RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 GJB5O95377 273 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 SMIM10L2AP0DMW4 78 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 SMIM10L2BP0DMW5 78 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 IKBKEQ14164 716 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 SART3Q15020 963 aaKnown RBP18.59■□□□□ 0.57
LIM2-202ENST00000596399 SERINC5Q86VE9 423 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 TRIM50Q86XT4 487 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 DBF4BQ8NFT6 615 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 ATP6V0A1Q93050 837 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 RNPEPQ9H4A4 650 aa18.59■□□□□ 0.57
LIM2-202ENST00000596399 TUT1Q9H6E5 874 aaKnown RBP18.59■□□□□ 0.57
LIM2-202ENST00000596399 FRMPD4Q14CM0 1322 aa18.58■□□□□ 0.57
LIM2-202ENST00000596399 C17orf102A2RUQ5 167 aa18.58■□□□□ 0.56
LIM2-202ENST00000596399 LINC01553A4QN01 128 aa18.58■□□□□ 0.56
LIM2-202ENST00000596399 RSPH10B2B2RC85 870 aa18.58■□□□□ 0.56
LIM2-202ENST00000596399 SPATA31C2B4DYI2 1134 aa18.58■□□□□ 0.56
LIM2-202ENST00000596399 LGR5O75473 907 aa18.58■□□□□ 0.56
LIM2-202ENST00000596399 PARNO95453 639 aaKnown RBP18.58■□□□□ 0.56
LIM2-202ENST00000596399 RSPH10BP0C881 870 aa18.58■□□□□ 0.56
LIM2-202ENST00000596399 SP4Q02446 784 aa18.58■□□□□ 0.56
LIM2-202ENST00000596399 RAB11FIP4Q86YS3 637 aa18.58■□□□□ 0.56
LIM2-202ENST00000596399 ZNF654Q8IZM8 581 aa18.58■□□□□ 0.56
LIM2-202ENST00000596399 INPP4AQ96PE3 977 aaPredicted RBP18.58■□□□□ 0.56
LIM2-202ENST00000596399 RAD9AQ99638 391 aa18.58■□□□□ 0.56
LIM2-202ENST00000596399 PLEKHA8P1O95397 391 aa18.57■□□□□ 0.56
LIM2-202ENST00000596399 CTSHP09668 335 aa18.57■□□□□ 0.56
LIM2-202ENST00000596399 RXRAP19793 462 aa18.57■□□□□ 0.56
LIM2-202ENST00000596399 HOXC8P31273 242 aa18.57■□□□□ 0.56
LIM2-202ENST00000596399 GPR20Q99678 358 aa18.57■□□□□ 0.56
LIM2-202ENST00000596399 SUGCTQ9HAC7 445 aa18.57■□□□□ 0.56
LIM2-202ENST00000596399 SETD4Q9NVD3 440 aa18.57■□□□□ 0.56
LIM2-202ENST00000596399 hCG_1642624A0A1W2PR95 340 aa18.56■□□□□ 0.56
LIM2-202ENST00000596399 NOP56O00567 594 aaKnown RBP18.56■□□□□ 0.56
LIM2-202ENST00000596399 MEIS2O14770 477 aa18.56■□□□□ 0.56
LIM2-202ENST00000596399 PRC1O43663 620 aa18.56■□□□□ 0.56
LIM2-202ENST00000596399 COL9A1P20849 921 aa18.56■□□□□ 0.56
LIM2-202ENST00000596399 ICAM3P32942 547 aa18.56■□□□□ 0.56
LIM2-202ENST00000596399 TRAF1Q13077 416 aa18.56■□□□□ 0.56
LIM2-202ENST00000596399 MKRN4PQ13434 485 aaPredicted RBP18.56■□□□□ 0.56
LIM2-202ENST00000596399 UTP14CQ5TAP6 766 aaKnown RBP18.56■□□□□ 0.56
LIM2-202ENST00000596399 SRBD1Q8N5C6 995 aaKnown RBP18.56■□□□□ 0.56
LIM2-202ENST00000596399 SMARCC2Q8TAQ2 1214 aa18.56■□□□□ 0.56
LIM2-202ENST00000596399 C17orf80Q9BSJ5 609 aa18.56■□□□□ 0.56
LIM2-202ENST00000596399 SPZ1Q9BXG8 430 aa18.56■□□□□ 0.56
LIM2-202ENST00000596399 ERVK-21P61565 698 aa18.55■□□□□ 0.56
LIM2-202ENST00000596399 GNPTABQ3T906 1256 aa18.55■□□□□ 0.56
LIM2-202ENST00000596399 METTL7BQ6UX53 244 aa18.55■□□□□ 0.56
LIM2-202ENST00000596399 MYOCDQ8IZQ8 938 aa18.55■□□□□ 0.56
LIM2-202ENST00000596399 CTCFLQ8NI51 663 aaPredicted RBP18.55■□□□□ 0.56
LIM2-202ENST00000596399 HLA-CQ95604 372 aa18.55■□□□□ 0.56
LIM2-202ENST00000596399 RRP36Q96EU6 259 aaKnown RBP18.55■□□□□ 0.56
LIM2-202ENST00000596399 LRRC2Q9BYS8 371 aa18.55■□□□□ 0.56
LIM2-202ENST00000596399 FIBPO43427 364 aa18.54■□□□□ 0.56
LIM2-202ENST00000596399 NEDD9Q14511 834 aa18.54■□□□□ 0.56
LIM2-202ENST00000596399 AAK1Q2M2I8 961 aa18.54■□□□□ 0.56
LIM2-202ENST00000596399 PLEKHG4Q58EX7 1191 aa18.54■□□□□ 0.56
LIM2-202ENST00000596399 NFXL1Q6ZNB6 911 aa18.54■□□□□ 0.56
LIM2-202ENST00000596399 CCDC82Q8N4S0 544 aa18.54■□□□□ 0.56
LIM2-202ENST00000596399 TGS1Q96RS0 853 aaKnown RBP18.54■□□□□ 0.56
LIM2-202ENST00000596399 USP26Q9BXU7 913 aa18.54■□□□□ 0.56
LIM2-202ENST00000596399 LSG1Q9H089 658 aaKnown RBP18.54■□□□□ 0.56
LIM2-202ENST00000596399 EMSYQ7Z589 1322 aa18.53■□□□□ 0.56
LIM2-202ENST00000596399 SH2B2O14492 632 aaPredicted RBP18.53■□□□□ 0.56
LIM2-202ENST00000596399 EFCAB14O75071 495 aa18.53■□□□□ 0.56
LIM2-202ENST00000596399 ATP9AO75110 1047 aa18.53■□□□□ 0.56
LIM2-202ENST00000596399 DDAH1O94760 285 aa18.53■□□□□ 0.56
LIM2-202ENST00000596399 PCNX4Q63HM2 1172 aa18.53■□□□□ 0.56
LIM2-202ENST00000596399 CASC1Q6TDU7 716 aa18.53■□□□□ 0.56
LIM2-202ENST00000596399 SKAP1Q86WV1 359 aa18.53■□□□□ 0.56
LIM2-202ENST00000596399 MAP3K14Q99558 947 aa18.53■□□□□ 0.56
LIM2-202ENST00000596399 PKD2L1Q9P0L9 805 aa18.53■□□□□ 0.56
LIM2-202ENST00000596399 COG5Q9UP83 839 aa18.53■□□□□ 0.56
LIM2-202ENST00000596399 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.52■□□□□ 0.56
LIM2-202ENST00000596399 PIK3CDO00329 1044 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 SLC27A2O14975 620 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 STAM2O75886 525 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 UPP2O95045 317 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 AMHP03971 560 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 KIF5BP33176 963 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 ADAM17P78536 824 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 ARHGAP4P98171 946 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 UBE2SQ16763 222 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 LMBR1Q8WVP7 490 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 CUL5Q93034 780 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
LIM2-202ENST00000596399 INSL6Q9Y581 213 aa18.52■□□□□ 0.56
LIM2-202ENST00000596399 NCOR1O75376 2440 aa18.52■□□□□ 0.55
LIM2-202ENST00000596399 MICAL3Q7RTP6 2002 aa18.52■□□□□ 0.55
LIM2-202ENST00000596399 CCDC69A6NI79 296 aa18.51■□□□□ 0.55
LIM2-202ENST00000596399 ITGB5P18084 799 aa18.51■□□□□ 0.55
LIM2-202ENST00000596399 MCM5P33992 734 aa18.51■□□□□ 0.55
LIM2-202ENST00000596399 HTRA4P83105 476 aaPredicted RBP18.51■□□□□ 0.55
LIM2-202ENST00000596399 RUFY4Q6ZNE9 571 aa18.51■□□□□ 0.55
LIM2-202ENST00000596399 SEPT8Q92599 483 aa18.51■□□□□ 0.55
LIM2-202ENST00000596399 PSTPIP2Q9H939 334 aa18.51■□□□□ 0.55
LIM2-202ENST00000596399 SIP14410 1827 aa18.51■□□□□ 0.55
LIM2-202ENST00000596399 KCNA2P16389 499 aa18.5■□□□□ 0.55
LIM2-202ENST00000596399 TCF7P36402 384 aaPredicted RBP18.5■□□□□ 0.55
LIM2-202ENST00000596399 FBXO22Q8NEZ5 403 aa18.5■□□□□ 0.55
LIM2-202ENST00000596399 KHSRPQ92945 711 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms