RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 PHLPP2Q6ZVD8 1323 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 CLCN6P51797 869 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 WHAMMP3Q1A5X7 153 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 ANKRD13CQ8N6S4 541 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 MMS19Q96T76 1030 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 WDR11Q9BZH6 1224 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 PARP4Q9UKK3 1724 aaKnown RBP12.13□□□□□ -0.47
ZNF558-207ENST00000601372 C2orf54Q08AI8 447 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 CUL4BQ13620 913 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 FAM178BQ8IXR5 827 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 MKRN1Q9UHC7 482 aaKnown RBP12.13□□□□□ -0.47
ZNF558-207ENST00000601372 PCDHB13Q9Y5F0 798 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 MON2Q7Z3U7 1717 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 C12orf60Q5U649 245 aa12.13□□□□□ -0.47
ZNF558-207ENST00000601372 JPH2Q9BR39 696 aaPredicted RBP12.13□□□□□ -0.47
ZNF558-207ENST00000601372 GNAT1P11488 350 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 GTF2A1P52655 376 aaPredicted RBP12.12□□□□□ -0.47
ZNF558-207ENST00000601372 PRPF3O43395 683 aaKnown RBP12.12□□□□□ -0.47
ZNF558-207ENST00000601372 COPB2P35606 906 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 POLR2FP61218 127 aaKnown RBP12.12□□□□□ -0.47
ZNF558-207ENST00000601372 SARM1Q6SZW1 724 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 OTUD6BQ8N6M0 293 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 EPN1Q9Y6I3 576 aaPredicted RBP12.12□□□□□ -0.47
ZNF558-207ENST00000601372 ZBBXA8MT70 800 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 P4HA1P13674 534 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 IFNAR1P17181 557 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 ARHGAP44Q17R89 818 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 ZNF658Q5TYW1 1059 aaPredicted RBP12.12□□□□□ -0.47
ZNF558-207ENST00000601372 IFT20Q8IY31 132 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 ENAHQ8N8S7 591 aaPredicted RBP12.12□□□□□ -0.47
ZNF558-207ENST00000601372 NSUN6Q8TEA1 469 aaKnown RBP12.12□□□□□ -0.47
ZNF558-207ENST00000601372 GLIS2Q9BZE0 524 aaPredicted RBP12.12□□□□□ -0.47
ZNF558-207ENST00000601372 EPC1Q9H2F5 836 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 KBTBD13C9JR72 458 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 TNNC2P02585 160 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 IFRD2Q12894 506 aaPredicted RBP12.12□□□□□ -0.47
ZNF558-207ENST00000601372 CCDC121Q6ZUS5 278 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 IWS1Q96ST2 819 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 FCGRTP55899 365 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 PSMD1Q99460 953 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 KCNK9Q9NPC2 374 aa12.12□□□□□ -0.47
ZNF558-207ENST00000601372 SRGAP2CP0DJJ0 459 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 EXOSC10Q01780 885 aaKnown RBP12.11□□□□□ -0.47
ZNF558-207ENST00000601372 BRD3Q15059 726 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
ZNF558-207ENST00000601372 SMC1BQ8NDV3 1235 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 TUBGCP2Q9BSJ2 902 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 ADM5C9JUS6 153 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 CTNND1O60716 968 aaKnown RBP12.11□□□□□ -0.47
ZNF558-207ENST00000601372 SHC4Q6S5L8 630 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 CLEC10AQ8IUN9 316 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 UPF1Q92900 1129 aaKnown RBP eCLIP12.11□□□□□ -0.47
ZNF558-207ENST00000601372 ALDH8A1Q9H2A2 487 aaPredicted RBP12.11□□□□□ -0.47
ZNF558-207ENST00000601372 H0YCG3 227 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 GYS2P54840 703 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 AKT1S1Q96B36 256 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 NLRP4Q96MN2 994 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 CXCR5P32302 372 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 HOOK3Q86VS8 718 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 EXOC8Q8IYI6 725 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 MYOCDQ8IZQ8 938 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 OR6J1Q8NGC5 347 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 MRRFQ96E11 262 aaKnown RBP12.11□□□□□ -0.47
ZNF558-207ENST00000601372 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.11□□□□□ -0.47
ZNF558-207ENST00000601372 CPLX4Q7Z7G2 160 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 POMGNT1Q8WZA1 660 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 SLC4A9Q96Q91 983 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 GSDMAQ96QA5 445 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 MYO1AQ9UBC5 1043 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 UTP11Q9Y3A2 253 aaKnown RBP12.11□□□□□ -0.47
ZNF558-207ENST00000601372 TRIM49BA6NDI0 452 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 SLFN14P0C7P3 912 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 ARMCX5Q6P1M9 558 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 CCDC91Q7Z6B0 441 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 SRGAP1Q7Z6B7 1085 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 MICAL1Q8TDZ2 1067 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 OPTNQ96CV9 577 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 SPATA33Q96N06 139 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 RASSF4Q9H2L5 321 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 SENP2Q9HC62 589 aa12.11□□□□□ -0.47
ZNF558-207ENST00000601372 TFRCP02786 760 aaKnown RBP12.1□□□□□ -0.47
ZNF558-207ENST00000601372 ATF7P17544 494 aaPredicted RBP12.1□□□□□ -0.47
ZNF558-207ENST00000601372 SEL1L2Q5TEA6 688 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 ADAT2Q7Z6V5 191 aaKnown RBP12.1□□□□□ -0.47
ZNF558-207ENST00000601372 PARD6BQ9BYG5 372 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 KMT5AQ9NQR1 393 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 CFAP221Q4G0U5 840 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 USP17L6PQ6QN14 398 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 GPRC5AQ8NFJ5 357 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 SPDYE2BA6NHP3 402 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 CTDNEP1O95476 244 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 SPDYE6P0CI01 402 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 GCFC2P16383 781 aaKnown RBP12.1□□□□□ -0.47
ZNF558-207ENST00000601372 PRPHP41219 470 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 PPP2R5AQ15172 486 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 U2AF1L4Q8WU68 220 aaKnown RBP12.1□□□□□ -0.47
ZNF558-207ENST00000601372 DPF2Q92785 391 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 AKAP12Q02952 1782 aa12.1□□□□□ -0.47
ZNF558-207ENST00000601372 ABCB4P21439 1286 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms