RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 AGO4Q9HCK5 861 aaKnown RBP15.7■□□□□ 0.1
SHKBP1-207ENST00000595631 DNAH12Q6ZR08 3092 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 MMP1P03956 469 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 KRT2P35908 639 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 MCM2P49736 904 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 ITGB3BPQ13352 177 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 ITGA7Q13683 1181 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 DGKDQ16760 1214 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 INF2Q27J81 1249 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 BRDTQ58F21 947 aaPredicted RBP15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 KRT25Q7Z3Z0 450 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 KAT2BQ92831 832 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 CDHR1Q96JP9 859 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 SENP7Q9BQF6 1050 aa15.69■□□□□ 0.1
SHKBP1-207ENST00000595631 CCDC194A0A1B0GVG4 234 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 BTBD18B2RXH4 712 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 DDX39AO00148 427 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 ARVCFO00192 962 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 CABYRO75952 493 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 TDP2O95551 362 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 HOXD8P13378 290 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 CDK7P50613 346 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 HMGN5P82970 282 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 TRIM29Q14134 588 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 NONOQ15233 471 aaKnown RBP eCLIP15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 NBPF20Q3BBV1 942 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 PRR16Q569H4 304 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 C1orf53Q5VUE5 145 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 PIK3AP1Q6ZUJ8 805 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 SH3RF1Q7Z6J0 888 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 DIS3L2Q8IYB7 885 aaKnown RBP15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 FAM184AQ8NB25 1140 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 TNFRSF25Q93038 417 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 LENG9Q96B70 501 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 C8orf76Q96K31 380 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 GPR20Q99678 358 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 PRDM5Q9NQX1 630 aaPredicted RBP15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 NR2E3Q9Y5X4 410 aa15.68■□□□□ 0.1
SHKBP1-207ENST00000595631 SCN5AQ14524 2016 aa15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 NOP56O00567 594 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 KPNA6O60684 536 aa15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 CIITAP33076 1130 aa15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 FAM47CQ5HY64 1035 aa15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 NIPA1Q7RTP0 329 aa15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 TRIM50Q86XT4 487 aa15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 SLC43A3Q8NBI5 491 aa15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 IL27Q8NEV9 243 aa15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 GJA10Q969M2 543 aa15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 PDLIM7Q9NR12 457 aa15.67■□□□□ 0.1
SHKBP1-207ENST00000595631 TANC1Q9C0D5 1861 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 GSTTP1A0A1W2PQM5 241 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 MAFGO15525 162 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 LGALS2P05162 132 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 PSEN2P49810 448 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 USP11P51784 963 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 FAAP100Q0VG06 881 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 LETM2Q2VYF4 491 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 UTP14CQ5TAP6 766 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 ANKRD33Q7Z3H0 272 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 FAM126BQ8IXS8 530 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 GIMAP8Q8ND71 665 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 SDF4Q9BRK5 362 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 C16orf70Q9BSU1 422 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 TRPV6Q9H1D0 765 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 BRMS1Q9HCU9 246 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 JPH1Q9HDC5 661 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 NFASCO94856 1347 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 CEP290O15078 2479 aa15.66■□□□□ 0.1
SHKBP1-207ENST00000595631 TRIM43BA6NCK2 446 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 IPO5O00410 1097 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 WNT7AO00755 349 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 DHX15O43143 795 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 SLC37A4O43826 429 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 B4GALT4O60513 344 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 PPFIA4O75335 1185 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 CCNE2O96020 404 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 F2P00734 622 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 CLTBP09497 229 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 GJB2P29033 226 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 TCF7P36402 384 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 SETQ01105 290 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 MFSD10Q14728 455 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 FBXO18Q8NFZ0 1043 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 TRIM43Q96BQ3 446 aaPredicted RBP15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 ZNF577Q9BSK1 485 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 TRMT13Q9NUP7 481 aaKnown RBP15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 SLC9A2Q9UBY0 812 aa15.65■□□□□ 0.1
SHKBP1-207ENST00000595631 CYP3A7-CYP3A51PA0A087WV96 503 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 DCDC2CA8MYV0 355 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 KIF28PB7ZC32 967 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 HAS3O00219 553 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 MSH4O15457 936 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 CD4P01730 458 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 CYP3A7P24462 503 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 ITGB8P26012 769 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 ACTR2P61160 394 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 KIAA0753Q2KHM9 967 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 PRPF38BQ5VTL8 546 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 NEK8Q86SG6 692 aa15.64■□□□□ 0.09
SHKBP1-207ENST00000595631 SMC3Q9UQE7 1217 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms