RNA–Protein interactions for RNA: ENST00000608284.1

HDDC2-203, Transcript of HD domain containing 2, humanhuman

TSL 3 BASIC

Gene HDDC2, Length 538 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-203ENST00000608284 SP7Q8TDD2 431 aaPredicted RBP18.32■□□□□ 0.52
HDDC2-203ENST00000608284 WNT8BQ93098 351 aa18.32■□□□□ 0.52
HDDC2-203ENST00000608284 TOP1MTQ969P6 601 aa18.32■□□□□ 0.52
HDDC2-203ENST00000608284 C16orf70Q9BSU1 422 aa18.32■□□□□ 0.52
HDDC2-203ENST00000608284 IFIH1Q9BYX4 1025 aaKnown RBP18.32■□□□□ 0.52
HDDC2-203ENST00000608284 C11orf16Q9NQ32 467 aa18.32■□□□□ 0.52
HDDC2-203ENST00000608284 ZNF215Q9UL58 517 aaPredicted RBP18.32■□□□□ 0.52
HDDC2-203ENST00000608284 ERICH2A1L162 156 aa18.31■□□□□ 0.52
HDDC2-203ENST00000608284 H3BQ06 376 aaPredicted RBP18.31■□□□□ 0.52
HDDC2-203ENST00000608284 STAM2O75886 525 aa18.31■□□□□ 0.52
HDDC2-203ENST00000608284 UBA1P22314 1058 aaKnown RBP18.31■□□□□ 0.52
HDDC2-203ENST00000608284 RRP1P56182 461 aaKnown RBP18.31■□□□□ 0.52
HDDC2-203ENST00000608284 GHRHRQ02643 423 aa18.31■□□□□ 0.52
HDDC2-203ENST00000608284 B4GALNT3Q6L9W6 998 aa18.31■□□□□ 0.52
HDDC2-203ENST00000608284 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
HDDC2-203ENST00000608284 NEK9Q8TD19 979 aa18.31■□□□□ 0.52
HDDC2-203ENST00000608284 PABPC5Q96DU9 382 aaKnown RBP18.31■□□□□ 0.52
HDDC2-203ENST00000608284 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
HDDC2-203ENST00000608284 RNPEPQ9H4A4 650 aa18.31■□□□□ 0.52
HDDC2-203ENST00000608284 NSUN3Q9H649 340 aaKnown RBP18.31■□□□□ 0.52
HDDC2-203ENST00000608284 PRKAG3Q9UGI9 489 aa18.31■□□□□ 0.52
HDDC2-203ENST00000608284 RWDD3Q9Y3V2 267 aa18.31■□□□□ 0.52
HDDC2-203ENST00000608284 TREHO43280 583 aa18.3■□□□□ 0.52
HDDC2-203ENST00000608284 DCXO43602 365 aa18.3■□□□□ 0.52
HDDC2-203ENST00000608284 LGALS2P05162 132 aa18.3■□□□□ 0.52
HDDC2-203ENST00000608284 CTSHP09668 335 aa18.3■□□□□ 0.52
HDDC2-203ENST00000608284 AAMPQ13685 434 aa18.3■□□□□ 0.52
HDDC2-203ENST00000608284 STAG2Q8N3U4 1231 aa18.3■□□□□ 0.52
HDDC2-203ENST00000608284 FIBCD1Q8N539 461 aa18.3■□□□□ 0.52
HDDC2-203ENST00000608284 RGS20O76081 388 aa18.29■□□□□ 0.52
HDDC2-203ENST00000608284 RB1P06400 928 aa18.29■□□□□ 0.52
HDDC2-203ENST00000608284 SP2Q02086 613 aa18.29■□□□□ 0.52
HDDC2-203ENST00000608284 TCEAL5Q5H9L2 206 aa18.29■□□□□ 0.52
HDDC2-203ENST00000608284 RSPH3Q86UC2 560 aa18.29■□□□□ 0.52
HDDC2-203ENST00000608284 ALYREFQ86V81 257 aaKnown RBP18.29■□□□□ 0.52
HDDC2-203ENST00000608284 CLDND1Q9NY35 253 aa18.29■□□□□ 0.52
HDDC2-203ENST00000608284 OPLAHO14841 1288 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 CTNNB1P35222 781 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 ARHGAP4P98171 946 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 HIC1Q14526 733 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 METTL7BQ6UX53 244 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 CYFIP1Q7L576 1253 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 GIMAP8Q8ND71 665 aaPredicted RBP18.28■□□□□ 0.52
HDDC2-203ENST00000608284 CUL5Q93034 780 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 MTMR8Q96EF0 704 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 POP1Q99575 1024 aaKnown RBP18.28■□□□□ 0.52
HDDC2-203ENST00000608284 C11orf84Q9BUA3 381 aaPredicted RBP18.28■□□□□ 0.52
HDDC2-203ENST00000608284 LMAN2LQ9H0V9 348 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 SETD4Q9NVD3 440 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 MAD2L2Q9UI95 211 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 PIEZO1Q92508 2521 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 BRWD1Q9NSI6 2320 aa18.28■□□□□ 0.52
HDDC2-203ENST00000608284 PNMA6FA0A0J9YX94 578 aa18.27■□□□□ 0.52
HDDC2-203ENST00000608284 PALM3A6NDB9 673 aaPredicted RBP18.27■□□□□ 0.52
HDDC2-203ENST00000608284 FIBPO43427 364 aa18.27■□□□□ 0.52
HDDC2-203ENST00000608284 SART3Q15020 963 aaKnown RBP18.27■□□□□ 0.52
HDDC2-203ENST00000608284 UTP14CQ5TAP6 766 aaKnown RBP18.27■□□□□ 0.52
HDDC2-203ENST00000608284 PPP2R3CQ969Q6 453 aa18.27■□□□□ 0.52
HDDC2-203ENST00000608284 ZFP91Q96JP5 570 aaPredicted RBP18.27■□□□□ 0.52
HDDC2-203ENST00000608284 PIGSQ96S52 555 aa18.27■□□□□ 0.52
HDDC2-203ENST00000608284 KCNH6Q9H252 994 aa18.27■□□□□ 0.52
HDDC2-203ENST00000608284 SPATA31C2B4DYI2 1134 aa18.26■□□□□ 0.51
HDDC2-203ENST00000608284 PPP1R11O60927 126 aaPredicted RBP18.26■□□□□ 0.51
HDDC2-203ENST00000608284 ICAM3P32942 547 aa18.26■□□□□ 0.51
HDDC2-203ENST00000608284 MKRN4PQ13434 485 aaPredicted RBP18.26■□□□□ 0.51
HDDC2-203ENST00000608284 NLRX1Q86UT6 975 aa18.26■□□□□ 0.51
HDDC2-203ENST00000608284 PLEKHM2Q8IWE5 1019 aa18.26■□□□□ 0.51
HDDC2-203ENST00000608284 IL31RAQ8NI17 732 aa18.26■□□□□ 0.51
HDDC2-203ENST00000608284 OSBPL3Q9H4L5 887 aa18.26■□□□□ 0.51
HDDC2-203ENST00000608284 RTEL1Q9NZ71 1219 aa18.26■□□□□ 0.51
HDDC2-203ENST00000608284 MUC6Q6W4X9 2439 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 NRCAMQ92823 1304 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 COL4A4P53420 1690 aaPredicted RBP18.25■□□□□ 0.51
HDDC2-203ENST00000608284 IFIT3O14879 490 aaKnown RBP18.25■□□□□ 0.51
HDDC2-203ENST00000608284 HOXC8P31273 242 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 BMPR1AP36894 532 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 FAM26DQ5JW98 314 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 TAF2Q6P1X5 1199 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 XRRA1Q6P2D8 792 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 ADHFE1Q8IWW8 467 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 SMARCC2Q8TAQ2 1214 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 GPKOWQ92917 476 aaPredicted RBP eCLIP18.25■□□□□ 0.51
HDDC2-203ENST00000608284 MFSD14AQ96MC6 490 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 GPR20Q99678 358 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 RIOX1Q9H6W3 641 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 U3KPZ7 1027 aaPredicted RBP18.25■□□□□ 0.51
HDDC2-203ENST00000608284 KIAA1217Q5T5P2 1943 aa18.25■□□□□ 0.51
HDDC2-203ENST00000608284 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.24■□□□□ 0.51
HDDC2-203ENST00000608284 SP4Q02446 784 aa18.24■□□□□ 0.51
HDDC2-203ENST00000608284 GRM4Q14833 912 aa18.24■□□□□ 0.51
HDDC2-203ENST00000608284 SEC23AQ15436 765 aa18.24■□□□□ 0.51
HDDC2-203ENST00000608284 CATIPQ7Z7H3 387 aa18.24■□□□□ 0.51
HDDC2-203ENST00000608284 RALYLQ86SE5 291 aaKnown RBP18.24■□□□□ 0.51
HDDC2-203ENST00000608284 RPAINQ86UA6 219 aa18.24■□□□□ 0.51
HDDC2-203ENST00000608284 INPP4AQ96PE3 977 aaPredicted RBP18.24■□□□□ 0.51
HDDC2-203ENST00000608284 SENP7Q9BQF6 1050 aa18.24■□□□□ 0.51
HDDC2-203ENST00000608284 POTEB3A0JP26 581 aa18.23■□□□□ 0.51
HDDC2-203ENST00000608284 RPLP2P05387 115 aaKnown RBP18.23■□□□□ 0.51
HDDC2-203ENST00000608284 ZP2Q05996 745 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms