RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 MLXIPQ9HAP2 919 aa17.04■□□□□ 0.32
CSNK2A1-209ENST00000609606 AGO4Q9HCK5 861 aaKnown RBP17.04■□□□□ 0.32
CSNK2A1-209ENST00000609606 POLR3EQ9NVU0 708 aa17.04■□□□□ 0.32
CSNK2A1-209ENST00000609606 SCN10AQ9Y5Y9 1956 aa17.04■□□□□ 0.32
CSNK2A1-209ENST00000609606 NFASCO94856 1347 aa17.03■□□□□ 0.32
CSNK2A1-209ENST00000609606 ATP9AO75110 1047 aa17.03■□□□□ 0.32
CSNK2A1-209ENST00000609606 ARP10275 920 aa17.03■□□□□ 0.32
CSNK2A1-209ENST00000609606 GCFC2P16383 781 aaKnown RBP17.03■□□□□ 0.32
CSNK2A1-209ENST00000609606 Q4G0T1 1027 aa17.03■□□□□ 0.32
CSNK2A1-209ENST00000609606 PRR16Q569H4 304 aa17.03■□□□□ 0.32
CSNK2A1-209ENST00000609606 EARS2Q5JPH6 523 aaKnown RBP17.03■□□□□ 0.32
CSNK2A1-209ENST00000609606 LENG9Q96B70 501 aa17.03■□□□□ 0.32
CSNK2A1-209ENST00000609606 SENP6Q9GZR1 1112 aaPredicted RBP17.03■□□□□ 0.32
CSNK2A1-209ENST00000609606 ALPK3Q96L96 1907 aa17.03■□□□□ 0.32
CSNK2A1-209ENST00000609606 ELP1O95163 1332 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 A0A1W2PQ45 241 aaPredicted RBP17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 A0A1W2PQY0 241 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 PPFIA4O75335 1185 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 MMP3P08254 477 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 PDCP20941 246 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 U2AF2P26368 475 aaKnown RBP eCLIP17.02■□□□□ 0.322e-6■□□□□ 10.1
CSNK2A1-209ENST00000609606 PURAQ00577 322 aaKnown RBP17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 DGKDQ16760 1214 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 PPP4R3AQ6IN85 833 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 CYFIP1Q7L576 1253 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 GLT1D1Q96MS3 346 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 HTATIP2Q9BUP3 242 aa17.02■□□□□ 0.32
CSNK2A1-209ENST00000609606 PDE4DIPQ5VU43 2346 aa17.02■□□□□ 0.31
CSNK2A1-209ENST00000609606 IPO5O00410 1097 aaKnown RBP17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 SNX17Q15036 470 aa17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 HSDL1Q3SXM5 330 aa17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 C1orf53Q5VUE5 145 aa17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 LARP1BQ659C4 914 aaKnown RBP17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 CXCL17Q6UXB2 119 aa17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 NOSTRINQ8IVI9 506 aa17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 SDF4Q9BRK5 362 aa17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 MTG1Q9BT17 334 aaPredicted RBP17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 SEZ6LQ9BYH1 1024 aa17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 BCAS3Q9H6U6 928 aa17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 JPH1Q9HDC5 661 aaPredicted RBP17.01■□□□□ 0.31
CSNK2A1-209ENST00000609606 FAM205CA6NFA0 338 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 H3BQV1 296 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 NOP56O00567 594 aaKnown RBP17■□□□□ 0.31
CSNK2A1-209ENST00000609606 TDP2O95551 362 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 ITGB3BPQ13352 177 aaPredicted RBP17■□□□□ 0.31
CSNK2A1-209ENST00000609606 GNL2Q13823 731 aaKnown RBP17■□□□□ 0.31
CSNK2A1-209ENST00000609606 LETM2Q2VYF4 491 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 FERMT2Q96AC1 680 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 GPR20Q99678 358 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 ZNF577Q9BSK1 485 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 STARD7Q9NQZ5 370 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 TBC1D22BQ9NU19 505 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 SLC9A2Q9UBY0 812 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 DDX25Q9UHL0 483 aaKnown RBP17■□□□□ 0.31
CSNK2A1-209ENST00000609606 WDR81Q562E7 1941 aa17■□□□□ 0.31
CSNK2A1-209ENST00000609606 MSH4O15457 936 aa16.99■□□□□ 0.31
CSNK2A1-209ENST00000609606 DHX15O43143 795 aaKnown RBP16.99■□□□□ 0.31
CSNK2A1-209ENST00000609606 MYL3P08590 195 aa16.99■□□□□ 0.31
CSNK2A1-209ENST00000609606 TRAPPC10P48553 1259 aa16.99■□□□□ 0.31
CSNK2A1-209ENST00000609606 SLC39A5Q6ZMH5 540 aa16.99■□□□□ 0.31
CSNK2A1-209ENST00000609606 SLC5A5Q92911 643 aa16.99■□□□□ 0.31
CSNK2A1-209ENST00000609606 RIT2Q99578 217 aa16.99■□□□□ 0.31
CSNK2A1-209ENST00000609606 PKD2L1Q9P0L9 805 aa16.99■□□□□ 0.31
CSNK2A1-209ENST00000609606 TNRC18O15417 2968 aaPredicted RBP16.99■□□□□ 0.31
CSNK2A1-209ENST00000609606 A0A0U1RQG5 324 aaPredicted RBP16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 KIF28PB7ZC32 967 aa16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 TBX3O15119 743 aa16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 SORBS3O60504 671 aa16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 CCNT1O60563 726 aaKnown RBP16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 F2P00734 622 aa16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 MLLT1Q03111 559 aaPredicted RBP16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 ORC2Q13416 577 aaPredicted RBP16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 SLC43A3Q8NBI5 491 aa16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 ETNPPLQ8TBG4 499 aa16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 SEPT1Q8WYJ6 367 aa16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 FAM20AQ96MK3 541 aa16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 KCNMB3Q9NPA1 279 aa16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 MYH9P35579 1960 aaKnown RBP16.98■□□□□ 0.31
CSNK2A1-209ENST00000609606 SLC37A4O43826 429 aa16.97■□□□□ 0.31
CSNK2A1-209ENST00000609606 HSP90AA1P07900 732 aaKnown RBP16.97■□□□□ 0.31
CSNK2A1-209ENST00000609606 LRRC26Q2I0M4 334 aa16.97■□□□□ 0.31
CSNK2A1-209ENST00000609606 ZNF746Q6NUN9 644 aaPredicted RBP16.97■□□□□ 0.31
CSNK2A1-209ENST00000609606 KAT2BQ92831 832 aa16.97■□□□□ 0.31
CSNK2A1-209ENST00000609606 VTI1AQ96AJ9 217 aa16.97■□□□□ 0.31
CSNK2A1-209ENST00000609606 KATNAL1Q9BW62 490 aa16.97■□□□□ 0.31
CSNK2A1-209ENST00000609606 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
CSNK2A1-209ENST00000609606 GRIN2DO15399 1336 aa16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 MROH7Q68CQ1 1323 aa16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 KAT6AQ92794 2004 aa16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 GSTTP1A0A1W2PQM5 241 aa16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 ARVCFO00192 962 aa16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 ATG7O95352 703 aa16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 LGALS2P05162 132 aa16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 PDIA4P13667 645 aaKnown RBP16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 SYT1P21579 422 aa16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 TCF7P36402 384 aaPredicted RBP16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 CDK7P50613 346 aa16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 ATN1P54259 1190 aaPredicted RBP16.96■□□□□ 0.31
CSNK2A1-209ENST00000609606 ACTR2P61160 394 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms