RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PSEN2P49810 448 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 ARHGAP4P98171 946 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 CEP55Q53EZ4 464 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 FAM47CQ5HY64 1035 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 MFSD5Q6N075 450 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 FAM177A1Q8N128 213 aaPredicted RBP24.08■■□□□ 1.45
PNKP-209ENST00000596726 CYP2W1Q8TAV3 490 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 C16orf70Q9BSU1 422 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 KATNAL1Q9BW62 490 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 TELO2Q9Y4R8 837 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 STK36Q9NRP7 1315 aa24.08■■□□□ 1.44
PNKP-209ENST00000596726 MFSD10Q14728 455 aa24.07■■□□□ 1.44
PNKP-209ENST00000596726 AIFM3Q96NN9 605 aa24.07■■□□□ 1.44
PNKP-209ENST00000596726 NOC4LQ9BVI4 516 aaKnown RBP24.07■■□□□ 1.44
PNKP-209ENST00000596726 KCNH7Q9NS40 1196 aa24.07■■□□□ 1.44
PNKP-209ENST00000596726 TRIP12Q14669 1992 aaPredicted RBP24.06■■□□□ 1.44
PNKP-209ENST00000596726 MEIS1O00470 390 aa24.06■■□□□ 1.44
PNKP-209ENST00000596726 NOP56O00567 594 aaKnown RBP24.06■■□□□ 1.44
PNKP-209ENST00000596726 RBM25P49756 843 aaKnown RBP24.06■■□□□ 1.44
PNKP-209ENST00000596726 NLRP5P59047 1200 aa24.06■■□□□ 1.44
PNKP-209ENST00000596726 NIPA1Q7RTP0 329 aa24.06■■□□□ 1.44
PNKP-209ENST00000596726 NECAB1Q8N987 351 aa24.06■■□□□ 1.44
PNKP-209ENST00000596726 RASGRP4Q8TDF6 673 aa24.06■■□□□ 1.44
PNKP-209ENST00000596726 GTF3C6Q969F1 213 aa24.06■■□□□ 1.44
PNKP-209ENST00000596726 C22orf23Q9BZE7 217 aa24.06■■□□□ 1.44
PNKP-209ENST00000596726 PPP1R12CQ9BZL4 782 aa24.06■■□□□ 1.44
PNKP-209ENST00000596726 HIPK3Q9H422 1215 aa24.06■■□□□ 1.44
PNKP-209ENST00000596726 LAMA3Q16787 3333 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 LGALS2P05162 132 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 ARP10275 920 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 CYP2C18P33260 490 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 EPHB4P54760 987 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 CHMP4BP1P59074 171 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 FPGSQ05932 587 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 NPY5RQ15761 445 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 KIAA0753Q2KHM9 967 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 LRIT3Q3SXY7 679 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 ALG1Q9BT22 464 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 GTF2IRD1Q9UHL9 959 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 UMODL1Q5DID0 1318 aa24.05■■□□□ 1.44
PNKP-209ENST00000596726 M0R2N6 131 aa24.04■■□□□ 1.44
PNKP-209ENST00000596726 CYP2C9P11712 490 aa24.04■■□□□ 1.44
PNKP-209ENST00000596726 GDF6Q6KF10 455 aaPredicted RBP24.04■■□□□ 1.44
PNKP-209ENST00000596726 DAGLBQ8NCG7 672 aa24.04■■□□□ 1.44
PNKP-209ENST00000596726 CTAGE1Q96RT6 745 aa24.04■■□□□ 1.44
PNKP-209ENST00000596726 HDAC6Q9UBN7 1215 aa24.04■■□□□ 1.44
PNKP-209ENST00000596726 PCDHA4Q9UN74 947 aa24.04■■□□□ 1.44
PNKP-209ENST00000596726 IGLV3-22A0A075B6J6 115 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 FAM86B1E9PN63 330 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 H3BRB1 525 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 EDIL3O43854 480 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 FAM86B2P0C5J1 330 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 ZNF76P36508 570 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 SHHQ15465 462 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 C9orf50Q5SZB4 431 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 GALNT17Q6IS24 598 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 TMEM199Q8N511 208 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 TUT1Q9H6E5 874 aaKnown RBP24.03■■□□□ 1.44
PNKP-209ENST00000596726 AGO4Q9HCK5 861 aaKnown RBP24.03■■□□□ 1.44
PNKP-209ENST00000596726 PKD2L1Q9P0L9 805 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 NFASCO94856 1347 aa24.03■■□□□ 1.44
PNKP-209ENST00000596726 LAMA2P24043 3122 aaKnown RBP24.03■■□□□ 1.44
PNKP-209ENST00000596726 GSTTP1A0A1W2PQM5 241 aa24.02■■□□□ 1.44
PNKP-209ENST00000596726 DTNBO60941 627 aa24.02■■□□□ 1.44
PNKP-209ENST00000596726 FDPSP14324 419 aaKnown RBP24.02■■□□□ 1.44
PNKP-209ENST00000596726 CIITAP33076 1130 aa24.02■■□□□ 1.44
PNKP-209ENST00000596726 BLIDQ8IZY5 108 aa24.02■■□□□ 1.44
PNKP-209ENST00000596726 C7orf31Q8N865 590 aa24.02■■□□□ 1.44
PNKP-209ENST00000596726 SEPT1Q8WYJ6 367 aa24.02■■□□□ 1.44
PNKP-209ENST00000596726 WNT8AQ9H1J5 351 aa24.02■■□□□ 1.44
PNKP-209ENST00000596726 ORC3Q9UBD5 711 aaPredicted RBP24.02■■□□□ 1.44
PNKP-209ENST00000596726 SOX1O00570 391 aaPredicted RBP24.01■■□□□ 1.43
PNKP-209ENST00000596726 CSF2RAP15509 400 aa24.01■■□□□ 1.43
PNKP-209ENST00000596726 SP4Q02446 784 aa24.01■■□□□ 1.43
PNKP-209ENST00000596726 ST3GAL1Q11201 340 aa24.01■■□□□ 1.43
PNKP-209ENST00000596726 ITGB3BPQ13352 177 aaPredicted RBP24.01■■□□□ 1.43
PNKP-209ENST00000596726 PPIGQ13427 754 aaKnown RBP eCLIP24.01■■□□□ 1.431e-7■■■■□ 20.2
PNKP-209ENST00000596726 PTGISQ16647 500 aa24.01■■□□□ 1.43
PNKP-209ENST00000596726 NSUN7Q8NE18 718 aaKnown RBP24.01■■□□□ 1.43
PNKP-209ENST00000596726 PHF20Q9BVI0 1012 aa24.01■■□□□ 1.43
PNKP-209ENST00000596726 LIMCH1Q9UPQ0 1083 aa24.01■■□□□ 1.43
PNKP-209ENST00000596726 KAT6AQ92794 2004 aa24.01■■□□□ 1.43
PNKP-209ENST00000596726 HOXC8P31273 242 aa24■■□□□ 1.43
PNKP-209ENST00000596726 TCF7P36402 384 aaPredicted RBP24■■□□□ 1.43
PNKP-209ENST00000596726 CCL23P55773 120 aa24■■□□□ 1.43
PNKP-209ENST00000596726 HIC1Q14526 733 aa24■■□□□ 1.43
PNKP-209ENST00000596726 C16orf59Q7L2K0 433 aa24■■□□□ 1.43
PNKP-209ENST00000596726 PLA2G4DQ86XP0 818 aa24■■□□□ 1.43
PNKP-209ENST00000596726 JPH1Q9HDC5 661 aaPredicted RBP24■■□□□ 1.43
PNKP-209ENST00000596726 SLC9A2Q9UBY0 812 aa24■■□□□ 1.43
PNKP-209ENST00000596726 KCNJ14Q9UNX9 436 aa24■■□□□ 1.43
PNKP-209ENST00000596726 SCN5AQ14524 2016 aa24■■□□□ 1.43
PNKP-209ENST00000596726 TANC1Q9C0D5 1861 aa23.99■■□□□ 1.43
PNKP-209ENST00000596726 PITPNM1O00562 1244 aa23.99■■□□□ 1.43
PNKP-209ENST00000596726 USP11P51784 963 aa23.99■■□□□ 1.43
PNKP-209ENST00000596726 UTP14CQ5TAP6 766 aaKnown RBP23.99■■□□□ 1.43
PNKP-209ENST00000596726 TRIM50Q86XT4 487 aa23.99■■□□□ 1.43
PNKP-209ENST00000596726 SDF4Q9BRK5 362 aa23.99■■□□□ 1.43
PNKP-209ENST00000596726 NOD1Q9Y239 953 aa23.99■■□□□ 1.43
PNKP-209ENST00000596726 DHX15O43143 795 aaKnown RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms