RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 MYSM1Q5VVJ2 828 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 CCSAPQ6IQ19 270 aaPredicted RBP16.21■□□□□ 0.19
CTSA-211ENST00000606066 MOXD1Q6UVY6 613 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 METTL7BQ6UX53 244 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 NEK8Q86SG6 692 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 PLA2G4DQ86XP0 818 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 PPTC7Q8NI37 304 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 CYP2W1Q8TAV3 490 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 GLT1D1Q96MS3 346 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 SENP6Q9GZR1 1112 aaPredicted RBP16.21■□□□□ 0.19
CTSA-211ENST00000606066 FOXP1Q9H334 677 aaPredicted RBP16.21■□□□□ 0.19
CTSA-211ENST00000606066 POLR3EQ9NVU0 708 aa16.21■□□□□ 0.19
CTSA-211ENST00000606066 LRRC37A2A6NM11 1700 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 LAMA2P24043 3122 aaKnown RBP16.2■□□□□ 0.18
CTSA-211ENST00000606066 FAM86B1E9PN63 330 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 NOP56O00567 594 aaKnown RBP16.2■□□□□ 0.18
CTSA-211ENST00000606066 CTAGE5O15320 804 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 ASGR1P07306 291 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 HSP90AA1P07900 732 aaKnown RBP16.2■□□□□ 0.18
CTSA-211ENST00000606066 FAM86B2P0C5J1 330 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 PDCP20941 246 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 PTGS1P23219 599 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 INF2Q27J81 1249 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 PRR16Q569H4 304 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 LARP1BQ659C4 914 aaKnown RBP16.2■□□□□ 0.18
CTSA-211ENST00000606066 AFG1LQ8WV93 481 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 TNFRSF25Q93038 417 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 SPATA33Q96N06 139 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 SDF4Q9BRK5 362 aa16.2■□□□□ 0.18
CTSA-211ENST00000606066 AGO4Q9HCK5 861 aaKnown RBP16.2■□□□□ 0.18
CTSA-211ENST00000606066 MCM3APO60318 1980 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 IGLV3-22A0A075B6J6 115 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 CYP3A7-CYP3A51PA0A087WV96 503 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 ATP9AO75110 1047 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 PPFIA4O75335 1185 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 ARP10275 920 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 GCFC2P16383 781 aaKnown RBP16.19■□□□□ 0.18
CTSA-211ENST00000606066 KCNA2P16389 499 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 CYP3A7P24462 503 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 DGKDQ16760 1214 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 LRRC26Q2I0M4 334 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 LETM2Q2VYF4 491 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 FAM109BQ6ICB4 259 aaPredicted RBP16.19■□□□□ 0.18
CTSA-211ENST00000606066 CYFIP1Q7L576 1253 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 STARD7Q9NQZ5 370 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 ELP1O95163 1332 aa16.19■□□□□ 0.18
CTSA-211ENST00000606066 A0A1W2PQ45 241 aaPredicted RBP16.18■□□□□ 0.18
CTSA-211ENST00000606066 A0A1W2PQY0 241 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 MMP3P08254 477 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 MYL3P08590 195 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 IRX5P78411 483 aaPredicted RBP16.18■□□□□ 0.18
CTSA-211ENST00000606066 Q4G0T1 1027 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 PPP4R3AQ6IN85 833 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 Q7L0L9 218 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 FERMT2Q96AC1 680 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 VTI1AQ96AJ9 217 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 ZNF577Q9BSK1 485 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 MTG1Q9BT17 334 aaPredicted RBP16.18■□□□□ 0.18
CTSA-211ENST00000606066 TBC1D22BQ9NU19 505 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 PKD2L1Q9P0L9 805 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 TCEAL9Q9UHQ7 104 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 NFASCO94856 1347 aa16.18■□□□□ 0.18
CTSA-211ENST00000606066 DNAH12Q6ZR08 3092 aa16.17■□□□□ 0.18
CTSA-211ENST00000606066 UNC80Q8N2C7 3258 aa16.17■□□□□ 0.18
CTSA-211ENST00000606066 IPO5O00410 1097 aaKnown RBP16.17■□□□□ 0.18
CTSA-211ENST00000606066 SORBS3O60504 671 aa16.17■□□□□ 0.18
CTSA-211ENST00000606066 CCNT1O60563 726 aaKnown RBP16.17■□□□□ 0.18
CTSA-211ENST00000606066 HSDL1Q3SXM5 330 aa16.17■□□□□ 0.18
CTSA-211ENST00000606066 EARS2Q5JPH6 523 aaKnown RBP16.17■□□□□ 0.18
CTSA-211ENST00000606066 CXCL17Q6UXB2 119 aa16.17■□□□□ 0.18
CTSA-211ENST00000606066 NOSTRINQ8IVI9 506 aa16.17■□□□□ 0.18
CTSA-211ENST00000606066 MBOAT7Q96N66 472 aa16.17■□□□□ 0.18
CTSA-211ENST00000606066 SEZ6LQ9BYH1 1024 aa16.17■□□□□ 0.18
CTSA-211ENST00000606066 JPH1Q9HDC5 661 aaPredicted RBP16.17■□□□□ 0.18
CTSA-211ENST00000606066 DDX25Q9UHL0 483 aaKnown RBP16.17■□□□□ 0.18
CTSA-211ENST00000606066 EDIL3O43854 480 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 TDP2O95551 362 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 U2AF2P26368 475 aaKnown RBP eCLIP16.16■□□□□ 0.18
CTSA-211ENST00000606066 PURAQ00577 322 aaKnown RBP16.16■□□□□ 0.18
CTSA-211ENST00000606066 BECN1Q14457 450 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 MCTP1Q6DN14 999 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 SLC39A5Q6ZMH5 540 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 SEPT1Q8WYJ6 367 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 LENG9Q96B70 501 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 GPR20Q99678 358 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 KATNAL1Q9BW62 490 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 SLC9A2Q9UBY0 812 aa16.16■□□□□ 0.18
CTSA-211ENST00000606066 NOL7Q9UMY1 257 aaKnown RBP16.16■□□□□ 0.18
CTSA-211ENST00000606066 A0A0U1RQG5 324 aaPredicted RBP16.15■□□□□ 0.18
CTSA-211ENST00000606066 MSH4O15457 936 aa16.15■□□□□ 0.18
CTSA-211ENST00000606066 MARCH6O60337 910 aa16.15■□□□□ 0.18
CTSA-211ENST00000606066 HOXD8P13378 290 aaPredicted RBP16.15■□□□□ 0.18
CTSA-211ENST00000606066 PDIA4P13667 645 aaKnown RBP16.15■□□□□ 0.18
CTSA-211ENST00000606066 TRAPPC10P48553 1259 aa16.15■□□□□ 0.18
CTSA-211ENST00000606066 ATN1P54259 1190 aaPredicted RBP16.15■□□□□ 0.18
CTSA-211ENST00000606066 SP4Q02446 784 aa16.15■□□□□ 0.18
CTSA-211ENST00000606066 ITGB3BPQ13352 177 aaPredicted RBP16.15■□□□□ 0.18
CTSA-211ENST00000606066 C1orf53Q5VUE5 145 aa16.15■□□□□ 0.18
CTSA-211ENST00000606066 RIT2Q99578 217 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 1357.3 ms