RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 TEX2Q8IWB9 1127 aa29.87■■■□□ 2.37
PNKP-216ENST00000601816 ZNF713Q8N859 430 aaPredicted RBP29.87■■■□□ 2.37
PNKP-216ENST00000601816 GIMAP8Q8ND71 665 aaPredicted RBP29.87■■■□□ 2.37
PNKP-216ENST00000601816 MYLIPQ8WY64 445 aa29.87■■■□□ 2.37
PNKP-216ENST00000601816 GPR20Q99678 358 aa29.87■■■□□ 2.37
PNKP-216ENST00000601816 FTOQ9C0B1 505 aaKnown RBP eCLIP29.87■■■□□ 2.37
PNKP-216ENST00000601816 TUT1Q9H6E5 874 aaKnown RBP29.87■■■□□ 2.37
PNKP-216ENST00000601816 MSRAQ9UJ68 235 aa29.87■■■□□ 2.37
PNKP-216ENST00000601816 SELPP16109 830 aa29.86■■■□□ 2.37
PNKP-216ENST00000601816 RBL2Q08999 1139 aa29.86■■■□□ 2.37
PNKP-216ENST00000601816 PTK7Q13308 1070 aa29.86■■■□□ 2.37
PNKP-216ENST00000601816 LRRC8DQ7L1W4 858 aa29.86■■■□□ 2.37
PNKP-216ENST00000601816 USP26Q9BXU7 913 aa29.86■■■□□ 2.37
PNKP-216ENST00000601816 ZNF576Q9H609 170 aa29.86■■■□□ 2.37
PNKP-216ENST00000601816 RIC8AQ9NPQ8 531 aa29.86■■■□□ 2.37
PNKP-216ENST00000601816 SCN5AQ14524 2016 aa29.86■■■□□ 2.37
PNKP-216ENST00000601816 STXBP3O00186 592 aa29.85■■■□□ 2.37
PNKP-216ENST00000601816 EPB41L2O43491 1005 aaKnown RBP29.85■■■□□ 2.37
PNKP-216ENST00000601816 ITGB5P18084 799 aa29.85■■■□□ 2.37
PNKP-216ENST00000601816 ADD1P35611 737 aaKnown RBP29.85■■■□□ 2.37
PNKP-216ENST00000601816 ADCY7P51828 1080 aa29.85■■■□□ 2.37
PNKP-216ENST00000601816 SP4Q02446 784 aa29.85■■■□□ 2.37
PNKP-216ENST00000601816 PPP4R2Q9NY27 417 aa29.85■■■□□ 2.37
PNKP-216ENST00000601816 BARHL2Q9NY43 387 aa29.85■■■□□ 2.37
PNKP-216ENST00000601816 UBIAD1Q9Y5Z9 338 aa29.85■■■□□ 2.37
PNKP-216ENST00000601816 CKBP12277 381 aa29.84■■■□□ 2.37
PNKP-216ENST00000601816 ZNF200P98182 395 aaPredicted RBP29.84■■■□□ 2.37
PNKP-216ENST00000601816 FBXL16Q8N461 479 aa29.84■■■□□ 2.37
PNKP-216ENST00000601816 NID2Q14112 1375 aa29.83■■■□□ 2.37
PNKP-216ENST00000601816 PARNO95453 639 aaKnown RBP29.83■■■□□ 2.37
PNKP-216ENST00000601816 KCNA2P16389 499 aa29.83■■■□□ 2.37
PNKP-216ENST00000601816 ATP2A2P16615 1042 aaKnown RBP29.83■■■□□ 2.37
PNKP-216ENST00000601816 MTMR1Q13613 665 aa29.83■■■□□ 2.37
PNKP-216ENST00000601816 GRIN2CQ14957 1233 aa29.83■■■□□ 2.37
PNKP-216ENST00000601816 GLT8D2Q9H1C3 349 aa29.83■■■□□ 2.37
PNKP-216ENST00000601816 JADE2Q9NQC1 790 aa29.83■■■□□ 2.37
PNKP-216ENST00000601816 ZNF215Q9UL58 517 aaPredicted RBP29.83■■■□□ 2.37
PNKP-216ENST00000601816 C17orf102A2RUQ5 167 aa29.82■■■□□ 2.36
PNKP-216ENST00000601816 SMCO2A6NFE2 343 aa29.82■■■□□ 2.36
PNKP-216ENST00000601816 FOSP01100 380 aaPredicted RBP29.82■■■□□ 2.36
PNKP-216ENST00000601816 SMIM10L2AP0DMW4 78 aa29.82■■■□□ 2.36
PNKP-216ENST00000601816 SMIM10L2BP0DMW5 78 aa29.82■■■□□ 2.36
PNKP-216ENST00000601816 FOSL2P15408 326 aa29.82■■■□□ 2.36
PNKP-216ENST00000601816 HIC1Q14526 733 aa29.82■■■□□ 2.36
PNKP-216ENST00000601816 UTP14CQ5TAP6 766 aaKnown RBP29.82■■■□□ 2.36
PNKP-216ENST00000601816 AGXT2Q9BYV1 514 aa29.82■■■□□ 2.36
PNKP-216ENST00000601816 DOCK5Q9H7D0 1870 aa29.82■■■□□ 2.36
PNKP-216ENST00000601816 ATP9AO75110 1047 aa29.81■■■□□ 2.36
PNKP-216ENST00000601816 PFKFB3Q16875 520 aaPredicted RBP29.81■■■□□ 2.36
PNKP-216ENST00000601816 TRIM71Q2Q1W2 868 aaKnown RBP29.81■■■□□ 2.36
PNKP-216ENST00000601816 ERICH6BQ5W0A0 696 aa29.81■■■□□ 2.36
PNKP-216ENST00000601816 TRIM50Q86XT4 487 aa29.81■■■□□ 2.36
PNKP-216ENST00000601816 NKX2-4Q9H2Z4 354 aa29.81■■■□□ 2.36
PNKP-216ENST00000601816 TELO2Q9Y4R8 837 aa29.81■■■□□ 2.36
PNKP-216ENST00000601816 MAFGO15525 162 aa29.8■■■□□ 2.36
PNKP-216ENST00000601816 SCG2P13521 617 aa29.8■■■□□ 2.36
PNKP-216ENST00000601816 RABGGTBP53611 331 aa29.8■■■□□ 2.36
PNKP-216ENST00000601816 SERINC5Q86VE9 423 aa29.8■■■□□ 2.36
PNKP-216ENST00000601816 ATP6V0A1Q93050 837 aa29.8■■■□□ 2.36
PNKP-216ENST00000601816 WNT8BQ93098 351 aa29.8■■■□□ 2.36
PNKP-216ENST00000601816 PGBD1Q96JS3 809 aa29.8■■■□□ 2.36
PNKP-216ENST00000601816 ANO3Q9BYT9 981 aa29.8■■■□□ 2.36
PNKP-216ENST00000601816 PKD2L1Q9P0L9 805 aa29.8■■■□□ 2.36
PNKP-216ENST00000601816 YBX2Q9Y2T7 364 aaKnown RBP29.8■■■□□ 2.36
PNKP-216ENST00000601816 TRIP12Q14669 1992 aaPredicted RBP29.8■■■□□ 2.36
PNKP-216ENST00000601816 HOXC8P31273 242 aa29.79■■■□□ 2.36
PNKP-216ENST00000601816 AP3B2Q13367 1082 aa29.79■■■□□ 2.36
PNKP-216ENST00000601816 MAFAQ8NHW3 353 aaPredicted RBP29.79■■■□□ 2.36
PNKP-216ENST00000601816 SLC9A7Q96T83 725 aa29.79■■■□□ 2.36
PNKP-216ENST00000601816 SLC28A3Q9HAS3 691 aa29.79■■■□□ 2.36
PNKP-216ENST00000601816 PCDHA11Q9Y5I1 949 aa29.79■■■□□ 2.36
PNKP-216ENST00000601816 BAIAP3O94812 1187 aa29.78■■■□□ 2.36
PNKP-216ENST00000601816 TCF7P36402 384 aaPredicted RBP29.78■■■□□ 2.36
PNKP-216ENST00000601816 GPNMBQ14956 572 aa29.78■■■□□ 2.36
PNKP-216ENST00000601816 ZNF618Q5T7W0 954 aa29.78■■■□□ 2.36
PNKP-216ENST00000601816 RUFY3Q7L099 469 aa29.78■■■□□ 2.36
PNKP-216ENST00000601816 MXRA8Q9BRK3 442 aa29.78■■■□□ 2.36
PNKP-216ENST00000601816 RNPEPQ9H4A4 650 aa29.78■■■□□ 2.36
PNKP-216ENST00000601816 TMEM260Q9NX78 707 aa29.78■■■□□ 2.36
PNKP-216ENST00000601816 GNAT1P11488 350 aa29.77■■■□□ 2.36
PNKP-216ENST00000601816 PHOSPHO2Q8TCD6 241 aa29.77■■■□□ 2.36
PNKP-216ENST00000601816 SEPT1Q8WYJ6 367 aa29.77■■■□□ 2.36
PNKP-216ENST00000601816 ZSWIM6Q9HCJ5 1215 aa29.77■■■□□ 2.36
PNKP-216ENST00000601816 PRPF3O43395 683 aaKnown RBP29.76■■■□□ 2.35
PNKP-216ENST00000601816 NBNO60934 754 aa29.76■■■□□ 2.35
PNKP-216ENST00000601816 CXCL10P02778 98 aa29.76■■■□□ 2.35
PNKP-216ENST00000601816 SREBF1P36956 1147 aa29.76■■■□□ 2.35
PNKP-216ENST00000601816 THPOP40225 353 aa29.76■■■□□ 2.35
PNKP-216ENST00000601816 CLK2P49760 499 aaKnown RBP29.76■■■□□ 2.35
PNKP-216ENST00000601816 AKAP17AQ02040 695 aaKnown RBP29.76■■■□□ 2.35
PNKP-216ENST00000601816 CNKSR3Q6P9H4 555 aa29.76■■■□□ 2.35
PNKP-216ENST00000601816 TRAF7Q6Q0C0 670 aa29.76■■■□□ 2.35
PNKP-216ENST00000601816 CCDC12Q8WUD4 166 aaPredicted RBP29.76■■■□□ 2.35
PNKP-216ENST00000601816 KCNH7Q9NS40 1196 aa29.76■■■□□ 2.35
PNKP-216ENST00000601816 CYP46A1Q9Y6A2 500 aa29.76■■■□□ 2.35
PNKP-216ENST00000601816 GBF1Q92538 1859 aa29.76■■■□□ 2.35
PNKP-216ENST00000601816 TREHO43280 583 aa29.75■■■□□ 2.35
PNKP-216ENST00000601816 KCNJ6P48051 423 aa29.75■■■□□ 2.35
PNKP-216ENST00000601816 EVCP57679 992 aa29.75■■■□□ 2.35
PNKP-216ENST00000601816 PHKBQ93100 1093 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms