RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 SP7Q8TDD2 431 aaPredicted RBP18.32■□□□□ 0.52
HDDC2-210ENST00000609574 WNT8BQ93098 351 aa18.32■□□□□ 0.52
HDDC2-210ENST00000609574 TOP1MTQ969P6 601 aa18.32■□□□□ 0.52
HDDC2-210ENST00000609574 C16orf70Q9BSU1 422 aa18.32■□□□□ 0.52
HDDC2-210ENST00000609574 IFIH1Q9BYX4 1025 aaKnown RBP18.32■□□□□ 0.52
HDDC2-210ENST00000609574 C11orf16Q9NQ32 467 aa18.32■□□□□ 0.52
HDDC2-210ENST00000609574 ZNF215Q9UL58 517 aaPredicted RBP18.32■□□□□ 0.52
HDDC2-210ENST00000609574 ERICH2A1L162 156 aa18.31■□□□□ 0.52
HDDC2-210ENST00000609574 H3BQ06 376 aaPredicted RBP18.31■□□□□ 0.52
HDDC2-210ENST00000609574 STAM2O75886 525 aa18.31■□□□□ 0.52
HDDC2-210ENST00000609574 UBA1P22314 1058 aaKnown RBP18.31■□□□□ 0.52
HDDC2-210ENST00000609574 RRP1P56182 461 aaKnown RBP18.31■□□□□ 0.52
HDDC2-210ENST00000609574 GHRHRQ02643 423 aa18.31■□□□□ 0.52
HDDC2-210ENST00000609574 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
HDDC2-210ENST00000609574 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
HDDC2-210ENST00000609574 NEK9Q8TD19 979 aa18.31■□□□□ 0.52
HDDC2-210ENST00000609574 PABPC5Q96DU9 382 aaKnown RBP18.31■□□□□ 0.52
HDDC2-210ENST00000609574 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
HDDC2-210ENST00000609574 RNPEPQ9H4A4 650 aa18.31■□□□□ 0.52
HDDC2-210ENST00000609574 NSUN3Q9H649 340 aaKnown RBP18.31■□□□□ 0.52
HDDC2-210ENST00000609574 PRKAG3Q9UGI9 489 aa18.31■□□□□ 0.52
HDDC2-210ENST00000609574 RWDD3Q9Y3V2 267 aa18.31■□□□□ 0.52
HDDC2-210ENST00000609574 TREHO43280 583 aa18.3■□□□□ 0.52
HDDC2-210ENST00000609574 DCXO43602 365 aa18.3■□□□□ 0.52
HDDC2-210ENST00000609574 LGALS2P05162 132 aa18.3■□□□□ 0.52
HDDC2-210ENST00000609574 CTSHP09668 335 aa18.3■□□□□ 0.52
HDDC2-210ENST00000609574 AAMPQ13685 434 aa18.3■□□□□ 0.52
HDDC2-210ENST00000609574 STAG2Q8N3U4 1231 aa18.3■□□□□ 0.52
HDDC2-210ENST00000609574 FIBCD1Q8N539 461 aa18.3■□□□□ 0.52
HDDC2-210ENST00000609574 RGS20O76081 388 aa18.29■□□□□ 0.52
HDDC2-210ENST00000609574 RB1P06400 928 aa18.29■□□□□ 0.52
HDDC2-210ENST00000609574 SP2Q02086 613 aa18.29■□□□□ 0.52
HDDC2-210ENST00000609574 TCEAL5Q5H9L2 206 aa18.29■□□□□ 0.52
HDDC2-210ENST00000609574 RSPH3Q86UC2 560 aa18.29■□□□□ 0.52
HDDC2-210ENST00000609574 ALYREFQ86V81 257 aaKnown RBP18.29■□□□□ 0.52
HDDC2-210ENST00000609574 CLDND1Q9NY35 253 aa18.29■□□□□ 0.52
HDDC2-210ENST00000609574 OPLAHO14841 1288 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 CTNNB1P35222 781 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 ARHGAP4P98171 946 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 HIC1Q14526 733 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 METTL7BQ6UX53 244 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 CYFIP1Q7L576 1253 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 GIMAP8Q8ND71 665 aaPredicted RBP18.28■□□□□ 0.52
HDDC2-210ENST00000609574 CUL5Q93034 780 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 MTMR8Q96EF0 704 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 POP1Q99575 1024 aaKnown RBP18.28■□□□□ 0.52
HDDC2-210ENST00000609574 C11orf84Q9BUA3 381 aaPredicted RBP18.28■□□□□ 0.52
HDDC2-210ENST00000609574 LMAN2LQ9H0V9 348 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 SETD4Q9NVD3 440 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 MAD2L2Q9UI95 211 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 PIEZO1Q92508 2521 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 BRWD1Q9NSI6 2320 aa18.28■□□□□ 0.52
HDDC2-210ENST00000609574 PNMA6FA0A0J9YX94 578 aa18.27■□□□□ 0.52
HDDC2-210ENST00000609574 PALM3A6NDB9 673 aaPredicted RBP18.27■□□□□ 0.52
HDDC2-210ENST00000609574 FIBPO43427 364 aa18.27■□□□□ 0.52
HDDC2-210ENST00000609574 SART3Q15020 963 aaKnown RBP18.27■□□□□ 0.52
HDDC2-210ENST00000609574 UTP14CQ5TAP6 766 aaKnown RBP18.27■□□□□ 0.52
HDDC2-210ENST00000609574 PPP2R3CQ969Q6 453 aa18.27■□□□□ 0.52
HDDC2-210ENST00000609574 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
HDDC2-210ENST00000609574 PIGSQ96S52 555 aa18.27■□□□□ 0.52
HDDC2-210ENST00000609574 KCNH6Q9H252 994 aa18.27■□□□□ 0.52
HDDC2-210ENST00000609574 SPATA31C2B4DYI2 1134 aa18.26■□□□□ 0.51
HDDC2-210ENST00000609574 PPP1R11O60927 126 aaPredicted RBP18.26■□□□□ 0.51
HDDC2-210ENST00000609574 ICAM3P32942 547 aa18.26■□□□□ 0.51
HDDC2-210ENST00000609574 MKRN4PQ13434 485 aaPredicted RBP18.26■□□□□ 0.51
HDDC2-210ENST00000609574 NLRX1Q86UT6 975 aa18.26■□□□□ 0.51
HDDC2-210ENST00000609574 PLEKHM2Q8IWE5 1019 aa18.26■□□□□ 0.51
HDDC2-210ENST00000609574 IL31RAQ8NI17 732 aa18.26■□□□□ 0.51
HDDC2-210ENST00000609574 OSBPL3Q9H4L5 887 aa18.26■□□□□ 0.51
HDDC2-210ENST00000609574 RTEL1Q9NZ71 1219 aa18.26■□□□□ 0.51
HDDC2-210ENST00000609574 MUC6Q6W4X9 2439 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 NRCAMQ92823 1304 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 COL4A4P53420 1690 aaPredicted RBP18.25■□□□□ 0.51
HDDC2-210ENST00000609574 IFIT3O14879 490 aaKnown RBP18.25■□□□□ 0.51
HDDC2-210ENST00000609574 HOXC8P31273 242 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 BMPR1AP36894 532 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 FAM26DQ5JW98 314 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 TAF2Q6P1X5 1199 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 XRRA1Q6P2D8 792 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 ADHFE1Q8IWW8 467 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 SMARCC2Q8TAQ2 1214 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 GPKOWQ92917 476 aaPredicted RBP eCLIP18.25■□□□□ 0.51
HDDC2-210ENST00000609574 MFSD14AQ96MC6 490 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 GPR20Q99678 358 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 RIOX1Q9H6W3 641 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
HDDC2-210ENST00000609574 KIAA1217Q5T5P2 1943 aa18.25■□□□□ 0.51
HDDC2-210ENST00000609574 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.24■□□□□ 0.51
HDDC2-210ENST00000609574 SP4Q02446 784 aa18.24■□□□□ 0.51
HDDC2-210ENST00000609574 GRM4Q14833 912 aa18.24■□□□□ 0.51
HDDC2-210ENST00000609574 SEC23AQ15436 765 aa18.24■□□□□ 0.51
HDDC2-210ENST00000609574 CATIPQ7Z7H3 387 aa18.24■□□□□ 0.51
HDDC2-210ENST00000609574 RALYLQ86SE5 291 aaKnown RBP18.24■□□□□ 0.51
HDDC2-210ENST00000609574 RPAINQ86UA6 219 aa18.24■□□□□ 0.51
HDDC2-210ENST00000609574 INPP4AQ96PE3 977 aaPredicted RBP18.24■□□□□ 0.51
HDDC2-210ENST00000609574 SENP7Q9BQF6 1050 aa18.24■□□□□ 0.51
HDDC2-210ENST00000609574 POTEB3A0JP26 581 aa18.23■□□□□ 0.51
HDDC2-210ENST00000609574 RPLP2P05387 115 aaKnown RBP18.23■□□□□ 0.51
HDDC2-210ENST00000609574 ZP2Q05996 745 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms