RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 MCTP1Q6DN14 999 aa16.95■□□□□ 0.3
DDX39A-221ENST00000593026 NOSTRINQ8IVI9 506 aa16.95■□□□□ 0.3
DDX39A-221ENST00000593026 FERMT2Q96AC1 680 aa16.95■□□□□ 0.3
DDX39A-221ENST00000593026 SENP6Q9GZR1 1112 aaPredicted RBP16.95■□□□□ 0.3
DDX39A-221ENST00000593026 BCAS3Q9H6U6 928 aa16.95■□□□□ 0.3
DDX39A-221ENST00000593026 POLR3EQ9NVU0 708 aa16.95■□□□□ 0.3
DDX39A-221ENST00000593026 CYP3A7-CYP3A51PA0A087WV96 503 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 A0A1W2PQ45 241 aaPredicted RBP16.94■□□□□ 0.3
DDX39A-221ENST00000593026 A0A1W2PQY0 241 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 NOP56O00567 594 aaKnown RBP16.94■□□□□ 0.3
DDX39A-221ENST00000593026 CCNT1O60563 726 aaKnown RBP16.94■□□□□ 0.3
DDX39A-221ENST00000593026 MYL3P08590 195 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 CYP3A7P24462 503 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 SP4Q02446 784 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 HSDL1Q3SXM5 330 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 CXCL17Q6UXB2 119 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 LENG9Q96B70 501 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 GLT1D1Q96MS3 346 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 SDF4Q9BRK5 362 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 ZNF577Q9BSK1 485 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 DDX25Q9UHL0 483 aaKnown RBP16.94■□□□□ 0.3
DDX39A-221ENST00000593026 DOCK5Q9H7D0 1870 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 NFASCO94856 1347 aa16.94■□□□□ 0.3
DDX39A-221ENST00000593026 KIF28PB7ZC32 967 aa16.93■□□□□ 0.3
DDX39A-221ENST00000593026 IPO5O00410 1097 aaKnown RBP16.93■□□□□ 0.3
DDX39A-221ENST00000593026 KPNA6O60684 536 aa16.93■□□□□ 0.3
DDX39A-221ENST00000593026 CABYRO75952 493 aa16.93■□□□□ 0.3
DDX39A-221ENST00000593026 U2AF2P26368 475 aaKnown RBP eCLIP16.93■□□□□ 0.37e-10■□□□□ 9.5
DDX39A-221ENST00000593026 ITGB3BPQ13352 177 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-221ENST00000593026 BECN1Q14457 450 aa16.93■□□□□ 0.3
DDX39A-221ENST00000593026 DGKDQ16760 1214 aa16.93■□□□□ 0.3
DDX39A-221ENST00000593026 Q4G0T1 1027 aa16.93■□□□□ 0.3
DDX39A-221ENST00000593026 PPP4R3AQ6IN85 833 aa16.93■□□□□ 0.3
DDX39A-221ENST00000593026 MBOAT7Q96N66 472 aa16.93■□□□□ 0.3
DDX39A-221ENST00000593026 JPH1Q9HDC5 661 aaPredicted RBP16.93■□□□□ 0.3
DDX39A-221ENST00000593026 STARD7Q9NQZ5 370 aa16.93■□□□□ 0.3
DDX39A-221ENST00000593026 VPS37CA5D8V6 355 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-221ENST00000593026 MSH4O15457 936 aa16.92■□□□□ 0.3
DDX39A-221ENST00000593026 SLC37A4O43826 429 aa16.92■□□□□ 0.3
DDX39A-221ENST00000593026 PURAQ00577 322 aaKnown RBP16.92■□□□□ 0.3
DDX39A-221ENST00000593026 VTI1AQ96AJ9 217 aa16.92■□□□□ 0.3
DDX39A-221ENST00000593026 UIMC1Q96RL1 719 aa16.92■□□□□ 0.3
DDX39A-221ENST00000593026 GPR20Q99678 358 aa16.92■□□□□ 0.3
DDX39A-221ENST00000593026 HTATIP2Q9BUP3 242 aa16.92■□□□□ 0.3
DDX39A-221ENST00000593026 TBC1D22BQ9NU19 505 aa16.92■□□□□ 0.3
DDX39A-221ENST00000593026 SLC9A2Q9UBY0 812 aa16.92■□□□□ 0.3
DDX39A-221ENST00000593026 NOL7Q9UMY1 257 aaKnown RBP16.92■□□□□ 0.3
DDX39A-221ENST00000593026 DDX39AO00148 427 aaKnown RBP16.91■□□□□ 0.3
DDX39A-221ENST00000593026 PPFIA4O75335 1185 aa16.91■□□□□ 0.3
DDX39A-221ENST00000593026 HOXD8P13378 290 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-221ENST00000593026 ATP2B1P20020 1258 aa16.91■□□□□ 0.3
