RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 MROH2BQ7Z745 1585 aa8.39□□□□□ -1.07
VMP1-215ENST00000592619 NCAPD3P42695 1498 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 ATAD2BQ9ULI0 1458 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 TGM5O43548 720 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 FUCA1P04066 466 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 PHC1P78364 1004 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 PIN1Q13526 163 aaPredicted RBP8.38□□□□□ -1.07
VMP1-215ENST00000592619 GPR158Q5T848 1215 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 LZTR1Q8N653 840 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 CLRN3Q8NCR9 226 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.38□□□□□ -1.07
VMP1-215ENST00000592619 BCL7CQ8WUZ0 217 aaPredicted RBP8.38□□□□□ -1.07
VMP1-215ENST00000592619 HOOK2Q96ED9 719 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 AHCYL2Q96HN2 611 aaKnown RBP8.38□□□□□ -1.07
VMP1-215ENST00000592619 KRTAP4-12Q9BQ66 201 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 ADAMTS10Q9H324 1103 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 SLC6A20Q9NP91 592 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 ZIM2Q9NZV7 527 aa8.38□□□□□ -1.07
VMP1-215ENST00000592619 NKRFO15226 690 aaKnown RBP eCLIP8.37□□□□□ -1.07
VMP1-215ENST00000592619 TGFB1P01137 390 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 COL6A2P12110 1019 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 KRT15P19012 456 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 GRIK1P39086 918 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 IRF9Q00978 393 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 ZNF174Q15697 407 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 DDB1Q16531 1140 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 HSF5Q4G112 596 aaPredicted RBP8.37□□□□□ -1.07
VMP1-215ENST00000592619 ANGEL2Q5VTE6 544 aaKnown RBP8.37□□□□□ -1.07
VMP1-215ENST00000592619 INTS5Q6P9B9 1019 aaKnown RBP8.37□□□□□ -1.07
VMP1-215ENST00000592619 HDGFL2Q7Z4V5 671 aaPredicted RBP8.37□□□□□ -1.07
VMP1-215ENST00000592619 NOSTRINQ8IVI9 506 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 NLGN4XQ8N0W4 816 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 ALPK1Q96QP1 1244 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 SLC13A1Q9BZW2 595 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 VTA1Q9NP79 307 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 AASDHPPTQ9NRN7 309 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 ACSL6Q9UKU0 697 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 RWDD3Q9Y3V2 267 aa8.37□□□□□ -1.07
VMP1-215ENST00000592619 KRIT1O00522 736 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 MAN2B1O00754 1011 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 DVL2O14641 736 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 CLASP2O75122 1294 aaKnown RBP8.36□□□□□ -1.07
VMP1-215ENST00000592619 USP2O75604 605 aaPredicted RBP8.36□□□□□ -1.07
VMP1-215ENST00000592619 SCGB1D2O95969 90 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 PRNPP04156 253 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 SMAD3P84022 425 aaKnown RBP8.36□□□□□ -1.07
VMP1-215ENST00000592619 CHRNEQ04844 493 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 ZP2Q05996 745 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 BNIP3Q12983 259 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 KLF1Q13351 362 aaPredicted RBP8.36□□□□□ -1.07
VMP1-215ENST00000592619 LRRC41Q15345 812 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 TERF2Q15554 542 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 SMAD2Q15796 467 aaKnown RBP8.36□□□□□ -1.07
VMP1-215ENST00000592619 FIGNQ5HY92 759 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 BROXQ5VW32 411 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 CYP4F22Q6NT55 531 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 GALNT18Q6P9A2 607 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 CEP128Q6ZU80 1094 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 PTRH1Q86Y79 214 aaKnown RBP8.36□□□□□ -1.07
VMP1-215ENST00000592619 SPPL2CQ8IUH8 684 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 CHPFQ8IZ52 775 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 KIAA1958Q8N8K9 716 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 UHMK1Q8TAS1 419 aaKnown RBP8.36□□□□□ -1.07
VMP1-215ENST00000592619 PIP4K2CQ8TBX8 421 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 SH3RF2Q8TEC5 729 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 PDLIM7Q9NR12 457 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 SLAMF8Q9P0V8 285 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 TMEM59LQ9UK28 342 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 DSEQ9UL01 958 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 SRPK3Q9UPE1 567 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 SLC5A6Q9Y289 635 aa8.36□□□□□ -1.07
VMP1-215ENST00000592619 KIF3BO15066 747 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 NRDCO43847 1150 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 ABLIM3O94929 683 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 CD8BP10966 210 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 TBX4P57082 545 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 KRT85P78386 507 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 MVKQ03426 396 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 EMC4Q5J8M3 183 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 RALGPS1Q5JS13 557 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 RASSF3Q86WH2 238 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 PDZD8Q8NEN9 1154 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 USP33Q8TEY7 942 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 DLG3Q92796 817 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 ELF4Q99607 663 aaPredicted RBP8.35□□□□□ -1.07
VMP1-215ENST00000592619 PDGFDQ9GZP0 370 aaPredicted RBP8.35□□□□□ -1.07
VMP1-215ENST00000592619 IMPACTQ9P2X3 320 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 NUB1Q9Y5A7 615 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 B3GALT1Q9Y5Z6 326 aa8.35□□□□□ -1.07
VMP1-215ENST00000592619 PRC1O43663 620 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 MAFKO60675 156 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 HIP1RO75146 1068 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 RFPL1O75677 317 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 KRT37O76014 449 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 SLC9A1P19634 815 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 LSP1P33241 339 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 CD96P40200 585 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 SLC6A11P48066 632 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 CHRNA2Q15822 529 aa8.34□□□□□ -1.07
VMP1-215ENST00000592619 SLC14A2Q15849 920 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms