RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 CCDC148Q8NFR7 591 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 GTF3C6Q969F1 213 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 CDHR1Q96JP9 859 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 GPR20Q99678 358 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 C16orf70Q9BSU1 422 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 KCNH7Q9NS40 1196 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 FAM86B1E9PN63 330 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 EDIL3O43854 480 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 CDKL5O76039 1030 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 CYP3A4P08684 503 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 FAM86B2P0C5J1 330 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 ARP10275 920 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 PSEN2P49810 448 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 EPHB4P54760 987 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 PTPN11Q06124 597 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 ST3GAL1Q11201 340 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 FAM47CQ5HY64 1035 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 MCTP2Q6DN12 878 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 SESTD1Q86VW0 696 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 TDHQ8IZJ6 230 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 GIMAP8Q8ND71 665 aaPredicted RBP14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 BICD2Q8TD16 824 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 UMODL1Q5DID0 1318 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 STK36Q9NRP7 1315 aa14.61□□□□□ -0.07
SHROOM1-207ENST00000606676 IGLV3-22A0A075B6J6 115 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 M0R2N6 131 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 FDPSP14324 419 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 FXR1P51114 621 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 NLRP5P59047 1200 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 CHMP4BP1P59074 171 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 MFSD10Q14728 455 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 KIAA0753Q2KHM9 967 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 MFSD5Q6N075 450 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 FAM177A1Q8N128 213 aaPredicted RBP14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 CTAGE1Q96RT6 745 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 NOC4LQ9BVI4 516 aaKnown RBP14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 PPP1R12CQ9BZL4 782 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 PKD2L1Q9P0L9 805 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 PCDHA4Q9UN74 947 aa14.6□□□□□ -0.07
SHROOM1-207ENST00000606676 NOP56O00567 594 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 LGALS2P05162 132 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 SUPT20HL2P0C7V6 817 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 CYP2C9P11712 490 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 CYP2C18P33260 490 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 SP4Q02446 784 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 ITGB3BPQ13352 177 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 HIC1Q14526 733 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 GDF6Q6KF10 455 aaPredicted RBP14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 NIPA1Q7RTP0 329 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 DAGLBQ8NCG7 672 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 NSUN7Q8NE18 718 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 ALG1Q9BT22 464 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 KATNAL1Q9BW62 490 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 HIPK3Q9H422 1215 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 AGO4Q9HCK5 861 aaKnown RBP14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 GJB4Q9NTQ9 266 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 HDAC6Q9UBN7 1215 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 KCNJ14Q9UNX9 436 aa14.59□□□□□ -0.07
SHROOM1-207ENST00000606676 GSTTP1A0A1W2PQM5 241 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 H3BRB1 525 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 SOX1O00570 391 aaPredicted RBP14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 ZNF76P36508 570 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 FPGSQ05932 587 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 SHHQ15465 462 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 C9orf50Q5SZB4 431 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 C16orf59Q7L2K0 433 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 BLIDQ8IZY5 108 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 C7orf31Q8N865 590 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 PHF20Q9BVI0 1012 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 WNT8AQ9H1J5 351 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 TUT1Q9H6E5 874 aaKnown RBP14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 ORC3Q9UBD5 711 aaPredicted RBP14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 GTF2IRD1Q9UHL9 959 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 LIMCH1Q9UPQ0 1083 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 GTF3C3Q9Y5Q9 886 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 MYH7BA7E2Y1 1941 aa14.58□□□□□ -0.08
SHROOM1-207ENST00000606676 DHX15O43143 795 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 JAK2O60674 1132 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 CSF2RAP15509 400 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 HOXC8P31273 242 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 CIITAP33076 1130 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 PTGISQ16647 500 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 LRIT3Q3SXY7 679 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 UTP14CQ5TAP6 766 aaKnown RBP14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 GALNT17Q6IS24 598 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 PLA2G4DQ86XP0 818 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 TRIM50Q86XT4 487 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 SEPT1Q8WYJ6 367 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 LENG9Q96B70 501 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 VWCEQ96DN2 955 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 JPH1Q9HDC5 661 aaPredicted RBP14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 NFASCO94856 1347 aa14.57□□□□□ -0.08
SHROOM1-207ENST00000606676 TCF7P36402 384 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-207ENST00000606676 USP11P51784 963 aa14.56□□□□□ -0.08
SHROOM1-207ENST00000606676 CCL23P55773 120 aa14.56□□□□□ -0.08
SHROOM1-207ENST00000606676 ZNF200P98182 395 aaPredicted RBP14.56□□□□□ -0.08
SHROOM1-207ENST00000606676 TMEM199Q8N511 208 aa14.56□□□□□ -0.08
SHROOM1-207ENST00000606676 TBCKQ8TEA7 893 aa14.56□□□□□ -0.08
SHROOM1-207ENST00000606676 DHX38Q92620 1227 aaKnown RBP14.56□□□□□ -0.08
SHROOM1-207ENST00000606676 UIMC1Q96RL1 719 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms