RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 STK17AQ9UEE5 414 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 INO80B-WBP1J3KQ70 363 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 NR1D1P20393 614 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 PTPREP23469 700 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 CLCN6P51797 869 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 HIBCHQ6NVY1 386 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 ZBTB38Q8NAP3 1195 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 INO80BQ9C086 356 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 GINM1Q9NU53 330 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 RASGRF2O14827 1237 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 CD58P19256 250 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 TFAMQ00059 246 aaKnown RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 BBS9Q3SYG4 887 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 BBS5Q8N3I7 341 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 RMDN2Q96LZ7 410 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 GREM2Q9H772 168 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 SCHIP1Q9P0W5 487 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 PACSIN2Q9UNF0 486 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 ARHGEF10O15013 1369 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 ABCC12Q96J65 1359 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 A0A087WUV0 522 aaPredicted RBP12.79□□□□□ -0.36
SCN8A-208ENST00000599343 OSTNP61366 133 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 ANGPTL2Q9UKU9 493 aa12.79□□□□□ -0.36
SCN8A-208ENST00000599343 ESRRAP11474 423 aaPredicted RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 ATP2B4P23634 1241 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 DYNLL1P63167 89 aaKnown RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 OR6B2Q6IFH4 312 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 SCARA5Q6ZMJ2 495 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 TBCKQ8TEA7 893 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 PBKQ96KB5 322 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 ABCB6Q9NP58 842 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 EIF4G3O43432 1585 aaKnown RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 ARL4AP40617 200 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 GYS2P54840 703 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 DR1Q01658 176 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 ZNF589Q86UQ0 364 aaPredicted RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 NSUN7Q8NE18 718 aaKnown RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 CUEDC2Q9H467 287 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 TRAPPC8Q9Y2L5 1435 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 IKBKBO14920 756 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 GAP43P17677 238 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 DDIT3P35638 169 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 ARPP19P56211 112 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 TRIM67Q6ZTA4 783 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 ALKBH8Q96BT7 664 aaKnown RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 CEP19Q96LK0 163 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 ZMYND12Q9H0C1 365 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 CNOT10Q9H9A5 744 aaKnown RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 SUCLA2Q9P2R7 463 aaPredicted RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 KIAA0232Q92628 1395 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 LAD1O00515 517 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 ACSL3O95573 720 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 GRAMD1BQ3KR37 738 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 TBC1D1Q86TI0 1168 aaPredicted RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 FBXL13Q8NEE6 735 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 TRAIPQ9BWF2 469 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 AMNQ9BXJ7 453 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 BCS1LQ9Y276 419 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 ATICP31939 592 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 CYP27A1Q02318 531 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 HABP4Q5JVS0 413 aaKnown RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 CCDC124Q96CT7 223 aaKnown RBP12.78□□□□□ -0.36
SCN8A-208ENST00000599343 BEGAINQ9BUH8 593 aa12.78□□□□□ -0.36
SCN8A-208ENST00000599343 UHRF1BP1Q6BDS2 1440 aa12.77□□□□□ -0.36
SCN8A-208ENST00000599343 SOS2Q07890 1332 aaPredicted RBP12.77□□□□□ -0.36
SCN8A-208ENST00000599343 CLRN2A0PK11 232 aa12.77□□□□□ -0.36
SCN8A-208ENST00000599343 NR5A1Q13285 461 aa12.77□□□□□ -0.36
SCN8A-208ENST00000599343 APOA5Q6Q788 366 aa12.77□□□□□ -0.36
SCN8A-208ENST00000599343 NEK9Q8TD19 979 aa12.77□□□□□ -0.36
SCN8A-208ENST00000599343 NUDCD1Q96RS6 583 aa12.77□□□□□ -0.36
SCN8A-208ENST00000599343 PIGSQ96S52 555 aa12.77□□□□□ -0.36
SCN8A-208ENST00000599343 FOSP01100 380 aaPredicted RBP12.77□□□□□ -0.36
SCN8A-208ENST00000599343 ZWILCHQ9H900 591 aa12.77□□□□□ -0.36
SCN8A-208ENST00000599343 APBA3O96018 575 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 SKIP12755 728 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 YWHAHQ04917 246 aaPredicted RBP12.77□□□□□ -0.37
SCN8A-208ENST00000599343 CASP8Q14790 479 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 FAM135BQ49AJ0 1406 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 HSPH1Q92598 858 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 MAP4K1Q92918 833 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 POLR3EQ9NVU0 708 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 NFU1Q9UMS0 254 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 TYW5A2RUC4 315 aaKnown RBP12.77□□□□□ -0.37
SCN8A-208ENST00000599343 TTI1O43156 1089 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 SOX5P35711 763 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 SLMAPQ14BN4 828 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 ATG16L1Q676U5 607 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 RETREG2Q8NC44 543 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 COA7Q96BR5 231 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 RWDD2AQ9UIY3 292 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 SLC4A7Q9Y6M7 1214 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 ZNF518AQ6AHZ1 1483 aa12.77□□□□□ -0.37
SCN8A-208ENST00000599343 ANKRD65E5RJM6 399 aa12.76□□□□□ -0.37
SCN8A-208ENST00000599343 SERPING1P05155 500 aa12.76□□□□□ -0.37
SCN8A-208ENST00000599343 SULF1Q8IWU6 871 aa12.76□□□□□ -0.37
SCN8A-208ENST00000599343 SPATA17Q96L03 361 aa12.76□□□□□ -0.37
SCN8A-208ENST00000599343 FMO2Q99518 471 aa12.76□□□□□ -0.37
SCN8A-208ENST00000599343 TADA3O75528 432 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms