RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 PLEKHG4Q58EX7 1191 aa24.48■■□□□ 1.51
PNKP-212ENST00000599454 FAM117BQ6P1L5 589 aa24.48■■□□□ 1.51
PNKP-212ENST00000599454 RALYLQ86SE5 291 aaKnown RBP24.48■■□□□ 1.51
PNKP-212ENST00000599454 DBF4BQ8NFT6 615 aa24.48■■□□□ 1.51
PNKP-212ENST00000599454 USP26Q9BXU7 913 aa24.48■■□□□ 1.51
PNKP-212ENST00000599454 MTUS1Q9ULD2 1270 aa24.48■■□□□ 1.51
PNKP-212ENST00000599454 XIRP2A4UGR9 3374 aa24.47■■□□□ 1.51
PNKP-212ENST00000599454 SMIM10L2AP0DMW4 78 aa24.47■■□□□ 1.51
PNKP-212ENST00000599454 SMIM10L2BP0DMW5 78 aa24.47■■□□□ 1.51
PNKP-212ENST00000599454 GNAT1P11488 350 aa24.47■■□□□ 1.51
PNKP-212ENST00000599454 HTRA4P83105 476 aaPredicted RBP24.47■■□□□ 1.51
PNKP-212ENST00000599454 TROAPQ12815 778 aa24.47■■□□□ 1.51
PNKP-212ENST00000599454 TTC22Q5TAA0 569 aa24.47■■□□□ 1.51
PNKP-212ENST00000599454 METTL7BQ6UX53 244 aa24.47■■□□□ 1.51
PNKP-212ENST00000599454 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.47■■□□□ 1.51
PNKP-212ENST00000599454 NCOA7Q8NI08 942 aa24.47■■□□□ 1.51
PNKP-212ENST00000599454 SP7Q8TDD2 431 aaPredicted RBP24.47■■□□□ 1.51
PNKP-212ENST00000599454 SEPT8Q92599 483 aa24.47■■□□□ 1.51
PNKP-212ENST00000599454 GPKOWQ92917 476 aaPredicted RBP eCLIP24.47■■□□□ 1.51
PNKP-212ENST00000599454 INPP4AQ96PE3 977 aaPredicted RBP24.47■■□□□ 1.51
PNKP-212ENST00000599454 RAPGEFL1Q9UHV5 662 aa24.47■■□□□ 1.51
PNKP-212ENST00000599454 COL4A6Q14031 1691 aa24.46■■□□□ 1.51
PNKP-212ENST00000599454 CATIPQ7Z7H3 387 aa24.46■■□□□ 1.51
PNKP-212ENST00000599454 MYOCDQ8IZQ8 938 aa24.46■■□□□ 1.51
PNKP-212ENST00000599454 FBXO22Q8NEZ5 403 aa24.46■■□□□ 1.51
PNKP-212ENST00000599454 SAMD11Q96NU1 681 aa24.46■■□□□ 1.51
PNKP-212ENST00000599454 RNPEPQ9H4A4 650 aa24.46■■□□□ 1.51
PNKP-212ENST00000599454 SPATA31C2B4DYI2 1134 aa24.45■■□□□ 1.5
PNKP-212ENST00000599454 FIBPO43427 364 aa24.45■■□□□ 1.5
PNKP-212ENST00000599454 GSPT1P15170 499 aaKnown RBP24.45■■□□□ 1.5
PNKP-212ENST00000599454 MRPS9P82933 396 aaKnown RBP24.45■■□□□ 1.5
PNKP-212ENST00000599454 ZFP91Q96JP5 570 aaPredicted RBP24.45■■□□□ 1.5
PNKP-212ENST00000599454 UBE2ZQ9H832 354 aaPredicted RBP24.45■■□□□ 1.5
PNKP-212ENST00000599454 ZNF215Q9UL58 517 aaPredicted RBP24.45■■□□□ 1.5
PNKP-212ENST00000599454 TREHO43280 583 aa24.44■■□□□ 1.5
PNKP-212ENST00000599454 PLA2G5P39877 138 aa24.44■■□□□ 1.5
PNKP-212ENST00000599454 XRRA1Q6P2D8 792 aa24.44■■□□□ 1.5
PNKP-212ENST00000599454 MAP3K14Q99558 947 aa24.44■■□□□ 1.5
PNKP-212ENST00000599454 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.43■■□□□ 1.5
PNKP-212ENST00000599454 E7EWF7 191 aa24.43■■□□□ 1.5
PNKP-212ENST00000599454 PTH1RQ03431 593 aa24.43■■□□□ 1.5
PNKP-212ENST00000599454 CYFIP1Q7L576 1253 aa24.43■■□□□ 1.5
PNKP-212ENST00000599454 GPR20Q99678 358 aa24.43■■□□□ 1.5
PNKP-212ENST00000599454 SENP7Q9BQF6 1050 aa24.43■■□□□ 1.5
PNKP-212ENST00000599454 C17orf80Q9BSJ5 609 aa24.43■■□□□ 1.5
PNKP-212ENST00000599454 EPHX3Q9H6B9 360 aa24.43■■□□□ 1.5
PNKP-212ENST00000599454 SENP2Q9HC62 589 aa24.43■■□□□ 1.5
PNKP-212ENST00000599454 CHMLP26374 656 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 PDE4AP27815 886 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 SEMA3FQ13275 785 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 PTPROQ16827 1216 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 LEXMQ3ZCV2 418 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 APBB2Q92870 758 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 CUL5Q93034 780 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 TOP1MTQ969P6 601 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 MRPL38Q96DV4 380 aaKnown RBP24.42■■□□□ 1.5
PNKP-212ENST00000599454 FAM122AQ96E09 287 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 SPZ1Q9BXG8 430 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 ARIH1Q9Y4X5 557 aaPredicted RBP24.42■■□□□ 1.5
PNKP-212ENST00000599454 MYO7AQ13402 2215 aa24.42■■□□□ 1.5
PNKP-212ENST00000599454 SMARCA1P28370 1054 aa24.41■■□□□ 1.5
PNKP-212ENST00000599454 PCNX4Q63HM2 1172 aa24.41■■□□□ 1.5
PNKP-212ENST00000599454 GIMAP8Q8ND71 665 aaPredicted RBP24.41■■□□□ 1.5
PNKP-212ENST00000599454 SMARCC2Q8TAQ2 1214 aa24.41■■□□□ 1.5
PNKP-212ENST00000599454 YME1L1Q96TA2 773 aa24.41■■□□□ 1.5
PNKP-212ENST00000599454 BCAS3Q9H6U6 928 aa24.41■■□□□ 1.5
PNKP-212ENST00000599454 SETD4Q9NVD3 440 aa24.41■■□□□ 1.5
PNKP-212ENST00000599454 PIK3CDO00329 1044 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 KIF5BP33176 963 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 EPC2Q52LR7 807 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 FAM26DQ5JW98 314 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 TMEM31Q5JXX7 168 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 NLRX1Q86UT6 975 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 CTCFLQ8NI51 663 aaPredicted RBP24.4■■□□□ 1.5
PNKP-212ENST00000599454 IGDCC4Q8TDY8 1250 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 RRP36Q96EU6 259 aaKnown RBP24.4■■□□□ 1.5
PNKP-212ENST00000599454 LZTS2Q9BRK4 669 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 MTA3Q9BTC8 594 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 LRFN3Q9BTN0 628 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 RTEL1Q9NZ71 1219 aa24.4■■□□□ 1.5
PNKP-212ENST00000599454 DDAH1O94760 285 aa24.39■■□□□ 1.49
PNKP-212ENST00000599454 CTSHP09668 335 aa24.39■■□□□ 1.49
PNKP-212ENST00000599454 ADAM17P78536 824 aa24.39■■□□□ 1.49
PNKP-212ENST00000599454 TIGD5Q53EQ6 642 aa24.39■■□□□ 1.49
PNKP-212ENST00000599454 MB21D2Q8IYB1 491 aaPredicted RBP24.39■■□□□ 1.49
PNKP-212ENST00000599454 SEC63Q9UGP8 760 aaKnown RBP24.39■■□□□ 1.49
PNKP-212ENST00000599454 HCN4Q9Y3Q4 1203 aa24.39■■□□□ 1.49
PNKP-212ENST00000599454 NRCAMQ92823 1304 aa24.38■■□□□ 1.49
PNKP-212ENST00000599454 SGSM2O43147 1006 aa24.38■■□□□ 1.49
PNKP-212ENST00000599454 ANTXR2P58335 489 aa24.38■■□□□ 1.49
PNKP-212ENST00000599454 PUS10Q3MIT2 529 aaKnown RBP24.38■■□□□ 1.49
PNKP-212ENST00000599454 LMBR1Q8WVP7 490 aa24.38■■□□□ 1.49
PNKP-212ENST00000599454 PIBF1Q8WXW3 757 aa24.38■■□□□ 1.49
PNKP-212ENST00000599454 TAF6LQ9Y6J9 622 aa24.38■■□□□ 1.49
PNKP-212ENST00000599454 TTC3P53804 2025 aa24.38■■□□□ 1.49
PNKP-212ENST00000599454 ATG2AQ2TAZ0 1938 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 LOC101059915A0A1B0GWI6 518 aaPredicted RBP24.37■■□□□ 1.49
PNKP-212ENST00000599454 H3BNC9 293 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 GPR37L1O60883 481 aa24.37■■□□□ 1.49
PNKP-212ENST00000599454 KCNA5P22460 613 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms