RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, human

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00649-208	ENST00000596365	ZNF618	Q5T7W0	954 aa		10.05	□□□□□ -0.8
LINC00649-208	ENST00000596365	TRAF7	Q6Q0C0	670 aa		10.05	□□□□□ -0.8
LINC00649-208	ENST00000596365	C7orf31	Q8N865	590 aa		10.05	□□□□□ -0.8
LINC00649-208	ENST00000596365	C11orf84	Q9BUA3	381 aa	Predicted RBP	10.05	□□□□□ -0.8
LINC00649-208	ENST00000596365	IGFLR1	Q9H665	355 aa		10.05	□□□□□ -0.8
LINC00649-208	ENST00000596365	C1orf115	Q9H7X2	142 aa		10.05	□□□□□ -0.8
LINC00649-208	ENST00000596365	PTPDC1	A2A3K4	754 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	MINDY4B	A8MYZ0	360 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365		B4DLN1	442 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	C5orf67	F2Z3F1	127 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	ICAM1	P05362	532 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	MMP3	P08254	477 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	CAST	P20810	708 aa	Known RBP	10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	CTNNB1	P35222	781 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	NDUFV1	P49821	464 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	MRPL12	P52815	198 aa	Known RBP	10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	SNAP25	P60880	206 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	ADAM15	Q13444	863 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	TRIM71	Q2Q1W2	868 aa	Known RBP	10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	HSP90AB4P	Q58FF6	505 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	GIMAP6	Q6P9H5	292 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	TMEM57	Q8N5G2	664 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	DBF4B	Q8NFT6	615 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	AFG1L	Q8WV93	481 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	FRAT1	Q92837	279 aa	Predicted RBP	10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	TOP1MT	Q969P6	601 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	ASIC4	Q96FT7	647 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	IL1RAPL2	Q9NP60	686 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	HDAC6	Q9UBN7	1215 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	PRR12	Q9ULL5	1215 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	EXOC6B	Q9Y2D4	811 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	RWDD3	Q9Y3V2	267 aa		10.04	□□□□□ -0.8
LINC00649-208	ENST00000596365	PLIN4	Q96Q06	1357 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	UPP2	O95045	317 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	TSPY3	P0CV98	308 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	TSPY8	P0CW00	308 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	MCC	P23508	829 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	EDNRB	P24530	442 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	CALML3	P27482	149 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	PLEKHG4	Q58EX7	1191 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	RCSD1	Q6JBY9	416 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	ZSCAN25	Q6NSZ9	544 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	KCTD1	Q719H9	257 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	CLASRP	Q8N2M8	674 aa	Known RBP	10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	FIBCD1	Q8N539	461 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	DNER	Q8NFT8	737 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	NEDD1	Q8NHV4	660 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	KAT2B	Q92831	832 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	PPP2R3C	Q969Q6	453 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	MSLNL	Q96KJ4	702 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	KATNAL1	Q9BW62	490 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	PLA2G2E	Q9NZK7	142 aa		10.03	□□□□□ -0.8
LINC00649-208	ENST00000596365	GSG1L2	A8MUP6	293 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	RSPH10B2	B2RC85	870 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	NFIB	O00712	420 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	GRM6	O15303	877 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	LINC01565	O15544	149 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	PRDM1	O75626	825 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	ARIH2	O95376	493 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	GH1	P01241	217 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	IFIT2	P09913	472 aa	Known RBP	10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	RSPH10B	P0C881	870 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	GTF2F1	P35269	517 aa	Known RBP eCLIP	10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	BMPR1A	P36894	532 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	RRP1	P56182	461 aa	Known RBP	10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	COASY	Q13057	564 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	DGKD	Q16760	1214 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	MCTP2	Q6DN12	878 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	SLC30A10	Q6XR72	485 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	RNF207	Q6ZRF8	634 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	ADSSL1	Q8N142	457 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	SMRP1	Q8NCR6	262 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	RHPN1	Q8TCX5	695 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	SEPT8	Q92599	483 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	NKD2	Q969F2	451 aa	Predicted RBP	10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	CHMP4C	Q96CF2	233 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	IL17RA	Q96F46	866 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	STRBP	Q96SI9	672 aa	Known RBP	10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	ALG1	Q9BT22	464 aa		10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	PHF7	Q9BWX1	381 aa	Predicted RBP	10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	IFIH1	Q9BYX4	1025 aa	Known RBP	10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	PUS7L	Q9H0K6	701 aa	Known RBP	10.02	□□□□□ -0.81
LINC00649-208	ENST00000596365	CACNA1G	O43497	2377 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	TPR	P12270	2363 aa	Known RBP	10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	FRYL	O94915	3013 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	MMP1	P03956	469 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	CHGB	P05060	677 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	ICAM3	P32942	547 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	ARHGAP1	Q07960	439 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	PTPN21	Q16825	1174 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	CCDC62	Q6P9F0	684 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	WNT8B	Q93098	351 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	RIPOR3	Q96MK2	946 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	RANBP17	Q9H2T7	1088 aa	Known RBP	10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	BOLA2	Q9H3K6	86 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	INCENP	Q9NQS7	918 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	PNMA2	Q9UL42	364 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	MYO10	Q9HD67	2058 aa		10.01	□□□□□ -0.81
LINC00649-208	ENST00000596365	KIAA1671	Q9BY89	1806 aa		10	□□□□□ -0.81
LINC00649-208	ENST00000596365	HAS3	O00219	553 aa		10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms