RNA–Protein interactions for RNA: ENST00000593223.1

SMAD4-216, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-216ENST00000593223 SIGLEC10Q96LC7 697 aa7.05□□□□□ -1.28
SMAD4-216ENST00000593223 FEZ1Q99689 392 aa7.05□□□□□ -1.28
SMAD4-216ENST00000593223 CNOT6Q9ULM6 557 aaKnown RBP7.05□□□□□ -1.28
SMAD4-216ENST00000593223 SMG5Q9UPR3 1016 aaKnown RBP7.05□□□□□ -1.28
SMAD4-216ENST00000593223 COQ6Q9Y2Z9 468 aa7.05□□□□□ -1.28
SMAD4-216ENST00000593223 IRS2Q9Y4H2 1338 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 TCRBV5S2A0A599 114 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 ENPP3O14638 875 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 RFPL3O75679 317 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 CLSTN1O94985 981 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 IGFALSP35858 605 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 MC3RP41968 323 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 TAF7LQ5H9L4 462 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 CYP4F22Q6NT55 531 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 CD300LDQ6UXZ3 194 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 ARHGAP36Q6ZRI8 547 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 ZC3H18Q86VM9 953 aaKnown RBP7.04□□□□□ -1.28
SMAD4-216ENST00000593223 IGDCC3Q8IVU1 814 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 RBM12BQ8IXT5 1001 aaKnown RBP7.04□□□□□ -1.28
SMAD4-216ENST00000593223 NLGN1Q8N2Q7 840 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 CISD2Q8N5K1 135 aaKnown RBP7.04□□□□□ -1.28
SMAD4-216ENST00000593223 ARRDC4Q8NCT1 418 aa7.04□□□□□ -1.28
SMAD4-216ENST00000593223 B4E1Z4 1266 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 NPIPB6E9PJ23 425 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 RFXAPO00287 272 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 WNT9AO14904 365 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 ASLP04424 464 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 PDE6AP16499 860 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 FLT3P36888 993 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 GRIN1Q05586 938 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 GPR19Q15760 415 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 DDX53Q86TM3 631 aaKnown RBP7.03□□□□□ -1.28
SMAD4-216ENST00000593223 OSTM1Q86WC4 334 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 FAM126BQ8IXS8 530 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 UHMK1Q8TAS1 419 aaKnown RBP7.03□□□□□ -1.28
SMAD4-216ENST00000593223 SLKQ9H2G2 1235 aaPredicted RBP7.03□□□□□ -1.28
SMAD4-216ENST00000593223 ASH2LQ9UBL3 628 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 CBLCQ9ULV8 474 aa7.03□□□□□ -1.28
SMAD4-216ENST00000593223 TNPO3Q9Y5L0 923 aaKnown RBP7.03□□□□□ -1.28
SMAD4-216ENST00000593223 DNAJC8O75937 253 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-216ENST00000593223 KRT1P04264 644 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 HMGB1P09429 215 aaKnown RBP7.02□□□□□ -1.29
SMAD4-216ENST00000593223 ATF2P15336 505 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 PI3P19957 117 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 SDSP20132 328 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 FBLN1P23142 703 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 STAT5AP42229 794 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 LIMS1P48059 325 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 CACNB2Q08289 660 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-216ENST00000593223 TUSC3Q13454 348 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 KCNA10Q16322 511 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 UBE2R2Q712K3 238 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-216ENST00000593223 DHX37Q8IY37 1157 aaKnown RBP7.02□□□□□ -1.29
SMAD4-216ENST00000593223 NIM1KQ8IY84 436 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 IGSF22Q8N9C0 903 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 CPA5Q8WXQ8 436 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 TOE1Q96GM8 510 aaKnown RBP7.02□□□□□ -1.29
SMAD4-216ENST00000593223 KRTAP4-9Q9BYQ8 210 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 CELF4Q9BZC1 486 aaKnown RBP7.02□□□□□ -1.29
SMAD4-216ENST00000593223 CD244Q9BZW8 370 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 SAMD15Q9P1V8 674 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 MAGEC2Q9UBF1 373 aaPredicted RBP7.02□□□□□ -1.29
SMAD4-216ENST00000593223 KCTD3Q9Y597 815 aa7.02□□□□□ -1.29
SMAD4-216ENST00000593223 SCRIBQ14160 1630 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 SMARCA2P51531 1590 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 IRS4O14654 1257 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-216ENST00000593223 SMARCA5O60264 1052 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-216ENST00000593223 LTFP02788 710 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 CKMP06732 381 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 CYP2C8P10632 490 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 HSD3B2P26439 372 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 JAM2P57087 298 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 LINC00310P59036 64 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 NKX3-2P78367 333 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 FOXO4P98177 505 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 ZNF460Q14592 562 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 SSPNQ14714 243 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 ZNF385BQ569K4 471 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 HABP4Q5JVS0 413 aaKnown RBP7.01□□□□□ -1.29
SMAD4-216ENST00000593223 CNNM4Q6P4Q7 775 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 CNKSR3Q6P9H4 555 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 KCTD1Q719H9 257 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.01□□□□□ -1.29
SMAD4-216ENST00000593223 B3GNT8Q7Z7M8 397 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 PTRH1Q86Y79 214 aaKnown RBP7.01□□□□□ -1.29
SMAD4-216ENST00000593223 MIB1Q86YT6 1006 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 NLGN4XQ8N0W4 816 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 SMARCC2Q8TAQ2 1214 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 FBXO41Q8TF61 875 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 NINJ1Q92982 152 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 NGRNQ9NPE2 291 aaKnown RBP7.01□□□□□ -1.29
SMAD4-216ENST00000593223 CD320Q9NPF0 282 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 DTLQ9NZJ0 730 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 PLAAQ9Y263 795 aa7.01□□□□□ -1.29
SMAD4-216ENST00000593223 KCNK3O14649 394 aa7□□□□□ -1.29
SMAD4-216ENST00000593223 NPTXRO95502 500 aa7□□□□□ -1.29
SMAD4-216ENST00000593223 JMJD7P0C870 316 aa7□□□□□ -1.29
SMAD4-216ENST00000593223 IGFBP6P24592 240 aaPredicted RBP7□□□□□ -1.29
SMAD4-216ENST00000593223 ZCCHC8Q6NZY4 707 aaKnown RBP7□□□□□ -1.29
SMAD4-216ENST00000593223 ABHD17CQ6PCB6 329 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms