RNA–Protein interactions for RNA: ENST00000607841.5

CTSA-219, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-219ENST00000607841 CYFIP1Q7L576 1253 aa16.19■□□□□ 0.18
CTSA-219ENST00000607841 STARD7Q9NQZ5 370 aa16.19■□□□□ 0.18
CTSA-219ENST00000607841 ELP1O95163 1332 aa16.19■□□□□ 0.18
CTSA-219ENST00000607841 A0A1W2PQ45 241 aaPredicted RBP16.18■□□□□ 0.18
CTSA-219ENST00000607841 A0A1W2PQY0 241 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 MMP3P08254 477 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 MYL3P08590 195 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
CTSA-219ENST00000607841 Q4G0T1 1027 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 PPP4R3AQ6IN85 833 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 FERMT2Q96AC1 680 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 VTI1AQ96AJ9 217 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 ZNF577Q9BSK1 485 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 MTG1Q9BT17 334 aaPredicted RBP16.18■□□□□ 0.18
CTSA-219ENST00000607841 TBC1D22BQ9NU19 505 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 PKD2L1Q9P0L9 805 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 TCEAL9Q9UHQ7 104 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 KIAA0100Q14667 2235 aaKnown RBP16.18■□□□□ 0.18
CTSA-219ENST00000607841 NFASCO94856 1347 aa16.18■□□□□ 0.18
CTSA-219ENST00000607841 IPO5O00410 1097 aaKnown RBP16.17■□□□□ 0.18
CTSA-219ENST00000607841 SORBS3O60504 671 aa16.17■□□□□ 0.18
CTSA-219ENST00000607841 CCNT1O60563 726 aaKnown RBP16.17■□□□□ 0.18
CTSA-219ENST00000607841 HSDL1Q3SXM5 330 aa16.17■□□□□ 0.18
CTSA-219ENST00000607841 EARS2Q5JPH6 523 aaKnown RBP16.17■□□□□ 0.18
CTSA-219ENST00000607841 CXCL17Q6UXB2 119 aa16.17■□□□□ 0.18
CTSA-219ENST00000607841 NOSTRINQ8IVI9 506 aa16.17■□□□□ 0.18
CTSA-219ENST00000607841 MBOAT7Q96N66 472 aa16.17■□□□□ 0.18
CTSA-219ENST00000607841 SEZ6LQ9BYH1 1024 aa16.17■□□□□ 0.18
CTSA-219ENST00000607841 JPH1Q9HDC5 661 aaPredicted RBP16.17■□□□□ 0.18
CTSA-219ENST00000607841 DDX25Q9UHL0 483 aaKnown RBP16.17■□□□□ 0.18
CTSA-219ENST00000607841 EDIL3O43854 480 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 TDP2O95551 362 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 U2AF2P26368 475 aaKnown RBP eCLIP16.16■□□□□ 0.18
CTSA-219ENST00000607841 PURAQ00577 322 aaKnown RBP16.16■□□□□ 0.18
CTSA-219ENST00000607841 BECN1Q14457 450 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 MCTP1Q6DN14 999 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 SLC39A5Q6ZMH5 540 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 SEPT1Q8WYJ6 367 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 LENG9Q96B70 501 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 GPR20Q99678 358 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 KATNAL1Q9BW62 490 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 SLC9A2Q9UBY0 812 aa16.16■□□□□ 0.18
CTSA-219ENST00000607841 NOL7Q9UMY1 257 aaKnown RBP16.16■□□□□ 0.18
CTSA-219ENST00000607841 A0A0U1RQG5 324 aaPredicted RBP16.15■□□□□ 0.18
CTSA-219ENST00000607841 MSH4O15457 936 aa16.15■□□□□ 0.18
CTSA-219ENST00000607841 MARCH6O60337 910 aa16.15■□□□□ 0.18
CTSA-219ENST00000607841 HOXD8P13378 290 aaPredicted RBP16.15■□□□□ 0.18
CTSA-219ENST00000607841 PDIA4P13667 645 aaKnown RBP16.15■□□□□ 0.18
CTSA-219ENST00000607841 TRAPPC10P48553 1259 aa16.15■□□□□ 0.18
CTSA-219ENST00000607841 ATN1P54259 1190 aaPredicted RBP16.15■□□□□ 0.18
CTSA-219ENST00000607841 SP4Q02446 784 aa16.15■□□□□ 0.18
CTSA-219ENST00000607841 ITGB3BPQ13352 177 aaPredicted RBP16.15■□□□□ 0.18
CTSA-219ENST00000607841 C1orf53Q5VUE5 145 aa16.15■□□□□ 0.18
CTSA-219ENST00000607841 DPF3Q92784 378 aa16.15■□□□□ 0.18
CTSA-219ENST00000607841 RIT2Q99578 217 aa16.15■□□□□ 0.18
CTSA-219ENST00000607841 BCAS3Q9H6U6 928 aa16.15■□□□□ 0.18
CTSA-219ENST00000607841 FAM205CA6NFA0 338 aa16.14■□□□□ 0.17
CTSA-219ENST00000607841 TBX3O15119 743 aa16.14■□□□□ 0.17
CTSA-219ENST00000607841 FAM20AQ96MK3 541 aa16.14■□□□□ 0.17
CTSA-219ENST00000607841 MROH7Q68CQ1 1323 aa16.14■□□□□ 0.17
CTSA-219ENST00000607841 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
CTSA-219ENST00000607841 ARVCFO00192 962 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 DHX15O43143 795 aaKnown RBP16.13■□□□□ 0.17
CTSA-219ENST00000607841 EVI5O60447 810 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 GAS7O60861 476 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 BAG4O95429 457 aaKnown RBP16.13■□□□□ 0.17
CTSA-219ENST00000607841 ATP2B1P20020 1258 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 TCF7P36402 384 aaPredicted RBP16.13■□□□□ 0.17
CTSA-219ENST00000607841 KRT76Q01546 638 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 ORC2Q13416 577 aaPredicted RBP16.13■□□□□ 0.17
CTSA-219ENST00000607841 ITGA7Q13683 1181 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 SNX17Q15036 470 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 LRCH2Q5VUJ6 765 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 ZNF746Q6NUN9 644 aaPredicted RBP16.13■□□□□ 0.17
CTSA-219ENST00000607841 SMAP1Q8IYB5 467 aaPredicted RBP16.13■□□□□ 0.17
CTSA-219ENST00000607841 SLFN12Q8IYM2 578 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 SLC5A5Q92911 643 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 TEKT3Q9BXF9 490 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 ZNF215Q9UL58 517 aaPredicted RBP16.13■□□□□ 0.17
CTSA-219ENST00000607841 KIAA1217Q5T5P2 1943 aa16.13■□□□□ 0.17
CTSA-219ENST00000607841 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 KIF28PB7ZC32 967 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 DDX39AO00148 427 aaKnown RBP16.12■□□□□ 0.17
CTSA-219ENST00000607841 SLC37A4O43826 429 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 NEMFO60524 1076 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 F2P00734 622 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 LGALS2P05162 132 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 SYT1P21579 422 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 ACTR2P61160 394 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 LRRC26Q2I0M4 334 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 RILPL1Q5EBL4 403 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 NFRKBQ6P4R8 1299 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 ETNPPLQ8TBG4 499 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 AZI2Q9H6S1 392 aa16.12■□□□□ 0.17
CTSA-219ENST00000607841 GSTTP1A0A1W2PQM5 241 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 H3BRB1 525 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 ATG7O95352 703 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 ZNF286BP0CG31 522 aa16.11■□□□□ 0.17
CTSA-219ENST00000607841 PSEN2P49810 448 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms