RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 NIPA1Q7RTP0 329 aa22.28■■□□□ 1.16
LSM4-203ENST00000593829 TBCKQ8TEA7 893 aa22.28■■□□□ 1.16
LSM4-203ENST00000593829 STARD7Q9NQZ5 370 aa22.28■■□□□ 1.16
LSM4-203ENST00000593829 POLR3EQ9NVU0 708 aa22.28■■□□□ 1.16
LSM4-203ENST00000593829 CCDC194A0A1B0GVG4 234 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 CABYRO75952 493 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 USP11P51784 963 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 ATN1P54259 1190 aaPredicted RBP22.27■■□□□ 1.16
LSM4-203ENST00000593829 NONOQ15233 471 aaKnown RBP eCLIP22.27■■□□□ 1.16
LSM4-203ENST00000593829 HS1BP3Q53T59 392 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 CXCL17Q6UXB2 119 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 SLC39A5Q6ZMH5 540 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 GIMAP8Q8ND71 665 aaPredicted RBP22.27■■□□□ 1.16
LSM4-203ENST00000593829 PPTC7Q8NI37 304 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 OXER1Q8TDS5 423 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 VTI1AQ96AJ9 217 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 SPATA33Q96N06 139 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 KCNH7Q9NS40 1196 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 KIF3AQ9Y496 699 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 ELP1O95163 1332 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 FAM86B1E9PN63 330 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 SORBS3O60504 671 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 KPNA6O60684 536 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 FAM86B2P0C5J1 330 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 DPF3Q92784 378 aa22.27■■□□□ 1.16
LSM4-203ENST00000593829 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.27■■□□□ 1.16
LSM4-203ENST00000593829 MMP3P08254 477 aa22.26■■□□□ 1.15
LSM4-203ENST00000593829 MYL3P08590 195 aa22.26■■□□□ 1.15
LSM4-203ENST00000593829 CIITAP33076 1130 aa22.26■■□□□ 1.15
LSM4-203ENST00000593829 NASPP49321 788 aaPredicted RBP22.26■■□□□ 1.15
LSM4-203ENST00000593829 LRRC26Q2I0M4 334 aa22.26■■□□□ 1.15
LSM4-203ENST00000593829 METTL7BQ6UX53 244 aa22.26■■□□□ 1.15
LSM4-203ENST00000593829 CYFIP1Q7L576 1253 aa22.26■■□□□ 1.15
LSM4-203ENST00000593829 ATP9AO75110 1047 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 ARP10275 920 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 KCNA2P16389 499 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 PURAQ00577 322 aaKnown RBP22.25■■□□□ 1.15
LSM4-203ENST00000593829 SAFBQ15424 915 aaKnown RBP eCLIP22.25■■□□□ 1.15
LSM4-203ENST00000593829 DGKDQ16760 1214 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 PLA2G4DQ86XP0 818 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 ANP32BQ92688 251 aaKnown RBP22.25■■□□□ 1.15
LSM4-203ENST00000593829 BCAS3Q9H6U6 928 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 PKD2L1Q9P0L9 805 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 HSDL1Q3SXM5 330 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 C1orf53Q5VUE5 145 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 ZSCAN30Q86W11 494 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 DIS3L2Q8IYB7 885 aaKnown RBP22.25■■□□□ 1.15
LSM4-203ENST00000593829 FBXO18Q8NFZ0 1043 aa22.25■■□□□ 1.15
LSM4-203ENST00000593829 MYH7BA7E2Y1 1941 aa22.24■■□□□ 1.15
LSM4-203ENST00000593829 IGLV3-22A0A075B6J6 115 aa22.24■■□□□ 1.15
LSM4-203ENST00000593829 BTBD18B2RXH4 712 aa22.24■■□□□ 1.15
LSM4-203ENST00000593829 SETQ01105 290 aaPredicted RBP22.24■■□□□ 1.15
LSM4-203ENST00000593829 GUCY1B3Q02153 619 aa22.24■■□□□ 1.15
LSM4-203ENST00000593829 NR5A1Q13285 461 aa22.24■■□□□ 1.15
LSM4-203ENST00000593829 CUL4AQ13619 759 aa22.24■■□□□ 1.15
LSM4-203ENST00000593829 SNX17Q15036 470 aa22.24■■□□□ 1.15
LSM4-203ENST00000593829 INF2Q27J81 1249 aa22.24■■□□□ 1.15
LSM4-203ENST00000593829 PIK3AP1Q6ZUJ8 805 aa22.24■■□□□ 1.15
LSM4-203ENST00000593829 MTG1Q9BT17 334 aaPredicted RBP22.24■■□□□ 1.15
LSM4-203ENST00000593829 AGO4Q9HCK5 861 aaKnown RBP22.24■■□□□ 1.15
LSM4-203ENST00000593829 SMC3Q9UQE7 1217 aa22.24■■□□□ 1.15
LSM4-203ENST00000593829 TNRC18O15417 2968 aaPredicted RBP22.24■■□□□ 1.15
LSM4-203ENST00000593829 NOP56O00567 594 aaKnown RBP22.23■■□□□ 1.15
LSM4-203ENST00000593829 EDIL3O43854 480 aa22.23■■□□□ 1.15
LSM4-203ENST00000593829 EVI5O60447 810 aa22.23■■□□□ 1.15
LSM4-203ENST00000593829 PPFIA4O75335 1185 aa22.23■■□□□ 1.15
LSM4-203ENST00000593829 TERF1P54274 439 aa22.23■■□□□ 1.15
LSM4-203ENST00000593829 TNFRSF25Q93038 417 aa22.23■■□□□ 1.15
LSM4-203ENST00000593829 A0A0U1RQG5 324 aaPredicted RBP22.23■■□□□ 1.15
LSM4-203ENST00000593829 GJB2P29033 226 aa22.23■■□□□ 1.15
LSM4-203ENST00000593829 RTP1P59025 263 aa22.23■■□□□ 1.15
LSM4-203ENST00000593829 HSP90AA2PQ14568 343 aaPredicted RBP22.23■■□□□ 1.15
LSM4-203ENST00000593829 PRR16Q569H4 304 aa22.23■■□□□ 1.15
LSM4-203ENST00000593829 HOXD8P13378 290 aaPredicted RBP22.22■■□□□ 1.15
LSM4-203ENST00000593829 SDF4Q9BRK5 362 aa22.22■■□□□ 1.15
LSM4-203ENST00000593829 FOXD4L1Q9NU39 408 aa22.22■■□□□ 1.15
LSM4-203ENST00000593829 DNAH12Q6ZR08 3092 aa22.22■■□□□ 1.15
LSM4-203ENST00000593829 NFASCO94856 1347 aa22.22■■□□□ 1.15
LSM4-203ENST00000593829 CYP3A7-CYP3A51PA0A087WV96 503 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 CYP3A7P24462 503 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 NEK8Q86SG6 692 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 ATP11BQ9Y2G3 1177 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 ARVCFO00192 962 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 SP4Q02446 784 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 ITGB3BPQ13352 177 aaPredicted RBP22.21■■□□□ 1.15
LSM4-203ENST00000593829 ITGA7Q13683 1181 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 TRIM60Q495X7 471 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 EARS2Q5JPH6 523 aaKnown RBP22.21■■□□□ 1.15
LSM4-203ENST00000593829 MOXD1Q6UVY6 613 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 LENG9Q96B70 501 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 GPR20Q99678 358 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 ZNF577Q9BSK1 485 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 SEZ6LQ9BYH1 1024 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 JPH1Q9HDC5 661 aaPredicted RBP22.21■■□□□ 1.15
LSM4-203ENST00000593829 LMBRD1Q9NUN5 540 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 NR2E3Q9Y5X4 410 aa22.21■■□□□ 1.15
LSM4-203ENST00000593829 IPO5O00410 1097 aaKnown RBP22.2■■□□□ 1.14
LSM4-203ENST00000593829 PSMC6P62333 389 aa22.2■■□□□ 1.14
LSM4-203ENST00000593829 LETM2Q2VYF4 491 aa22.2■■□□□ 1.14
LSM4-203ENST00000593829 Q4G0T1 1027 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 982.6 ms