DDX39A-221ENST00000593026 SYT1P21579 422 aa16.91■□□□□ 0.3
DDX39A-221ENST00000593026 ATN1P54259 1190 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-221ENST00000593026 SPRYD3Q8NCJ5 442 aa16.91■□□□□ 0.3
DDX39A-221ENST00000593026 MTG1Q9BT17 334 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-221ENST00000593026 TCEAL9Q9UHQ7 104 aa16.91■□□□□ 0.3
DDX39A-221ENST00000593026 ELP1O95163 1332 aa16.91■□□□□ 0.3
DDX39A-221ENST00000593026 DHX15O43143 795 aaKnown RBP16.9■□□□□ 0.3
DDX39A-221ENST00000593026 ZNF286BP0CG31 522 aa16.9■□□□□ 0.3
DDX39A-221ENST00000593026 SLC39A5Q6ZMH5 540 aa16.9■□□□□ 0.3
DDX39A-221ENST00000593026 ETNPPLQ8TBG4 499 aa16.9■□□□□ 0.3
DDX39A-221ENST00000593026 SEPT1Q8WYJ6 367 aa16.9■□□□□ 0.3
DDX39A-221ENST00000593026 SLC5A5Q92911 643 aa16.9■□□□□ 0.3
DDX39A-221ENST00000593026 RIT2Q99578 217 aa16.9■□□□□ 0.3
DDX39A-221ENST00000593026 TELO2Q9Y4R8 837 aa16.9■□□□□ 0.3
DDX39A-221ENST00000593026 A0A0U1RQG5 324 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-221ENST00000593026 WNT7AO00755 349 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 TBX3O15119 743 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 TNRC18O15417 2968 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-221ENST00000593026 MARCH6O60337 910 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 NEMFO60524 1076 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 GAS7O60861 476 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 LGALS2P05162 132 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 TCF7P36402 384 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-221ENST00000593026 TRAPPC10P48553 1259 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 ACTR2P61160 394 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 PSMC6P62333 389 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 KRT76Q01546 638 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 TTC38Q5R3I4 469 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 PRPF38BQ5VTL8 546 aaKnown RBP16.89■□□□□ 0.29
DDX39A-221ENST00000593026 LRCH2Q5VUJ6 765 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 GJA10Q969M2 543 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 TEKT3Q9BXF9 490 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 KCNMB3Q9NPA1 279 aa16.89■□□□□ 0.29
DDX39A-221ENST00000593026 GSTTP1A0A1W2PQM5 241 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 STX6O43752 255 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 CCNE2O96020 404 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 F2P00734 622 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 MCM7P33993 719 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 CHMP4BP1P59074 171 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 ORC2Q13416 577 aaPredicted RBP16.88■□□□□ 0.29
DDX39A-221ENST00000593026 ITGA7Q13683 1181 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 CALCRLQ16602 461 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 LRRC26Q2I0M4 334 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 UTP14CQ5TAP6 766 aaKnown RBP16.88■□□□□ 0.29
DDX39A-221ENST00000593026 ZNF746Q6NUN9 644 aaPredicted RBP16.88■□□□□ 0.29
DDX39A-221ENST00000593026 FAM20AQ96MK3 541 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 KATNAL1Q9BW62 490 aa16.88■□□□□ 0.29
DDX39A-221ENST00000593026 PSMD10O75832 226 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms