RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 INF2Q27J81 1249 aa18.19■□□□□ 0.5
PPFIA3-213ENST00000602905 PRR16Q569H4 304 aa18.19■□□□□ 0.5
PPFIA3-213ENST00000602905 C1orf53Q5VUE5 145 aa18.19■□□□□ 0.5
PPFIA3-213ENST00000602905 PIK3AP1Q6ZUJ8 805 aa18.19■□□□□ 0.5
PPFIA3-213ENST00000602905 NEK8Q86SG6 692 aa18.19■□□□□ 0.5
PPFIA3-213ENST00000602905 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
PPFIA3-213ENST00000602905 CYP2W1Q8TAV3 490 aa18.19■□□□□ 0.5
PPFIA3-213ENST00000602905 OXER1Q8TDS5 423 aa18.19■□□□□ 0.5
PPFIA3-213ENST00000602905 KATNAL1Q9BW62 490 aa18.19■□□□□ 0.5
PPFIA3-213ENST00000602905 ATP11BQ9Y2G3 1177 aa18.19■□□□□ 0.5
PPFIA3-213ENST00000602905 FAM86B1E9PN63 330 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 K7ELQ4 463 aaPredicted RBP18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 ARVCFO00192 962 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 ATP9AO75110 1047 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 FAM86B2P0C5J1 330 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 ARP10275 920 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 GJB2P29033 226 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 SP4Q02446 784 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 ITGA7Q13683 1181 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 SNX17Q15036 470 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 HSDL1Q3SXM5 330 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 MOXD1Q6UVY6 613 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 C7orf61Q8IZ16 206 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 FBXO18Q8NFZ0 1043 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 SNX21Q969T3 373 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 ZNF577Q9BSK1 485 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 AGO4Q9HCK5 861 aaKnown RBP18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 SCN10AQ9Y5Y9 1956 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 KAT6AQ92794 2004 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 NFASCO94856 1347 aa18.18■□□□□ 0.5
PPFIA3-213ENST00000602905 DCDC2CA8MYV0 355 aa18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 BTBD18B2RXH4 712 aa18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 TLR3O15455 904 aaKnown RBP18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 GCFC2P16383 781 aaKnown RBP18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 CHMP4BP1P59074 171 aa18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 NR5A1Q13285 461 aa18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 CUL4AQ13619 759 aa18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 LETM2Q2VYF4 491 aa18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 TRIM60Q495X7 471 aa18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 JPH1Q9HDC5 661 aaPredicted RBP18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 SLC9A2Q9UBY0 812 aa18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 PRKAG2Q9UGJ0 569 aa18.17■□□□□ 0.5
PPFIA3-213ENST00000602905 IGLV3-22A0A075B6J6 115 aa18.16■□□□□ 0.5
PPFIA3-213ENST00000602905 H3BQV1 296 aa18.16■□□□□ 0.5
PPFIA3-213ENST00000602905 IPO5O00410 1097 aaKnown RBP18.16■□□□□ 0.5
PPFIA3-213ENST00000602905 PQBP1O60828 265 aaKnown RBP18.16■□□□□ 0.5
PPFIA3-213ENST00000602905 SEPT1Q8WYJ6 367 aa18.16■□□□□ 0.5
PPFIA3-213ENST00000602905 GPR20Q99678 358 aa18.16■□□□□ 0.5
PPFIA3-213ENST00000602905 FOXP1Q9H334 677 aaPredicted RBP18.16■□□□□ 0.5
PPFIA3-213ENST00000602905 TBC1D22BQ9NU19 505 aa18.16■□□□□ 0.5
PPFIA3-213ENST00000602905 CYP3A7-CYP3A51PA0A087WV96 503 aa18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 MARCH6O60337 910 aa18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 HOXD8P13378 290 aaPredicted RBP18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 CYP3A7P24462 503 aa18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 PSMC6P62333 389 aa18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 Q4G0T1 1027 aa18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 FAM47CQ5HY64 1035 aa18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 TOX2Q96NM4 488 aa18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 BCAS3Q9H6U6 928 aa18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 DDX25Q9UHL0 483 aaKnown RBP18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 ZNF215Q9UL58 517 aaPredicted RBP18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 DNAH12Q6ZR08 3092 aa18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 MYH9P35579 1960 aaKnown RBP18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 TNRC18O15417 2968 aaPredicted RBP18.15■□□□□ 0.5
PPFIA3-213ENST00000602905 DDX39AO00148 427 aaKnown RBP18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 CCNT1O60563 726 aaKnown RBP18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 TDP2O95551 362 aa18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 HSP90AA1P07900 732 aaKnown RBP18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 ZNF286BP0CG31 522 aa18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 PSEN2P49810 448 aa18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 TLE2Q04725 743 aa18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 UTP14CQ5TAP6 766 aaKnown RBP18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 LARP1BQ659C4 914 aaKnown RBP18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 NFRKBQ6P4R8 1299 aa18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 ANKRD33Q7Z3H0 272 aa18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 TNFRSF25Q93038 417 aa18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 INTS4Q96HW7 963 aaKnown RBP18.14■□□□□ 0.49
PPFIA3-213ENST00000602905 F2P00734 622 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 LGALS2P05162 132 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 CLTBP09497 229 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 PDCP20941 246 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 TCF7P36402 384 aaPredicted RBP18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 CDK7P50613 346 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 KRT76Q01546 638 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 PTPN11Q06124 597 aaPredicted RBP18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 ITGB3BPQ13352 177 aaPredicted RBP18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 MFSD10Q14728 455 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 NBPF20Q3BBV1 942 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 MCTP1Q6DN14 999 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 PPP4R3AQ6IN85 833 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 SLC43A3Q8NBI5 491 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 TEKT3Q9BXF9 490 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 AZI2Q9H6S1 392 aa18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 PRDM5Q9NQX1 630 aaPredicted RBP18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 NOL7Q9UMY1 257 aaKnown RBP18.13■□□□□ 0.49
PPFIA3-213ENST00000602905 H3BRB1 525 aa18.12■□□□□ 0.49
PPFIA3-213ENST00000602905 MSH4O15457 936 aa18.12■□□□□ 0.49
PPFIA3-213ENST00000602905 GAS7O60861 476 aa18.12■□□□□ 0.49
PPFIA3-213ENST00000602905 BAG4O95429 457 aaKnown RBP18.12■□□□□ 0.49
PPFIA3-213ENST00000602905 SUPT20HL2P0C7V6 817 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms