RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 TEX2Q8IWB9 1127 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 KLHL7Q8IXQ5 586 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 PBKQ96KB5 322 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 CCDC114Q96M63 670 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 SLC12A6Q9UHW9 1150 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 NIP7Q9Y221 180 aaKnown RBP eCLIP20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 NFS1Q9Y697 457 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 KIF1CO43896 1103 aaKnown RBP20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 ZPR1O75312 459 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 ERVK-9P63128 1117 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 MTMR3Q13615 1198 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 RPS6KA1Q15418 735 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 BRINP3Q76B58 766 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 FBXO33Q7Z6M2 555 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 SPZ1Q9BXG8 430 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 CENPHQ9H3R5 247 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 DONSONQ9NYP3 566 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 PACSIN2Q9UNF0 486 aaPredicted RBP20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 TAF1P21675 1872 aa20.48■□□□□ 0.87
ARHGEF1-221ENST00000600387 KIF13BQ9NQT8 1826 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 SMCO2A6NFE2 343 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 CAMTA2O94983 1202 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 ECHS1P30084 290 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 FXR2P51116 673 aaKnown RBP eCLIP20.47■□□□□ 0.873e-6■■■■□ 20
ARHGEF1-221ENST00000600387 POLR2FP61218 127 aaKnown RBP20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 C10orf76Q5T2E6 689 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 AGBL2Q5U5Z8 902 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 C12orf60Q5U649 245 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 CALR3Q96L12 384 aaKnown RBP20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 PNMA5Q96PV4 448 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 LSM14BQ9BX40 385 aaKnown RBP20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 DDX20Q9UHI6 824 aaKnown RBP20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 WTIPA6NIX2 430 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 TMCO5BA8MYB1 307 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 USP17L8P0C7I0 530 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 CTNNA1P35221 906 aaKnown RBP20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 TXKP42681 527 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 RNASE9P60153 205 aaKnown RBP20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 TMEM266Q2M3C6 531 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 WLSQ5T9L3 541 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 MYOCDQ8IZQ8 938 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 SCFD2Q8WU76 684 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 RAD54LQ92698 747 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 RAB34Q9BZG1 259 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 CCDC87Q9NVE4 849 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 AIPL1Q9NZN9 384 aa20.47■□□□□ 0.87
ARHGEF1-221ENST00000600387 GNA14O95837 355 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 ZNF844Q08AG5 666 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 TAX1BP1Q86VP1 789 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 ACTRT1Q8TDG2 376 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 TBCKQ8TEA7 893 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 P3H4Q92791 437 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 CEP63Q96MT8 703 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 MKNK2Q9HBH9 465 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 MCM8Q9UJA3 840 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 MYH7BA7E2Y1 1941 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 A0A087X0T9 212 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 C5orf60A6NFR6 353 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 BHMG1C9JSJ3 638 aaPredicted RBP20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 KCNK3O14649 394 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 PAEPP09466 180 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 FAM228BP0C875 321 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 TSPY3P0CV98 308 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 TSPY8P0CW00 308 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 PPP2R2AP63151 447 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 KLHL30Q0D2K2 578 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 SNCBQ16143 134 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 UAP1Q16222 522 aaPredicted RBP20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 IFI16Q16666 785 aaKnown RBP20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 SOGA3Q5TF21 947 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 INTS5Q6P9B9 1019 aaKnown RBP20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 MTMR9Q96QG7 549 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 MINPP1Q9UNW1 487 aa20.46■□□□□ 0.87
ARHGEF1-221ENST00000600387 KLRF2D3W0D1 207 aa20.45■□□□□ 0.86
ARHGEF1-221ENST00000600387 ERCC3P19447 782 aa20.45■□□□□ 0.86
ARHGEF1-221ENST00000600387 USP11P51784 963 aa20.45■□□□□ 0.86
ARHGEF1-221ENST00000600387 CALCRLQ16602 461 aa20.45■□□□□ 0.86
ARHGEF1-221ENST00000600387 ZCWPW2Q504Y3 356 aa20.45■□□□□ 0.86
ARHGEF1-221ENST00000600387 MAGEC3Q8TD91 643 aa20.45■□□□□ 0.86
ARHGEF1-221ENST00000600387 DDX12PQ92771 950 aa20.45■□□□□ 0.86
ARHGEF1-221ENST00000600387 ROBO3Q96MS0 1386 aa20.45■□□□□ 0.86
ARHGEF1-221ENST00000600387 USP17L3A6NCW0 530 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 USP17L4A6NCW7 530 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 TRAF5O00463 557 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 KIF4AO95239 1232 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 RAPGEF1Q13905 1077 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 SEPT2Q15019 361 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 ASIC2Q16515 512 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 USP17L1Q7RTZ2 530 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 PARP9Q8IXQ6 854 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 ADAMTS1Q9UHI8 967 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 CHRM1P11229 460 aaPredicted RBP20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 TRHP20396 242 aaPredicted RBP20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 PDIA5Q14554 519 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 ODF2Q5BJF6 829 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 ANKRD20A8PQ5CZ79 823 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 CACNA2D3Q8IZS8 1091 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 SEC16BQ96JE7 1060 aa20.44■□□□□ 0.86
ARHGEF1-221ENST00000600387 TMEM47Q9BQJ4 181 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms