RNA–Protein interactions for RNA: ENST00000602544.5

SFXN2-206, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-206ENST00000602544 RETREG2Q8NC44 543 aa16.83■□□□□ 0.28
SFXN2-206ENST00000602544 PPP1R13LQ8WUF5 828 aa16.83■□□□□ 0.28
SFXN2-206ENST00000602544 ZNF215Q9UL58 517 aaPredicted RBP16.83■□□□□ 0.28
SFXN2-206ENST00000602544 ITGB8P26012 769 aa16.82■□□□□ 0.28
SFXN2-206ENST00000602544 CYP2C18P33260 490 aa16.82■□□□□ 0.28
SFXN2-206ENST00000602544 GALNT17Q6IS24 598 aa16.82■□□□□ 0.28
SFXN2-206ENST00000602544 FAM177A1Q8N128 213 aaPredicted RBP16.82■□□□□ 0.28
SFXN2-206ENST00000602544 CCDC155Q8N6L0 562 aa16.82■□□□□ 0.28
SFXN2-206ENST00000602544 NECAB1Q8N987 351 aa16.82■□□□□ 0.28
SFXN2-206ENST00000602544 KAT2BQ92831 832 aa16.82■□□□□ 0.28
SFXN2-206ENST00000602544 GPR20Q99678 358 aa16.82■□□□□ 0.28
SFXN2-206ENST00000602544 KCNH7Q9NS40 1196 aa16.82■□□□□ 0.28
SFXN2-206ENST00000602544 ORC3Q9UBD5 711 aaPredicted RBP16.82■□□□□ 0.28
SFXN2-206ENST00000602544 TCEAL9Q9UHQ7 104 aa16.82■□□□□ 0.28
SFXN2-206ENST00000602544 PCDHA4Q9UN74 947 aa16.82■□□□□ 0.28
SFXN2-206ENST00000602544 H3BRB1 525 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 ATP9AO75110 1047 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 F2P00734 622 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 LGALS2P05162 132 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 CYP2C9P11712 490 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 HOXD8P13378 290 aaPredicted RBP16.81■□□□□ 0.28
SFXN2-206ENST00000602544 KCNA2P16389 499 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 BFSP2Q13515 415 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 ME3Q16798 604 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 PLA2G4DQ86XP0 818 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 CYP2W1Q8TAV3 490 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 RASGRP4Q8TDF6 673 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 SEPT1Q8WYJ6 367 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 TUT1Q9H6E5 874 aaKnown RBP16.81■□□□□ 0.28
SFXN2-206ENST00000602544 BCAS3Q9H6U6 928 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 JPH1Q9HDC5 661 aaPredicted RBP16.81■□□□□ 0.28
SFXN2-206ENST00000602544 HDAC6Q9UBN7 1215 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 LIMCH1Q9UPQ0 1083 aa16.81■□□□□ 0.28
SFXN2-206ENST00000602544 STK36Q9NRP7 1315 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 MEIS1O00470 390 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 CYP3A4P08684 503 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 CCL23P55773 120 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 SETQ01105 290 aaPredicted RBP16.8■□□□□ 0.28
SFXN2-206ENST00000602544 NIPA1Q7RTP0 329 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 SESTD1Q86VW0 696 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 RPUSD2Q8IZ73 545 aaKnown RBP16.8■□□□□ 0.28
SFXN2-206ENST00000602544 BLIDQ8IZY5 108 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 GLG1Q92896 1179 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 GTF3C6Q969F1 213 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 NOC4LQ9BVI4 516 aaKnown RBP16.8■□□□□ 0.28
SFXN2-206ENST00000602544 AZI2Q9H6S1 392 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 BRMS1Q9HCU9 246 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 SLC9A2Q9UBY0 812 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 CEP290O15078 2479 aa16.8■□□□□ 0.28
SFXN2-206ENST00000602544 C17orf102A2RUQ5 167 aa16.79■□□□□ 0.28
SFXN2-206ENST00000602544 ARP10275 920 aa16.79■□□□□ 0.28
SFXN2-206ENST00000602544 GNAT1P11488 350 aa16.79■□□□□ 0.28
SFXN2-206ENST00000602544 CSF2RAP15509 400 aa16.79■□□□□ 0.28
SFXN2-206ENST00000602544 TCF7P36402 384 aaPredicted RBP16.79■□□□□ 0.28
SFXN2-206ENST00000602544 FXR1P51114 621 aaKnown RBP eCLIP16.79■□□□□ 0.28
SFXN2-206ENST00000602544 TRIM29Q14134 588 aa16.79■□□□□ 0.28
SFXN2-206ENST00000602544 SHHQ15465 462 aa16.79■□□□□ 0.28
SFXN2-206ENST00000602544 GDF6Q6KF10 455 aaPredicted RBP16.79■□□□□ 0.28
SFXN2-206ENST00000602544 RNPC3Q96LT9 517 aaKnown RBP16.79■□□□□ 0.28
SFXN2-206ENST00000602544 ZSCAN31Q96LW9 406 aaPredicted RBP16.79■□□□□ 0.28
SFXN2-206ENST00000602544 AIFM3Q96NN9 605 aa16.79■□□□□ 0.28
SFXN2-206ENST00000602544 C16orf70Q9BSU1 422 aa16.79■□□□□ 0.28
SFXN2-206ENST00000602544 AGO4Q9HCK5 861 aaKnown RBP16.79■□□□□ 0.28
SFXN2-206ENST00000602544 GTF2IRD1Q9UHL9 959 aa16.79■□□□□ 0.28
SFXN2-206ENST00000602544 ALPK3Q96L96 1907 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 NFASCO94856 1347 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 CCDC194A0A1B0GVG4 234 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 HAS3O00219 553 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 ST18O60284 1047 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 LRIT3Q3SXY7 679 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 PRR16Q569H4 304 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 PSRC1Q6PGN9 363 aaPredicted RBP16.78■□□□□ 0.28
SFXN2-206ENST00000602544 CAGE1Q8TC20 777 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 TNPO1Q92973 898 aaKnown RBP16.78■□□□□ 0.28
SFXN2-206ENST00000602544 ZNF577Q9BSK1 485 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 MTIF3Q9H2K0 278 aaKnown RBP16.78■□□□□ 0.28
SFXN2-206ENST00000602544 SMARCAD1Q9H4L7 1026 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 KCNJ14Q9UNX9 436 aa16.78■□□□□ 0.28
SFXN2-206ENST00000602544 FAM86B1E9PN63 330 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 DDX39AO00148 427 aaKnown RBP16.77■□□□□ 0.28
SFXN2-206ENST00000602544 LARGE1O95461 756 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 FAM86B2P0C5J1 330 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 SMIM10L2AP0DMW4 78 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 SMIM10L2BP0DMW5 78 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 ACRP10323 421 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 RBM25P49756 843 aaKnown RBP16.77■□□□□ 0.28
SFXN2-206ENST00000602544 USP11P51784 963 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 NONOQ15233 471 aaKnown RBP eCLIP16.77■□□□□ 0.28
SFXN2-206ENST00000602544 RABEP1Q15276 862 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 C9orf50Q5SZB4 431 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 KRT25Q7Z3Z0 450 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 TRIM50Q86XT4 487 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 DAGLBQ8NCG7 672 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 TBCKQ8TEA7 893 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 ATP6V0A1Q93050 837 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 IL23AQ9NPF7 189 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 TBC1D22BQ9NU19 505 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 ERAP1Q9NZ08 941 aa16.77■□□□□ 0.28
SFXN2-206ENST00000602544 UMODL1Q5DID0 1318 aa16.76■□□□□ 0.27
SFXN2-206ENST00000602544 IPO5O00410 1097 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms