RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 GTF2IRD1Q9UHL9 959 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 UMODL1Q5DID0 1318 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 WDR81Q562E7 1941 aa19.66■□□□□ 0.74
HERC3-214ENST00000601319 GNA11P29992 359 aa19.65■□□□□ 0.74
HERC3-214ENST00000601319 KIAA0753Q2KHM9 967 aa19.65■□□□□ 0.74
HERC3-214ENST00000601319 PSRC1Q6PGN9 363 aaPredicted RBP19.65■□□□□ 0.74
HERC3-214ENST00000601319 REXO1Q8N1G1 1221 aaKnown RBP19.65■□□□□ 0.74
HERC3-214ENST00000601319 C7orf31Q8N865 590 aa19.65■□□□□ 0.74
HERC3-214ENST00000601319 CRYGNQ8WXF5 182 aa19.65■□□□□ 0.74
HERC3-214ENST00000601319 BCAS3Q9H6U6 928 aa19.65■□□□□ 0.74
HERC3-214ENST00000601319 IL23AQ9NPF7 189 aa19.65■□□□□ 0.74
HERC3-214ENST00000601319 SH3GLB2Q9NR46 395 aa19.65■□□□□ 0.74
HERC3-214ENST00000601319 CPLX1O14810 134 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 SORBS3O60504 671 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 LGALS2P05162 132 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 CYP2C9P11712 490 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 RBL2Q08999 1139 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 ANKRD1Q15327 319 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 PTGISQ16647 500 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 GDF6Q6KF10 455 aaPredicted RBP19.64■□□□□ 0.73
HERC3-214ENST00000601319 CPLX2Q6PUV4 134 aaKnown RBP19.64■□□□□ 0.73
HERC3-214ENST00000601319 NIPA1Q7RTP0 329 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 BICD2Q8TD16 824 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 RNPC3Q96LT9 517 aaKnown RBP19.64■□□□□ 0.73
HERC3-214ENST00000601319 CTAGE1Q96RT6 745 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.64■□□□□ 0.73
HERC3-214ENST00000601319 MXRA8Q9BRK3 442 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 TMEM260Q9NX78 707 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 NOD1Q9Y239 953 aa19.64■□□□□ 0.73
HERC3-214ENST00000601319 ATP9AO75110 1047 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 DEXIO95424 95 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 HOXC8P31273 242 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 ARHGAP4P98171 946 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 CEP55Q53EZ4 464 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 RASIP1Q5U651 963 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 PPP4R3CPQ6ZMV5 832 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 C16orf59Q7L2K0 433 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 CCDC155Q8N6L0 562 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 CAGE1Q8TC20 777 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 PPP1R13LQ8WUF5 828 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 PGBD1Q96JS3 809 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 HDAC6Q9UBN7 1215 aa19.63■□□□□ 0.73
HERC3-214ENST00000601319 NFASCO94856 1347 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 H3BRB1 525 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 CDKL5O76039 1030 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 SEC24BO95487 1268 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 PFKMP08237 780 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 CYP3A4P08684 503 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 RFC2P35250 354 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 CHMP4BP1P59074 171 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 SMAD3P84022 425 aaKnown RBP19.62■□□□□ 0.73
HERC3-214ENST00000601319 SSRP1Q08945 709 aaKnown RBP19.62■□□□□ 0.73
HERC3-214ENST00000601319 BFSP2Q13515 415 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 TMEM240Q5SV17 173 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 ALG1Q9BT22 464 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 TUT1Q9H6E5 874 aaKnown RBP19.62■□□□□ 0.73
HERC3-214ENST00000601319 KCNH7Q9NS40 1196 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 ZNF215Q9UL58 517 aaPredicted RBP19.62■□□□□ 0.73
HERC3-214ENST00000601319 CHD9Q3L8U1 2897 aa19.62■□□□□ 0.73
HERC3-214ENST00000601319 STK36Q9NRP7 1315 aa19.61■□□□□ 0.73
HERC3-214ENST00000601319 MEIS1O00470 390 aa19.61■□□□□ 0.73
HERC3-214ENST00000601319 PFKFB2O60825 505 aa19.61■□□□□ 0.73
HERC3-214ENST00000601319 AK2P54819 239 aa19.61■□□□□ 0.73
HERC3-214ENST00000601319 CCL23P55773 120 aa19.61■□□□□ 0.73
HERC3-214ENST00000601319 JAKMIP3Q5VZ66 844 aa19.61■□□□□ 0.73
HERC3-214ENST00000601319 FAM109BQ6ICB4 259 aaPredicted RBP19.61■□□□□ 0.73
HERC3-214ENST00000601319 AFAP1L1Q8TED9 768 aa19.61■□□□□ 0.73
HERC3-214ENST00000601319 LARP6Q9BRS8 491 aaKnown RBP19.61■□□□□ 0.73
HERC3-214ENST00000601319 VPS54Q9P1Q0 977 aa19.61■□□□□ 0.73
HERC3-214ENST00000601319 TPCN1Q9ULQ1 816 aa19.61■□□□□ 0.73
HERC3-214ENST00000601319 SIP14410 1827 aa19.6■□□□□ 0.73
HERC3-214ENST00000601319 TET1Q8NFU7 2136 aa19.6■□□□□ 0.73
HERC3-214ENST00000601319 EMSYQ7Z589 1322 aa19.6■□□□□ 0.73
HERC3-214ENST00000601319 ADAMTS3O15072 1205 aa19.6■□□□□ 0.73
HERC3-214ENST00000601319 SCRN1Q12765 414 aa19.6■□□□□ 0.73
HERC3-214ENST00000601319 STK3Q13188 491 aa19.6■□□□□ 0.73
HERC3-214ENST00000601319 PTK7Q13308 1070 aa19.6■□□□□ 0.73
HERC3-214ENST00000601319 C8orf34Q49A92 452 aa19.6■□□□□ 0.73
HERC3-214ENST00000601319 RPUSD2Q8IZ73 545 aaKnown RBP19.6■□□□□ 0.73
HERC3-214ENST00000601319 CYP2W1Q8TAV3 490 aa19.6■□□□□ 0.73
HERC3-214ENST00000601319 DHX38Q92620 1227 aaKnown RBP19.6■□□□□ 0.73
HERC3-214ENST00000601319 SLKQ9H2G2 1235 aaPredicted RBP19.6■□□□□ 0.73
HERC3-214ENST00000601319 JPH1Q9HDC5 661 aaPredicted RBP19.6■□□□□ 0.73
HERC3-214ENST00000601319 MYH9P35579 1960 aaKnown RBP19.6■□□□□ 0.73
HERC3-214ENST00000601319 PTPRSQ13332 1948 aa19.6■□□□□ 0.73
HERC3-214ENST00000601319 IGLV3-22A0A075B6J6 115 aa19.59■□□□□ 0.73
HERC3-214ENST00000601319 PPFIA3O75145 1194 aa19.59■□□□□ 0.73
HERC3-214ENST00000601319 TCF7P36402 384 aaPredicted RBP19.59■□□□□ 0.73
HERC3-214ENST00000601319 ZNF365Q70YC5 407 aa19.59■□□□□ 0.73
HERC3-214ENST00000601319 SERINC5Q86VE9 423 aa19.59■□□□□ 0.73
HERC3-214ENST00000601319 RETREG2Q8NC44 543 aa19.59■□□□□ 0.73
HERC3-214ENST00000601319 HERVK_113Q902F9 699 aa19.59■□□□□ 0.73
HERC3-214ENST00000601319 VWCEQ96DN2 955 aa19.59■□□□□ 0.73
HERC3-214ENST00000601319 SCLYQ96I15 445 aa19.59■□□□□ 0.73
HERC3-214ENST00000601319 MTIF3Q9H2K0 278 aaKnown RBP19.59■□□□□ 0.73
HERC3-214ENST00000601319 AGO4Q9HCK5 861 aaKnown RBP19.59■□□□□ 0.73
HERC3-214ENST00000601319 TELO2Q9Y4R8 837 aa19.59■□□□□ 0.73
HERC3-214ENST00000601319 FAM86B1E9PN63 330 aa19.58■□□□□ 0.72
HERC3-214ENST00000601319 PARNO95453 639 aaKnown RBP19.58■□□□□ 0.72
HERC3-214ENST00000601319 FAM86B2P0C5J1 330 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms