RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 KIF5BP33176 963 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 TROAPQ12815 778 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 MBTPS1Q14703 1052 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 TTC22Q5TAA0 569 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 FAM117BQ6P1L5 589 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 MYOCDQ8IZQ8 938 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 FBXO22Q8NEZ5 403 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 DBF4BQ8NFT6 615 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 IL31RAQ8NI17 732 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 APBB2Q92870 758 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 INPP4AQ96PE3 977 aaPredicted RBP19.64■□□□□ 0.73
PNKP-210ENST00000597965 MAP3K14Q99558 947 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 ARIH1Q9Y4X5 557 aaPredicted RBP19.64■□□□□ 0.73
PNKP-210ENST00000597965 FRMPD4Q14CM0 1322 aa19.64■□□□□ 0.73
PNKP-210ENST00000597965 SORBS3O60504 671 aa19.63■□□□□ 0.73
PNKP-210ENST00000597965 CYP21A2P08686 494 aa19.63■□□□□ 0.73
PNKP-210ENST00000597965 HTRA4P83105 476 aaPredicted RBP19.63■□□□□ 0.73
PNKP-210ENST00000597965 CTCFLQ8NI51 663 aaPredicted RBP19.63■□□□□ 0.73
PNKP-210ENST00000597965 EXOC6Q8TAG9 804 aa19.63■□□□□ 0.73
PNKP-210ENST00000597965 WNT8BQ93098 351 aa19.63■□□□□ 0.73
PNKP-210ENST00000597965 FAM122AQ96E09 287 aa19.63■□□□□ 0.73
PNKP-210ENST00000597965 SENP7Q9BQF6 1050 aa19.63■□□□□ 0.73
PNKP-210ENST00000597965 LZTS2Q9BRK4 669 aa19.63■□□□□ 0.73
PNKP-210ENST00000597965 RNPEPQ9H4A4 650 aa19.63■□□□□ 0.73
PNKP-210ENST00000597965 SEC63Q9UGP8 760 aaKnown RBP19.63■□□□□ 0.73
PNKP-210ENST00000597965 HCN4Q9Y3Q4 1203 aa19.63■□□□□ 0.73
PNKP-210ENST00000597965 MICAL3Q7RTP6 2002 aa19.63■□□□□ 0.73
PNKP-210ENST00000597965 BAZ2BQ9UIF8 2168 aaKnown RBP19.62■□□□□ 0.73
PNKP-210ENST00000597965 SPATA31C2B4DYI2 1134 aa19.62■□□□□ 0.73
PNKP-210ENST00000597965 CYTH3O43739 400 aa19.62■□□□□ 0.73
PNKP-210ENST00000597965 SMARCA1P28370 1054 aa19.62■□□□□ 0.73
PNKP-210ENST00000597965 PUS10Q3MIT2 529 aaKnown RBP19.62■□□□□ 0.73
PNKP-210ENST00000597965 NLRX1Q86UT6 975 aa19.62■□□□□ 0.73
PNKP-210ENST00000597965 SMARCC2Q8TAQ2 1214 aa19.62■□□□□ 0.73
PNKP-210ENST00000597965 SP7Q8TDD2 431 aaPredicted RBP19.62■□□□□ 0.73
PNKP-210ENST00000597965 RRP36Q96EU6 259 aaKnown RBP19.62■□□□□ 0.73
PNKP-210ENST00000597965 CDHR1Q96JP9 859 aa19.62■□□□□ 0.73
PNKP-210ENST00000597965 YME1L1Q96TA2 773 aa19.62■□□□□ 0.73
PNKP-210ENST00000597965 MTA3Q9BTC8 594 aa19.62■□□□□ 0.73
PNKP-210ENST00000597965 UBE2ZQ9H832 354 aaPredicted RBP19.62■□□□□ 0.73
PNKP-210ENST00000597965 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.61■□□□□ 0.73
PNKP-210ENST00000597965 E7EWF7 191 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 TREHO43280 583 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 PLA2G5P39877 138 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 GNAQP50148 359 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 TCTN1Q2MV58 587 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 TIGD5Q53EQ6 642 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 TMEM31Q5JXX7 168 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 PCNX4Q63HM2 1172 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.61■□□□□ 0.73
PNKP-210ENST00000597965 CYFIP1Q7L576 1253 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 SPRED2Q7Z698 418 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 TMTC2Q8N394 836 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 TOP1MTQ969P6 601 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 MRPL38Q96DV4 380 aaKnown RBP19.61■□□□□ 0.73
PNKP-210ENST00000597965 GPR20Q99678 358 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 SPZ1Q9BXG8 430 aa19.61■□□□□ 0.73
PNKP-210ENST00000597965 NRCAMQ92823 1304 aa19.6■□□□□ 0.73
PNKP-210ENST00000597965 PIK3CDO00329 1044 aa19.6■□□□□ 0.73
PNKP-210ENST00000597965 DDAH1O94760 285 aa19.6■□□□□ 0.73
PNKP-210ENST00000597965 MRPS9P82933 396 aaKnown RBP19.6■□□□□ 0.73
PNKP-210ENST00000597965 MKRN4PQ13434 485 aaPredicted RBP19.6■□□□□ 0.73
PNKP-210ENST00000597965 HIC1Q14526 733 aa19.6■□□□□ 0.73
PNKP-210ENST00000597965 LEXMQ3ZCV2 418 aa19.6■□□□□ 0.73
PNKP-210ENST00000597965 RSPH3Q86UC2 560 aa19.6■□□□□ 0.73
PNKP-210ENST00000597965 IL25Q9H293 177 aa19.6■□□□□ 0.73
PNKP-210ENST00000597965 RPLP2P05387 115 aaKnown RBP19.59■□□□□ 0.73
PNKP-210ENST00000597965 GSPT1P15170 499 aaKnown RBP19.59■□□□□ 0.73
PNKP-210ENST00000597965 CHMLP26374 656 aa19.59■□□□□ 0.73
PNKP-210ENST00000597965 TAF2Q6P1X5 1199 aa19.59■□□□□ 0.73
PNKP-210ENST00000597965 CASC1Q6TDU7 716 aa19.59■□□□□ 0.73
PNKP-210ENST00000597965 GPKOWQ92917 476 aaPredicted RBP eCLIP19.59■□□□□ 0.73
PNKP-210ENST00000597965 C17orf80Q9BSJ5 609 aa19.59■□□□□ 0.73
PNKP-210ENST00000597965 SETD4Q9NVD3 440 aa19.59■□□□□ 0.73
PNKP-210ENST00000597965 RTEL1Q9NZ71 1219 aa19.59■□□□□ 0.73
PNKP-210ENST00000597965 FAM50BQ9Y247 325 aa19.59■□□□□ 0.73
PNKP-210ENST00000597965 KAT6AQ92794 2004 aa19.59■□□□□ 0.73
PNKP-210ENST00000597965 COL4A6Q14031 1691 aa19.59■□□□□ 0.73
PNKP-210ENST00000597965 BRWD1Q9NSI6 2320 aa19.58■□□□□ 0.73
PNKP-210ENST00000597965 CTSHP09668 335 aa19.58■□□□□ 0.72
PNKP-210ENST00000597965 PTH1RQ03431 593 aa19.58■□□□□ 0.72
PNKP-210ENST00000597965 EPC2Q52LR7 807 aa19.58■□□□□ 0.72
PNKP-210ENST00000597965 IGDCC4Q8TDY8 1250 aa19.58■□□□□ 0.72
PNKP-210ENST00000597965 TNPO1Q92973 898 aaKnown RBP19.58■□□□□ 0.72
PNKP-210ENST00000597965 ZFP91Q96JP5 570 aaPredicted RBP19.58■□□□□ 0.72
PNKP-210ENST00000597965 IFIH1Q9BYX4 1025 aaKnown RBP19.58■□□□□ 0.72
PNKP-210ENST00000597965 RWDD3Q9Y3V2 267 aa19.58■□□□□ 0.72
PNKP-210ENST00000597965 H3BNC9 293 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 NCK2O43639 380 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 GPR37L1O60883 481 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 CALM1P0DP23 149 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 CALM2P0DP24 149 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 CALM3P0DP25 149 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 KCNA5P22460 613 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 ARHGAP4P98171 946 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 SLC35G1Q2M3R5 365 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 FAM26DQ5JW98 314 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 RPAINQ86UA6 219 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 GPRASP2Q96D09 838 aa19.57■□□□□ 0.72
PNKP-210ENST00000597965 LRFN3Q9BTN0 628 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms