RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 PRR16Q569H4 304 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 PPP4R3AQ6IN85 833 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 METTL7BQ6UX53 244 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 PCSK9Q8NBP7 692 aaKnown RBP15.62■□□□□ 0.09
VRK3-219ENST00000600137 PPTC7Q8NI37 304 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 KAT2BQ92831 832 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 FERMT2Q96AC1 680 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 UIMC1Q96RL1 719 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 C11orf49Q9H6J7 331 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 SPC25Q9HBM1 224 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 BRMS1Q9HCU9 246 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 KIF3AQ9Y496 699 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 NFASCO94856 1347 aa15.62■□□□□ 0.09
VRK3-219ENST00000600137 KBTBD13C9JR72 458 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
VRK3-219ENST00000600137 SYT1P21579 422 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 TOB1P50616 345 aaPredicted RBP15.61■□□□□ 0.09
VRK3-219ENST00000600137 SAFBQ15424 915 aaKnown RBP eCLIP15.61■□□□□ 0.09
VRK3-219ENST00000600137 LETM2Q2VYF4 491 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 B3GNT9Q6UX72 402 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 CXCL17Q6UXB2 119 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 NOSTRINQ8IVI9 506 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 SLC43A3Q8NBI5 491 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 ETNPPLQ8TBG4 499 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 SLC5A5Q92911 643 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 GJA10Q969M2 543 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 GPR20Q99678 358 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 SENP6Q9GZR1 1112 aaPredicted RBP15.61■□□□□ 0.09
VRK3-219ENST00000600137 PKD2L1Q9P0L9 805 aa15.61■□□□□ 0.09
VRK3-219ENST00000600137 IPO5O00410 1097 aaKnown RBP15.6■□□□□ 0.09
VRK3-219ENST00000600137 PPFIA4O75335 1185 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 ATG7O95352 703 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 CCNE2O96020 404 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 CPT1AP50416 773 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 CDK7P50613 346 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 SNX17Q15036 470 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 SLC39A5Q6ZMH5 540 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 GIMAP8Q8ND71 665 aaPredicted RBP15.6■□□□□ 0.09
VRK3-219ENST00000600137 HAS1Q92839 578 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 SPATA33Q96N06 139 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 C16orf70Q9BSU1 422 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 MLXIPQ9HAP2 919 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 KCNMB3Q9NPA1 279 aa15.6■□□□□ 0.09
VRK3-219ENST00000600137 HAS3O00219 553 aa15.59■□□□□ 0.09
VRK3-219ENST00000600137 PSMD10O75832 226 aa15.59■□□□□ 0.09
VRK3-219ENST00000600137 SETQ01105 290 aaPredicted RBP15.59■□□□□ 0.09
VRK3-219ENST00000600137 LRRC26Q2I0M4 334 aa15.59■□□□□ 0.09
VRK3-219ENST00000600137 C1orf53Q5VUE5 145 aa15.59■□□□□ 0.09
VRK3-219ENST00000600137 PCYT2Q99447 389 aa15.59■□□□□ 0.09
VRK3-219ENST00000600137 ZNF577Q9BSK1 485 aa15.59■□□□□ 0.09
VRK3-219ENST00000600137 POLR3EQ9NVU0 708 aa15.59■□□□□ 0.09
VRK3-219ENST00000600137 DDX25Q9UHL0 483 aaKnown RBP15.59■□□□□ 0.09
VRK3-219ENST00000600137 MTMR6Q9Y217 621 aa15.59■□□□□ 0.09
VRK3-219ENST00000600137 ELP1O95163 1332 aa15.59■□□□□ 0.09
VRK3-219ENST00000600137 WDR81Q562E7 1941 aa15.58■□□□□ 0.09
VRK3-219ENST00000600137 IGKV6D-21A0A0A0MT36 114 aa15.58■□□□□ 0.08
VRK3-219ENST00000600137 CCNT1O60563 726 aaKnown RBP15.58■□□□□ 0.08
VRK3-219ENST00000600137 KPNA6O60684 536 aa15.58■□□□□ 0.08
VRK3-219ENST00000600137 MYL3P08590 195 aa15.58■□□□□ 0.08
VRK3-219ENST00000600137 GCFC2P16383 781 aaKnown RBP15.58■□□□□ 0.08
VRK3-219ENST00000600137 DGKDQ16760 1214 aa15.58■□□□□ 0.08
VRK3-219ENST00000600137 C4orf32Q8N8J7 132 aa15.58■□□□□ 0.08
VRK3-219ENST00000600137 SEPT1Q8WYJ6 367 aa15.58■□□□□ 0.08
VRK3-219ENST00000600137 MTMR9Q96QG7 549 aa15.58■□□□□ 0.08
VRK3-219ENST00000600137 TMEM60Q9H2L4 133 aa15.58■□□□□ 0.08
VRK3-219ENST00000600137 TBC1D22BQ9NU19 505 aa15.58■□□□□ 0.08
VRK3-219ENST00000600137 SLC9A2Q9UBY0 812 aa15.58■□□□□ 0.08
VRK3-219ENST00000600137 H3BQV1 296 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 ZEB2O60315 1214 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 CABYRO75952 493 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 F2P00734 622 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 PDCP20941 246 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 ATN1P54259 1190 aaPredicted RBP15.57■□□□□ 0.08
VRK3-219ENST00000600137 ACTR2P61160 394 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 PSMC6P62333 389 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 ABHD15Q6UXT9 468 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 POTEDQ86YR6 584 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 GLT1D1Q96MS3 346 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 RIT2Q99578 217 aa15.57■□□□□ 0.08
VRK3-219ENST00000600137 MTG1Q9BT17 334 aaPredicted RBP15.57■□□□□ 0.08
VRK3-219ENST00000600137 JPH1Q9HDC5 661 aaPredicted RBP15.57■□□□□ 0.08
VRK3-219ENST00000600137 PDE4DIPQ5VU43 2346 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 TBX3O15119 743 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 LGR5O75473 907 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 LGALS2P05162 132 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 TCF7P36402 384 aaPredicted RBP15.56■□□□□ 0.08
VRK3-219ENST00000600137 TRAPPC10P48553 1259 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 SP4Q02446 784 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 ITGA7Q13683 1181 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 NBR1Q14596 966 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 BRDTQ58F21 947 aaPredicted RBP15.56■□□□□ 0.08
VRK3-219ENST00000600137 SPRYD3Q8NCJ5 442 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 PPP1R13LQ8WUF5 828 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 NAP1L4Q99733 375 aaKnown RBP15.56■□□□□ 0.08
VRK3-219ENST00000600137 STARD7Q9NQZ5 370 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 VAV3Q9UKW4 847 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 PCDHB6Q9Y5E3 794 aa15.56■□□□□ 0.08
VRK3-219ENST00000600137 DDX39AO00148 427 aaKnown RBP15.55■□□□□ 0.08
VRK3-219ENST00000600137 ARVCFO00192 962 aa15.55■□□□□ 0.08
VRK3-219ENST00000600137 STX6O43752 255 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms