RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 UBLCP1Q8WVY7 318 aaPredicted RBP22.47■■□□□ 1.19
SSBP3-216ENST00000610401 SPAG5Q96R06 1193 aa22.47■■□□□ 1.19
SSBP3-216ENST00000610401 STRCP1A6NGW2 1772 aa22.47■■□□□ 1.19
SSBP3-216ENST00000610401 PCNTO95613 3336 aa22.47■■□□□ 1.19
SSBP3-216ENST00000610401 HGSNATQ68CP4 663 aa22.46■■□□□ 1.19
SSBP3-216ENST00000610401 GOLGA8KD6RF30 607 aa22.46■■□□□ 1.19
SSBP3-216ENST00000610401 HDLBPQ00341 1268 aaKnown RBP22.46■■□□□ 1.19
SSBP3-216ENST00000610401 SBK1Q52WX2 424 aa22.46■■□□□ 1.19
SSBP3-216ENST00000610401 SEPT11Q9NVA2 429 aaKnown RBP22.46■■□□□ 1.19
SSBP3-216ENST00000610401 RIMBP2O15034 1052 aa22.46■■□□□ 1.19
SSBP3-216ENST00000610401 FAM98CQ17RN3 349 aaKnown RBP22.46■■□□□ 1.19
SSBP3-216ENST00000610401 FAM26FQ5R3K3 315 aa22.46■■□□□ 1.19
SSBP3-216ENST00000610401 LRRC55Q6ZSA7 311 aa22.46■■□□□ 1.19
SSBP3-216ENST00000610401 TAF4BQ92750 862 aa22.46■■□□□ 1.19
SSBP3-216ENST00000610401 COL4A3BPQ9Y5P4 624 aa22.46■■□□□ 1.19
SSBP3-216ENST00000610401 CYP4A11Q02928 519 aa22.45■■□□□ 1.18
SSBP3-216ENST00000610401 AK8Q96MA6 479 aa22.45■■□□□ 1.18
SSBP3-216ENST00000610401 CELF4Q9BZC1 486 aaKnown RBP22.45■■□□□ 1.18
SSBP3-216ENST00000610401 EFCC1Q9HA90 598 aa22.45■■□□□ 1.18
SSBP3-216ENST00000610401 NR1D1P20393 614 aa22.45■■□□□ 1.18
SSBP3-216ENST00000610401 DPP8Q6V1X1 898 aaPredicted RBP22.45■■□□□ 1.18
SSBP3-216ENST00000610401 MSL3Q8N5Y2 521 aaKnown RBP22.45■■□□□ 1.18
SSBP3-216ENST00000610401 RAD54LQ92698 747 aa22.45■■□□□ 1.18
SSBP3-216ENST00000610401 CLIC2O15247 247 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 NOL4O94818 638 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 LSP1P33241 339 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 FLT3P36888 993 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 ADCY7P51828 1080 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 ADAM9Q13443 819 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 CHORDC1Q9UHD1 332 aaPredicted RBP22.44■■□□□ 1.18
SSBP3-216ENST00000610401 CACNA1SQ13698 1873 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 DISP2A7MBM2 1401 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 LOC102724159A0A0B4J2E5 919 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 PWP2Q15269 919 aaKnown RBP22.44■■□□□ 1.18
SSBP3-216ENST00000610401 MXD3Q9BW11 206 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 DDX25Q9UHL0 483 aaKnown RBP22.44■■□□□ 1.18
SSBP3-216ENST00000610401 ITGA4P13612 1032 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 ABCB4P21439 1286 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 SHROOM1Q2M3G4 852 aaPredicted RBP22.44■■□□□ 1.18
SSBP3-216ENST00000610401 GPBP1Q86WP2 473 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 PCDHA12Q9UN75 941 aa22.44■■□□□ 1.18
SSBP3-216ENST00000610401 POTEFA5A3E0 1075 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 POTEIP0CG38 1075 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 HNRNPH1P31943 449 aaKnown RBP22.43■■□□□ 1.18
SSBP3-216ENST00000610401 PRPHP41219 470 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 CASP5P51878 434 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 EMBQ6PCB8 327 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 POTEGQ6S5H5 508 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 POTEEQ6S8J3 1075 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 LRRC4CQ9HCJ2 640 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 AMACRQ9UHK6 382 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 A0A1W2PQJ5 194 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 PTK2Q05397 1052 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 PABPC4Q13310 644 aaKnown RBP eCLIP22.43■■□□□ 1.182e-66■■■■■ 36.3
SSBP3-216ENST00000610401 GOPCQ9HD26 462 aa22.43■■□□□ 1.18
SSBP3-216ENST00000610401 LAD1O00515 517 aa22.42■■□□□ 1.18
SSBP3-216ENST00000610401 MYL1P05976 194 aa22.42■■□□□ 1.18
SSBP3-216ENST00000610401 FKBP3Q00688 224 aaKnown RBP22.42■■□□□ 1.18
SSBP3-216ENST00000610401 RTCBQ9Y3I0 505 aaKnown RBP22.42■■□□□ 1.18
SSBP3-216ENST00000610401 BCORQ6W2J9 1755 aa22.42■■□□□ 1.18
SSBP3-216ENST00000610401 SHOX2O60902 331 aaPredicted RBP22.42■■□□□ 1.18
SSBP3-216ENST00000610401 PAK2Q13177 524 aa22.42■■□□□ 1.18
SSBP3-216ENST00000610401 GUF1Q8N442 669 aaKnown RBP22.42■■□□□ 1.18
SSBP3-216ENST00000610401 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.42■■□□□ 1.18
SSBP3-216ENST00000610401 DCDC2CA8MYV0 355 aa22.42■■□□□ 1.18
SSBP3-216ENST00000610401 UFL1O94874 794 aa22.42■■□□□ 1.18
SSBP3-216ENST00000610401 IRX3P78415 501 aaPredicted RBP22.42■■□□□ 1.18
SSBP3-216ENST00000610401 ASIC2Q16515 512 aa22.42■■□□□ 1.18
SSBP3-216ENST00000610401 MFSD14BQ5SR56 506 aa22.42■■□□□ 1.18
SSBP3-216ENST00000610401 CUEDC2Q9H467 287 aa22.42■■□□□ 1.18
SSBP3-216ENST00000610401 TLDC2A0PJX2 215 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 GRID2IPA4D2P6 1211 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 TPTE2Q6XPS3 522 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 KSR1Q8IVT5 923 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 JPH2Q9BR39 696 aaPredicted RBP22.41■■□□□ 1.18
SSBP3-216ENST00000610401 PCDHB13Q9Y5F0 798 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 GOLGA6L10A6NI86 522 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 AKR1B1P15121 316 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 NR2F2P24468 414 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 CTNNA1P35221 906 aaKnown RBP22.41■■□□□ 1.18
SSBP3-216ENST00000610401 KCNH2Q12809 1159 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 RPS6KA1Q15418 735 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 CD248Q9HCU0 757 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 BMP2KQ9NSY1 1161 aaPredicted RBP22.41■■□□□ 1.18
SSBP3-216ENST00000610401 ITGB4P16144 1822 aa22.41■■□□□ 1.18
SSBP3-216ENST00000610401 USP17L10C9JJH3 530 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 EDIL3O43854 480 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 SCNN1DP51172 638 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 ERVK-9P63128 1117 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 SH3GL2Q99962 352 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 NEUROG2Q9H2A3 272 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 SHANK3Q9BYB0 1731 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 C6orf229H3BNL8 230 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 FGFR1OPO95684 399 aaKnown RBP22.4■■□□□ 1.18
SSBP3-216ENST00000610401 PSMC6P62333 389 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 KCNA1Q09470 495 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 NBPF9Q3BBW0 867 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 ATP6V0A2Q9Y487 856 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 PAPPAQ13219 1627 aa22.4■■□□□ 1.18
SSBP3-216ENST00000610401 MYH14Q7Z406 1995 aaKnown RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms