RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 FAM76AQ8TAV0 307 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 RASSF4Q9H2L5 321 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 KCTD10Q9H3F6 313 aa12.82□□□□□ -0.36
ZNF540-210ENST00000592533 A0A0U1RQG5 324 aaPredicted RBP12.81□□□□□ -0.36
ZNF540-210ENST00000592533 BBOX1O75936 387 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 PAFAH1B1P43034 410 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 MRPL12P52815 198 aaKnown RBP12.81□□□□□ -0.36
ZNF540-210ENST00000592533 EDRF1Q3B7T1 1238 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 FOXR1Q6PIV2 292 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 RBM17Q96I25 401 aaKnown RBP12.81□□□□□ -0.36
ZNF540-210ENST00000592533 PITPNM2Q9BZ72 1349 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 CYP3A7-CYP3A51PA0A087WV96 503 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 CES2O00748 559 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 CYP3A7P24462 503 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 TNNI2P48788 182 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 SLC18A3Q16572 532 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 CFAP221Q4G0U5 840 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 MOXD1Q6UVY6 613 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 LRRC47Q8N1G4 583 aaKnown RBP12.81□□□□□ -0.36
ZNF540-210ENST00000592533 TBC1D16Q8TBP0 767 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 RIN2Q8WYP3 895 aaPredicted RBP12.81□□□□□ -0.36
ZNF540-210ENST00000592533 KCNMB3Q9NPA1 279 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 GDF3Q9NR23 364 aa12.81□□□□□ -0.36
ZNF540-210ENST00000592533 ANKRD31Q8N7Z5 1873 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 ZBTB5O15062 677 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 RASSF7Q02833 373 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 LRRC41Q15345 812 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 CCDC181Q5TID7 509 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 CCDC65Q8IXS2 484 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 BMP2KQ9NSY1 1161 aaPredicted RBP12.8□□□□□ -0.36
ZNF540-210ENST00000592533 POLLQ9UGP5 575 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 GOLGA6CA6NDK9 693 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 GOLGA6DP0CG33 693 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 PPFIA1Q13136 1202 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 DPP8Q6V1X1 898 aaPredicted RBP12.8□□□□□ -0.36
ZNF540-210ENST00000592533 SND1Q7KZF4 910 aaKnown RBP eCLIP12.8□□□□□ -0.36
ZNF540-210ENST00000592533 MREGQ8N565 214 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 GANQ9H2C0 597 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 RBM12Q9NTZ6 932 aaKnown RBP12.8□□□□□ -0.36
ZNF540-210ENST00000592533 GOLGA6AQ9NYA3 693 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 PCDHA12Q9UN75 941 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 NRXN2Q9P2S2 1712 aa12.8□□□□□ -0.36
ZNF540-210ENST00000592533 TRAF5O00463 557 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 OPA1O60313 960 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 USP11P51784 963 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 UBE2SQ16763 222 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 CCDC40Q4G0X9 1142 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 DRC1Q96MC2 740 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 ZNF646O15015 1829 aaPredicted RBP12.79□□□□□ -0.36
ZNF540-210ENST00000592533 A6NNZ2 444 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 NCK2O43639 380 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 SHMT1P34896 483 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 TUBB8Q3ZCM7 444 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 C10orf76Q5T2E6 689 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 MEI1Q5TIA1 1274 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 DPY19L2P1Q6NXN4 242 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 C8orf74Q6P047 294 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 TMC4Q7Z404 712 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 SCFD1Q8WVM8 642 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 GDAP1L1Q96MZ0 367 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 CRAMP1Q96RY5 1269 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 LSM14BQ9BX40 385 aaKnown RBP12.79□□□□□ -0.36
ZNF540-210ENST00000592533 GPCPD1Q9NPB8 672 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 KLRG2A4D1S0 409 aaPredicted RBP12.79□□□□□ -0.36
ZNF540-210ENST00000592533 PLA2G4BP0C869 781 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 CORO7P57737 925 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 SKOR1P84550 965 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 ATP2B2Q01814 1243 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 APBA1Q02410 837 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 EIF1ADQ8N9N8 165 aaKnown RBP12.79□□□□□ -0.36
ZNF540-210ENST00000592533 C1orf131Q8NDD1 294 aaKnown RBP12.79□□□□□ -0.36
ZNF540-210ENST00000592533 CRYGNQ8WXF5 182 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
ZNF540-210ENST00000592533 TRERF1Q96PN7 1200 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 TANGO6Q9C0B7 1094 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 PLCB1Q9NQ66 1216 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 SERPINB13Q9UIV8 391 aa12.79□□□□□ -0.36
ZNF540-210ENST00000592533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.79□□□□□ -0.36
ZNF540-210ENST00000592533 CYP11B2P19099 503 aa12.78□□□□□ -0.36
ZNF540-210ENST00000592533 ANXA13P27216 316 aa12.78□□□□□ -0.36
ZNF540-210ENST00000592533 EMC10Q5UCC4 262 aa12.78□□□□□ -0.36
ZNF540-210ENST00000592533 IFT20Q8IY31 132 aa12.78□□□□□ -0.36
ZNF540-210ENST00000592533 FGFBP2Q9BYJ0 223 aa12.78□□□□□ -0.36
ZNF540-210ENST00000592533 PSTPIP2Q9H939 334 aa12.78□□□□□ -0.36
ZNF540-210ENST00000592533 DDX4Q9NQI0 724 aaKnown RBP12.78□□□□□ -0.36
ZNF540-210ENST00000592533 CXCR5P32302 372 aa12.78□□□□□ -0.36
ZNF540-210ENST00000592533 SLC12A3P55017 1021 aa12.78□□□□□ -0.36
ZNF540-210ENST00000592533 TDRD12Q587J7 1177 aaKnown RBP12.78□□□□□ -0.36
ZNF540-210ENST00000592533 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.78□□□□□ -0.36
ZNF540-210ENST00000592533 EHD4Q9H223 541 aa12.78□□□□□ -0.36
ZNF540-210ENST00000592533 RBBP6Q7Z6E9 1792 aaKnown RBP12.78□□□□□ -0.36
ZNF540-210ENST00000592533 TRIM66O15016 1216 aa12.77□□□□□ -0.36
ZNF540-210ENST00000592533 MYBP10242 640 aa12.77□□□□□ -0.36
ZNF540-210ENST00000592533 MAGEA9P43362 315 aa12.77□□□□□ -0.36
ZNF540-210ENST00000592533 POLR2FP61218 127 aaKnown RBP12.77□□□□□ -0.36
ZNF540-210ENST00000592533 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.77□□□□□ -0.36
ZNF540-210ENST00000592533 CD302Q8IX05 232 aa12.77□□□□□ -0.36
ZNF540-210ENST00000592533 SLFN12Q8IYM2 578 aa12.77□□□□□ -0.36
ZNF540-210ENST00000592533 TSEN2Q8NCE0 465 aaKnown RBP12.77□□□□□ -0.36
ZNF540-210ENST00000592533 NLRC4Q9NPP4 1024 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms