RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 CELF3Q5SZQ8 465 aaKnown RBP10.52□□□□□ -0.73
ZNF548-206ENST00000597047 LRCH2Q5VUJ6 765 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 NCAPH2Q6IBW4 605 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 PPP4R3AQ6IN85 833 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 PPP1R13LQ8WUF5 828 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 AFG1LQ8WV93 481 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 CRYGNQ8WXF5 182 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 FERMT2Q96AC1 680 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 CHAMP1Q96JM3 812 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 ZNF396Q96N95 335 aaPredicted RBP10.52□□□□□ -0.73
ZNF548-206ENST00000597047 TEKT3Q9BXF9 490 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 FTOQ9C0B1 505 aaKnown RBP eCLIP10.52□□□□□ -0.73
ZNF548-206ENST00000597047 TMEM60Q9H2L4 133 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 TELO2Q9Y4R8 837 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 CLIC4Q9Y696 253 aa10.52□□□□□ -0.73
ZNF548-206ENST00000597047 CYP3A7-CYP3A51PA0A087WV96 503 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 MYADML2A6NDP7 307 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 KBTBD13C9JR72 458 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 BACH1O14867 736 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 NKRFO15226 690 aaKnown RBP eCLIP10.51□□□□□ -0.73
ZNF548-206ENST00000597047 MAFGO15525 162 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 MSCO60682 206 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 SGPL1O95470 568 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 BRD1O95696 1058 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 IGHA2P01877 340 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 TGFB3P10600 412 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 KCNA2P16389 499 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 EN2P19622 333 aaPredicted RBP10.51□□□□□ -0.73
ZNF548-206ENST00000597047 CYP3A7P24462 503 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 ICAM3P32942 547 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 TECP42680 631 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 PTGDRQ13258 359 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 STK38Q15208 465 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 SF3A1Q15459 793 aaKnown RBP10.51□□□□□ -0.73
ZNF548-206ENST00000597047 ZRSR1Q15695 479 aaKnown RBP10.51□□□□□ -0.73
ZNF548-206ENST00000597047 KCNA10Q16322 511 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 FSCN1Q16658 493 aaKnown RBP10.51□□□□□ -0.73
ZNF548-206ENST00000597047 BRDTQ58F21 947 aaPredicted RBP10.51□□□□□ -0.73
ZNF548-206ENST00000597047 LHX8Q68G74 356 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 CCDC62Q6P9F0 684 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 NIPA1Q7RTP0 329 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 RNF180Q86T96 592 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 ARRDC4Q8NCT1 418 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 GIMAP8Q8ND71 665 aaPredicted RBP10.51□□□□□ -0.73
ZNF548-206ENST00000597047 U2AF1L4Q8WU68 220 aaKnown RBP10.51□□□□□ -0.73
ZNF548-206ENST00000597047 SLC9A2Q9UBY0 812 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 GNEQ9Y223 722 aaKnown RBP10.51□□□□□ -0.73
ZNF548-206ENST00000597047 ZDHHC9Q9Y397 364 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 SYNRGQ9UMZ2 1314 aa10.51□□□□□ -0.73
ZNF548-206ENST00000597047 POTEFA5A3E0 1075 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 ZEB2O60315 1214 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 GJB1P08034 283 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 OR52Z1P0C646 297 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 PDIA4P13667 645 aaKnown RBP10.5□□□□□ -0.73
ZNF548-206ENST00000597047 MARCKSP29966 332 aaPredicted RBP10.5□□□□□ -0.73
ZNF548-206ENST00000597047 TRAPPC10P48553 1259 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 CPT1AP50416 773 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 DNM1Q05193 864 aaKnown RBP10.5□□□□□ -0.73
ZNF548-206ENST00000597047 ARHGAP1Q07960 439 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 LRRC41Q15345 812 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 HSDL1Q3SXM5 330 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 MOXD1Q6UVY6 613 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 MIER3Q7Z3K6 550 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 SLFN12Q8IYM2 578 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 LENG9Q96B70 501 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 USP28Q96RU2 1077 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 UNC45AQ9H3U1 944 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 TTC12Q9H892 705 aaPredicted RBP10.5□□□□□ -0.73
ZNF548-206ENST00000597047 JPH1Q9HDC5 661 aaPredicted RBP10.5□□□□□ -0.73
ZNF548-206ENST00000597047 PAK6Q9NQU5 681 aaPredicted RBP10.5□□□□□ -0.73
ZNF548-206ENST00000597047 TBC1D22BQ9NU19 505 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 CHMP5Q9NZZ3 219 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 PCDHA12Q9UN75 941 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 CEP131Q9UPN4 1083 aa10.5□□□□□ -0.73
ZNF548-206ENST00000597047 VWA3AA6NCI4 1184 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 FARP2O94887 1054 aaPredicted RBP10.49□□□□□ -0.73
ZNF548-206ENST00000597047 MMP3P08254 477 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 ZNF286BP0CG31 522 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 MARK3P27448 753 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 TCF7P36402 384 aaPredicted RBP10.49□□□□□ -0.73
ZNF548-206ENST00000597047 GJA9P57773 515 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 ACTR2P61160 394 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 TMEM266Q2M3C6 531 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 FAM47CQ5HY64 1035 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 SWSAP1Q6NVH7 229 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 METTL7BQ6UX53 244 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 CXCL17Q6UXB2 119 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 DTHD1Q6ZMT9 781 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 CKAP2LQ8IYA6 745 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 ETNPPLQ8TBG4 499 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 SEPT1Q8WYJ6 367 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 HAS1Q92839 578 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 GLG1Q92896 1179 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 SLC5A5Q92911 643 aa10.49□□□□□ -0.73
ZNF548-206ENST00000597047 SENP6Q9GZR1 1112 aaPredicted RBP10.49□□□□□ -0.73
ZNF548-206ENST00000597047 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.49□□□□□ -0.73
ZNF548-206ENST00000597047 GSTTP1A0A1W2PQM5 241 aa10.48□□□□□ -0.73
ZNF548-206ENST00000597047 DHX15O43143 795 aaKnown RBP10.48□□□□□ -0.73
ZNF548-206ENST00000597047 ADAMTS4O75173 837 aa10.48□□□□□ -0.73
ZNF548-206ENST00000597047 CCNE2O96020 404 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms