RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 IL23AQ9NPF7 189 aa27.12■■□□□ 1.93
SSX2IP-209ENST00000603677 TRMT13Q9NUP7 481 aaKnown RBP27.12■■□□□ 1.93
SSX2IP-209ENST00000603677 H3BRB1 525 aa27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 CYP3A4P08684 503 aa27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 KCNA2P16389 499 aa27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 RBL2Q08999 1139 aa27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 PTGISQ16647 500 aa27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 CEP55Q53EZ4 464 aa27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 FAM109BQ6ICB4 259 aaPredicted RBP27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 GALNT17Q6IS24 598 aa27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 IL27Q8NEV9 243 aa27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 PPP1R12CQ9BZL4 782 aa27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 MTIF3Q9H2K0 278 aaKnown RBP27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 TUT1Q9H6E5 874 aaKnown RBP27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 ZNF215Q9UL58 517 aaPredicted RBP27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 NFASCO94856 1347 aa27.11■■□□□ 1.93
SSX2IP-209ENST00000603677 SMAD3P84022 425 aaKnown RBP27.1■■□□□ 1.93
SSX2IP-209ENST00000603677 RETREG2Q8NC44 543 aa27.1■■□□□ 1.93
SSX2IP-209ENST00000603677 ZFP91Q96JP5 570 aaPredicted RBP27.1■■□□□ 1.93
SSX2IP-209ENST00000603677 SLKQ9H2G2 1235 aaPredicted RBP27.1■■□□□ 1.93
SSX2IP-209ENST00000603677 NCOA5Q9HCD5 579 aaKnown RBP27.1■■□□□ 1.93
SSX2IP-209ENST00000603677 MEIS1O00470 390 aa27.09■■□□□ 1.93
SSX2IP-209ENST00000603677 LGALS2P05162 132 aa27.09■■□□□ 1.93
SSX2IP-209ENST00000603677 CSF2RAP15509 400 aa27.09■■□□□ 1.93
SSX2IP-209ENST00000603677 CYP2C18P33260 490 aa27.09■■□□□ 1.93
SSX2IP-209ENST00000603677 C9orf50Q5SZB4 431 aa27.09■■□□□ 1.93
SSX2IP-209ENST00000603677 CRYGNQ8WXF5 182 aa27.09■■□□□ 1.93
SSX2IP-209ENST00000603677 SEPT1Q8WYJ6 367 aa27.09■■□□□ 1.93
SSX2IP-209ENST00000603677 KCNH7Q9NS40 1196 aa27.09■■□□□ 1.93
SSX2IP-209ENST00000603677 SOX1O00570 391 aaPredicted RBP27.08■■□□□ 1.93
SSX2IP-209ENST00000603677 PFKFB2O60825 505 aa27.08■■□□□ 1.93
SSX2IP-209ENST00000603677 GNAT1P11488 350 aa27.08■■□□□ 1.93
SSX2IP-209ENST00000603677 ARHGAP4P98171 946 aa27.08■■□□□ 1.93
SSX2IP-209ENST00000603677 PTK7Q13308 1070 aa27.08■■□□□ 1.93
SSX2IP-209ENST00000603677 AFAP1L1Q8TED9 768 aa27.08■■□□□ 1.93
SSX2IP-209ENST00000603677 TNPO1Q92973 898 aaKnown RBP27.08■■□□□ 1.93
SSX2IP-209ENST00000603677 RNPC3Q96LT9 517 aaKnown RBP27.08■■□□□ 1.93
SSX2IP-209ENST00000603677 HDAC6Q9UBN7 1215 aa27.08■■□□□ 1.93
SSX2IP-209ENST00000603677 ZNF286BP0CG31 522 aa27.07■■□□□ 1.92
SSX2IP-209ENST00000603677 HOXC8P31273 242 aa27.07■■□□□ 1.92
SSX2IP-209ENST00000603677 TMEM240Q5SV17 173 aa27.07■■□□□ 1.92
SSX2IP-209ENST00000603677 GDF6Q6KF10 455 aaPredicted RBP27.07■■□□□ 1.92
SSX2IP-209ENST00000603677 SDF4Q9BRK5 362 aa27.07■■□□□ 1.92
SSX2IP-209ENST00000603677 STK36Q9NRP7 1315 aa27.07■■□□□ 1.92
SSX2IP-209ENST00000603677 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 ATP9AO75110 1047 aa27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 XBP1P17861 261 aa27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 ZNF76P36508 570 aa27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 EPHB4P54760 987 aa27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 SETQ01105 290 aaPredicted RBP27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 RASIP1Q5U651 963 aa27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 HERVK_113Q902F9 699 aa27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.06■■□□□ 1.928e-11■□□□□ 8.1
SSX2IP-209ENST00000603677 ALG1Q9BT22 464 aa27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 WNT8AQ9H1J5 351 aa27.06■■□□□ 1.92
SSX2IP-209ENST00000603677 FGBP02675 491 aa27.05■■□□□ 1.92
SSX2IP-209ENST00000603677 CYP2C9P11712 490 aa27.05■■□□□ 1.92
SSX2IP-209ENST00000603677 CIITAP33076 1130 aa27.05■■□□□ 1.92
SSX2IP-209ENST00000603677 USP11P51784 963 aa27.05■■□□□ 1.92
SSX2IP-209ENST00000603677 C16orf59Q7L2K0 433 aa27.05■■□□□ 1.92
SSX2IP-209ENST00000603677 WASF1Q92558 559 aa27.05■■□□□ 1.92
SSX2IP-209ENST00000603677 LRCH3Q96II8 777 aa27.05■■□□□ 1.92
SSX2IP-209ENST00000603677 JPH1Q9HDC5 661 aaPredicted RBP27.05■■□□□ 1.92
SSX2IP-209ENST00000603677 PCDH10Q9P2E7 1040 aa27.05■■□□□ 1.92
SSX2IP-209ENST00000603677 SZT2Q5T011 3432 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 TMEM265A0A087WTH1 108 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 CAND2O75155 1236 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 AK2P54819 239 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 NLRP5P59047 1200 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 CHMP4BP1P59074 171 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 SCRN1Q12765 414 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 JAKMIP3Q5VZ66 844 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 DAGLBQ8NCG7 672 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 SMARCAD1Q9H4L7 1026 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 BCAS3Q9H6U6 928 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 TMEM260Q9NX78 707 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 SLC9A2Q9UBY0 812 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 TPCN1Q9ULQ1 816 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 PCDHA4Q9UN74 947 aa27.04■■□□□ 1.92
SSX2IP-209ENST00000603677 IQCF3P0C7M6 154 aa27.03■■□□□ 1.92
SSX2IP-209ENST00000603677 TCF7P36402 384 aaPredicted RBP27.03■■□□□ 1.92
SSX2IP-209ENST00000603677 CCL23P55773 120 aa27.03■■□□□ 1.92
SSX2IP-209ENST00000603677 ZNF365Q70YC5 407 aa27.03■■□□□ 1.92
SSX2IP-209ENST00000603677 EMSYQ7Z589 1322 aa27.03■■□□□ 1.92
SSX2IP-209ENST00000603677 NRCAMQ92823 1304 aa27.03■■□□□ 1.92
SSX2IP-209ENST00000603677 CTAGE1Q96RT6 745 aa27.03■■□□□ 1.92
SSX2IP-209ENST00000603677 ERAP1Q9NZ08 941 aa27.03■■□□□ 1.92
SSX2IP-209ENST00000603677 VPS54Q9P1Q0 977 aa27.03■■□□□ 1.92
SSX2IP-209ENST00000603677 DOCK5Q9H7D0 1870 aa27.02■■□□□ 1.92
SSX2IP-209ENST00000603677 UMODL1Q5DID0 1318 aa27.02■■□□□ 1.92
SSX2IP-209ENST00000603677 C17orf102A2RUQ5 167 aa27.02■■□□□ 1.92
SSX2IP-209ENST00000603677 RPLP2P05387 115 aaKnown RBP27.02■■□□□ 1.92
SSX2IP-209ENST00000603677 SLC26A2P50443 739 aa27.02■■□□□ 1.92
SSX2IP-209ENST00000603677 NEK4P51957 841 aa27.02■■□□□ 1.92
SSX2IP-209ENST00000603677 STK3Q13188 491 aa27.02■■□□□ 1.92
SSX2IP-209ENST00000603677 AGO4Q9HCK5 861 aaKnown RBP27.02■■□□□ 1.92
SSX2IP-209ENST00000603677 TBC1D22BQ9NU19 505 aa27.02■■□□□ 1.92
SSX2IP-209ENST00000603677 ACTN1P12814 892 aa27.01■■□□□ 1.91
SSX2IP-209ENST00000603677 SELPP16109 830 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms