa13.52□□□□□ -0.25
CDH1-212ENST00000611625 ZNF653Q96CK0 615 aa13.52□□□□□ -0.25
CDH1-212ENST00000611625 FMO2Q99518 471 aa13.52□□□□□ -0.25
CDH1-212ENST00000611625 NOVA2Q9UNW9 492 aaKnown RBP13.52□□□□□ -0.25
CDH1-212ENST00000611625 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.52□□□□□ -0.25
CDH1-212ENST00000611625 TARSL2A2RTX5 802 aaKnown RBP13.52□□□□□ -0.25
CDH1-212ENST00000611625 E9PMD0 336 aa13.52□□□□□ -0.25
CDH1-212ENST00000611625 NDC80O14777 642 aa13.52□□□□□ -0.25
CDH1-212ENST00000611625 MFAP3P55082 362 aa13.52□□□□□ -0.25
CDH1-212ENST00000611625 C12orf60Q5U649 245 aa13.52□□□□□ -0.25
CDH1-212ENST00000611625 MAP3K14Q99558 947 aa13.52□□□□□ -0.25
CDH1-212ENST00000611625 DHX36Q9H2U1 1008 aaKnown RBP13.52□□□□□ -0.25
CDH1-212ENST00000611625 SERPINA10Q9UK55 444 aa13.52□□□□□ -0.25
CDH1-212ENST00000611625 LIG4P49917 911 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 MMS19Q96T76 1030 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 STK38LQ9Y2H1 464 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 PXDNQ92626 1479 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 ZBTB5O15062 677 aa13.51□□□□□ -0.25
CDH1-212ENST00000611625 TDP2O95551 362 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms